RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
RPA1-206ENST00000573994 ACYP1P07311 99 aa4.66□□□□□ -1.66
RPA1-206ENST00000573994 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
RPA1-206ENST00000573994 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
RPA1-206ENST00000573994 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
RPA1-206ENST00000573994 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
RPA1-206ENST00000573994 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
RPA1-206ENST00000573994 S4R3F8 94 aa4.62□□□□□ -1.67
RPA1-206ENST00000573994 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
RPA1-206ENST00000573994 CSAG1Q6PB30 78 aa4.61□□□□□ -1.67
RPA1-206ENST00000573994 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
RPA1-206ENST00000573994 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
RPA1-206ENST00000573994 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
RPA1-206ENST00000573994 ATP5EP2Q5VTU8 51 aa4.6□□□□□ -1.67
RPA1-206ENST00000573994 LCA10Q71F78 164 aa4.59□□□□□ -1.67
RPA1-206ENST00000573994 TRAV22A0A0B4J277 110 aa4.57□□□□□ -1.68
RPA1-206ENST00000573994 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
RPA1-206ENST00000573994 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
RPA1-206ENST00000573994 MT3P25713 68 aa4.56□□□□□ -1.68
RPA1-206ENST00000573994 ATOX1O00244 68 aa4.54□□□□□ -1.68
RPA1-206ENST00000573994 UQCRQO14949 82 aa4.54□□□□□ -1.68
RPA1-206ENST00000573994 HIST1H4AP62805 103 aaKnown RBP4.53□□□□□ -1.68
RPA1-206ENST00000573994 A0A087WVE0 104 aa4.51□□□□□ -1.69
RPA1-206ENST00000573994 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
RPA1-206ENST00000573994 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
RPA1-206ENST00000573994 H0Y9P7 68 aa4.49□□□□□ -1.69
RPA1-206ENST00000573994 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
RPA1-206ENST00000573994 MT1BP07438 61 aa4.48□□□□□ -1.69
RPA1-206ENST00000573994 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
RPA1-206ENST00000573994 Q5VV11 94 aa4.48□□□□□ -1.69
RPA1-206ENST00000573994 CRIPTQ9P021 101 aa4.48□□□□□ -1.69
RPA1-206ENST00000573994 A8MUN3 132 aa4.47□□□□□ -1.69
RPA1-206ENST00000573994 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
RPA1-206ENST00000573994 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
RPA1-206ENST00000573994 IMUPQ9GZP8 106 aa4.46□□□□□ -1.7
RPA1-206ENST00000573994 NDUFC1O43677 76 aa4.45□□□□□ -1.7
RPA1-206ENST00000573994 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
RPA1-206ENST00000573994 A6NN06 94 aa4.44□□□□□ -1.7
RPA1-206ENST00000573994 H0YAA0 97 aa4.43□□□□□ -1.7
RPA1-206ENST00000573994 MP68P56378 58 aa4.43□□□□□ -1.7
RPA1-206ENST00000573994 A0A1B0GV90 55 aa4.42□□□□□ -1.7
RPA1-206ENST00000573994 J3QR89 54 aa4.42□□□□□ -1.7
RPA1-206ENST00000573994 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
RPA1-206ENST00000573994 LINC00208Q96KT6 92 aa4.41□□□□□ -1.7
RPA1-206ENST00000573994 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
RPA1-206ENST00000573994 H3BPC8 53 aa4.39□□□□□ -1.71
RPA1-206ENST00000573994 NEBP20929 6669 aa4.37□□□□□ -1.71
RPA1-206ENST00000573994 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
RPA1-206ENST00000573994 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
RPA1-206ENST00000573994 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
RPA1-206ENST00000573994 SCGB1A1P11684 91 aa4.33□□□□□ -1.72
RPA1-206ENST00000573994 C20orf197Q8N268 126 aa4.3□□□□□ -1.72
RPA1-206ENST00000573994 DMAC1Q96GE9 116 aa4.29□□□□□ -1.72
RPA1-206ENST00000573994 MDN1Q9NU22 5596 aa4.28□□□□□ -1.72
RPA1-206ENST00000573994 KMT2DO14686 5537 aa4.27□□□□□ -1.73
RPA1-206ENST00000573994 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
RPA1-206ENST00000573994 P0C880 135 aa4.25□□□□□ -1.73
RPA1-206ENST00000573994 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
RPA1-206ENST00000573994 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
RPA1-206ENST00000573994 R4GN34 69 aa4.24□□□□□ -1.73
RPA1-206ENST00000573994 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
RPA1-206ENST00000573994 K7ERU9 68 aa4.22□□□□□ -1.73
RPA1-206ENST00000573994 M0QZ58 72 aa4.21□□□□□ -1.74
RPA1-206ENST00000573994 ACYP2P14621 99 aa4.21□□□□□ -1.74
RPA1-206ENST00000573994 MT1XP80297 61 aa4.21□□□□□ -1.74
RPA1-206ENST00000573994 MT-ATP8P03928 68 aa4.2□□□□□ -1.74
RPA1-206ENST00000573994 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
RPA1-206ENST00000573994 SPTSSBQ8NFR3 76 aa4.2□□□□□ -1.74
RPA1-206ENST00000573994 LINC01554Q52M75 96 aa4.17□□□□□ -1.74
RPA1-206ENST00000573994 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
RPA1-206ENST00000573994 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
RPA1-206ENST00000573994 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
RPA1-206ENST00000573994 KRTAP12-2P59991 146 aa4.1□□□□□ -1.75
RPA1-206ENST00000573994 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
RPA1-206ENST00000573994 SNURFQ9Y675 71 aa4.1□□□□□ -1.75
RPA1-206ENST00000573994 KRTAP8-1Q8IUC2 63 aa4.08□□□□□ -1.76
RPA1-206ENST00000573994 PCP4P48539 62 aa4.07□□□□□ -1.76
RPA1-206ENST00000573994 SPRR2EP22531 72 aa4.06□□□□□ -1.76
RPA1-206ENST00000573994 SPRR2BP35325 72 aa4.06□□□□□ -1.76
RPA1-206ENST00000573994 SPRR2AP35326 72 aa4.06□□□□□ -1.76
RPA1-206ENST00000573994 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
RPA1-206ENST00000573994 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
RPA1-206ENST00000573994 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
RPA1-206ENST00000573994 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
RPA1-206ENST00000573994 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
RPA1-206ENST00000573994 SEC61GP60059 68 aa3.94□□□□□ -1.78
RPA1-206ENST00000573994 SPRR2DP22532 72 aa3.93□□□□□ -1.78
RPA1-206ENST00000573994 COA5Q86WW8 74 aa3.93□□□□□ -1.78
RPA1-206ENST00000573994 COX7CP15954 63 aa3.91□□□□□ -1.78
RPA1-206ENST00000573994 SERP1Q9Y6X1 66 aa3.91□□□□□ -1.78
RPA1-206ENST00000573994 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
RPA1-206ENST00000573994 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
RPA1-206ENST00000573994 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
RPA1-206ENST00000573994 A0A0D9SG42 100 aa3.87□□□□□ -1.79
RPA1-206ENST00000573994 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
RPA1-206ENST00000573994 CYSTM1Q9H1C7 97 aa3.86□□□□□ -1.79
RPA1-206ENST00000573994 H7BZZ5 65 aa3.85□□□□□ -1.79
RPA1-206ENST00000573994 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
RPA1-206ENST00000573994 A0A1B0GU33 70 aa3.83□□□□□ -1.8
RPA1-206ENST00000573994 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms