RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 H0Y9P7 68 aa13.59□□□□□ -0.23
CTDNEP1-206ENST00000571409 KRTAP19-8Q3LI54 63 aa13.58□□□□□ -0.24
CTDNEP1-206ENST00000571409 ATOX1O00244 68 aa13.55□□□□□ -0.24
CTDNEP1-206ENST00000571409 A6NN06 94 aa13.51□□□□□ -0.25
CTDNEP1-206ENST00000571409 KRTAP6-3Q3LI67 103 aa13.5□□□□□ -0.25
CTDNEP1-206ENST00000571409 LINC00643Q86TS7 51 aa13.49□□□□□ -0.25
CTDNEP1-206ENST00000571409 NDUFC1O43677 76 aa13.4□□□□□ -0.26
CTDNEP1-206ENST00000571409 IMUPQ9GZP8 106 aa13.4□□□□□ -0.26
CTDNEP1-206ENST00000571409 CRIPTQ9P021 101 aa13.39□□□□□ -0.27
CTDNEP1-206ENST00000571409 LINC00208Q96KT6 92 aa13.36□□□□□ -0.27
CTDNEP1-206ENST00000571409 A8MUN3 132 aa13.33□□□□□ -0.28
CTDNEP1-206ENST00000571409 A0A1B0GV90 55 aa13.32□□□□□ -0.28
CTDNEP1-206ENST00000571409 KRTAP10-5P60370 271 aa13.32□□□□□ -0.28
CTDNEP1-206ENST00000571409 H0YAA0 97 aa13.29□□□□□ -0.28
CTDNEP1-206ENST00000571409 OCR1Q9BZK8 76 aa13.28□□□□□ -0.28
CTDNEP1-206ENST00000571409 MP68P56378 58 aa13.26□□□□□ -0.29
CTDNEP1-206ENST00000571409 ADM2Q7Z4H4 148 aa13.17□□□□□ -0.3
CTDNEP1-206ENST00000571409 J3QR89 54 aa13.08□□□□□ -0.32
CTDNEP1-206ENST00000571409 H3BPC8 53 aa13.05□□□□□ -0.32
CTDNEP1-206ENST00000571409 SCGB1A1P11684 91 aa12.98□□□□□ -0.33
CTDNEP1-206ENST00000571409 DMAC1Q96GE9 116 aa12.93□□□□□ -0.34
CTDNEP1-206ENST00000571409 MUC12Q9UKN1 5478 aa12.89□□□□□ -0.35
CTDNEP1-206ENST00000571409 NEBP20929 6669 aa12.86□□□□□ -0.35
CTDNEP1-206ENST00000571409 P0C880 135 aa12.86□□□□□ -0.35
CTDNEP1-206ENST00000571409 KRTAP5-9P26371 169 aa12.85□□□□□ -0.35
CTDNEP1-206ENST00000571409 R4GN34 69 aa12.85□□□□□ -0.35
CTDNEP1-206ENST00000571409 C20orf197Q8N268 126 aa12.83□□□□□ -0.36
CTDNEP1-206ENST00000571409 PLAC4Q8WY50 150 aa12.8□□□□□ -0.36
CTDNEP1-206ENST00000571409 PRO2289Q9P1D8 64 aa12.8□□□□□ -0.36
CTDNEP1-206ENST00000571409 MT1XP80297 61 aa12.75□□□□□ -0.37
CTDNEP1-206ENST00000571409 M0QZ58 72 aa12.74□□□□□ -0.37
CTDNEP1-206ENST00000571409 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
CTDNEP1-206ENST00000571409 TRAV7A0A075B6U4 112 aa12.66□□□□□ -0.38
CTDNEP1-206ENST00000571409 MT-ATP8P03928 68 aa12.65□□□□□ -0.38
CTDNEP1-206ENST00000571409 KMT2DO14686 5537 aa12.64□□□□□ -0.39
CTDNEP1-206ENST00000571409 ACYP2P14621 99 aa12.61□□□□□ -0.39
CTDNEP1-206ENST00000571409 SMIM20Q8N5G0 67 aa12.58□□□□□ -0.4
CTDNEP1-206ENST00000571409 LINC01554Q52M75 96 aa12.57□□□□□ -0.4
CTDNEP1-206ENST00000571409 MDN1Q9NU22 5596 aa12.55□□□□□ -0.4
CTDNEP1-206ENST00000571409 K7ERU9 68 aa12.54□□□□□ -0.4
CTDNEP1-206ENST00000571409 KRTAP20-1Q3LI63 56 aa12.54□□□□□ -0.4
CTDNEP1-206ENST00000571409 SPRR2FQ96RM1 72 aa12.48□□□□□ -0.41
CTDNEP1-206ENST00000571409 SPTSSBQ8NFR3 76 aa12.47□□□□□ -0.41
CTDNEP1-206ENST00000571409 KRTAP12-2P59991 146 aa12.45□□□□□ -0.42
CTDNEP1-206ENST00000571409 KRTAP8-1Q8IUC2 63 aa12.41□□□□□ -0.42
CTDNEP1-206ENST00000571409 CHKB-CPT1BH3BT56 60 aa12.39□□□□□ -0.43
CTDNEP1-206ENST00000571409 SNURFQ9Y675 71 aa12.37□□□□□ -0.43
CTDNEP1-206ENST00000571409 SPRR2EP22531 72 aa12.32□□□□□ -0.44
CTDNEP1-206ENST00000571409 SPRR2BP35325 72 aa12.32□□□□□ -0.44
CTDNEP1-206ENST00000571409 SPRR2AP35326 72 aa12.32□□□□□ -0.44
CTDNEP1-206ENST00000571409 KRTAP4-8A0A0G2JLE6 195 aa12.24□□□□□ -0.45
