RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