CTDNEP1-206ENST00000571409 KRTAP4-8Q9BYQ9 185 aa12.24□□□□□ -0.45
CTDNEP1-206ENST00000571409 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
CTDNEP1-206ENST00000571409 KRTAP2-3P0C7H8 128 aa12.19□□□□□ -0.46
CTDNEP1-206ENST00000571409 KRTAP2-4Q9BYR9 128 aa12.19□□□□□ -0.46
CTDNEP1-206ENST00000571409 KRTAP10-7P60409 375 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-206ENST00000571409 SERP2Q8N6R1 65 aa12.13□□□□□ -0.47
CTDNEP1-206ENST00000571409 LCE1AQ5T7P2 110 aa12.12□□□□□ -0.47
CTDNEP1-206ENST00000571409 KRTAP10-12P60413 245 aa12.11□□□□□ -0.47
CTDNEP1-206ENST00000571409 KRTAP13-4Q3LI77 160 aa11.98□□□□□ -0.49
CTDNEP1-206ENST00000571409 SPRR2DP22532 72 aa11.9□□□□□ -0.5
CTDNEP1-206ENST00000571409 COA5Q86WW8 74 aa11.89□□□□□ -0.51
CTDNEP1-206ENST00000571409 CAMK2N1Q7Z7J9 78 aa11.8□□□□□ -0.52
CTDNEP1-206ENST00000571409 KRTAP2-2Q9BYT5 123 aa11.8□□□□□ -0.52
CTDNEP1-206ENST00000571409 KRTAP2-1Q9BYU5 128 aa11.8□□□□□ -0.52
CTDNEP1-206ENST00000571409 COX7CP15954 63 aa11.72□□□□□ -0.53
CTDNEP1-206ENST00000571409 SEC61GP60059 68 aa11.71□□□□□ -0.53
CTDNEP1-206ENST00000571409 SERP1Q9Y6X1 66 aa11.7□□□□□ -0.54
CTDNEP1-206ENST00000571409 A0A0D9SG42 100 aa11.62□□□□□ -0.55
CTDNEP1-206ENST00000571409 H7BZZ5 65 aa11.58□□□□□ -0.56
CTDNEP1-206ENST00000571409 LCE3BQ5TA77 95 aa11.58□□□□□ -0.56
CTDNEP1-206ENST00000571409 CYSTM1Q9H1C7 97 aa11.58□□□□□ -0.56
CTDNEP1-206ENST00000571409 SPATA8Q6RVD6 105 aa11.57□□□□□ -0.56
CTDNEP1-206ENST00000571409 A0A1B0GU33 70 aa11.52□□□□□ -0.57
CTDNEP1-206ENST00000571409 SPINT4Q6UDR6 99 aa11.46□□□□□ -0.57
CTDNEP1-206ENST00000571409 KRTAP19-7Q3SYF9 63 aa11.4□□□□□ -0.58
CTDNEP1-206ENST00000571409 KRTAP12-1P59990 96 aa11.37□□□□□ -0.59
CTDNEP1-206ENST00000571409 MT1EP04732 61 aa11.3□□□□□ -0.6
CTDNEP1-206ENST00000571409 A0A1B0GU69 56 aa11.28□□□□□ -0.6
CTDNEP1-206ENST00000571409 LCE5AQ5TCM9 118 aa11.26□□□□□ -0.61
CTDNEP1-206ENST00000571409 ANAPC13Q9BS18 74 aa11.25□□□□□ -0.61
CTDNEP1-206ENST00000571409 KRTAP19-3Q7Z4W3 81 aa11.23□□□□□ -0.61
CTDNEP1-206ENST00000571409 SMIM26A0A096LP01 95 aa11.19□□□□□ -0.62
CTDNEP1-206ENST00000571409 A8MU10 97 aa11.12□□□□□ -0.63
CTDNEP1-206ENST00000571409 KRTAP19-5Q3LI72 72 aa11.11□□□□□ -0.63
CTDNEP1-206ENST00000571409 CCDC179H3BU77 68 aa11.04□□□□□ -0.64
CTDNEP1-206ENST00000571409 DSTQ03001 7570 aaKnown RBP11.03□□□□□ -0.64
CTDNEP1-206ENST00000571409 MT1GP13640 62 aa10.94□□□□□ -0.66
CTDNEP1-206ENST00000571409 ATP5EP56381 51 aaPredicted RBP10.93□□□□□ -0.66
CTDNEP1-206ENST00000571409 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
CTDNEP1-206ENST00000571409 C10orf95Q9H7T3 257 aa10.88□□□□□ -0.67
CTDNEP1-206ENST00000571409 PP632Q6XCG6 107 aa10.86□□□□□ -0.67
CTDNEP1-206ENST00000571409 TNP1P09430 55 aa10.85□□□□□ -0.67
CTDNEP1-206ENST00000571409 LCE3AQ5TA76 89 aa10.83□□□□□ -0.68
CTDNEP1-206ENST00000571409 MT1LQ93083 61 aa10.8□□□□□ -0.68
CTDNEP1-206ENST00000571409 KRTAP4-9Q9BYQ8 210 aa10.8□□□□□ -0.68
CTDNEP1-206ENST00000571409 LINC01558Q9Y6Z2 57 aa10.78□□□□□ -0.68
CTDNEP1-206ENST00000571409 MT1MQ8N339 61 aa10.77□□□□□ -0.69
CTDNEP1-206ENST00000571409 TMEM258P61165 79 aa10.6□□□□□ -0.71
CTDNEP1-206ENST00000571409 UQCR11O14957 56 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms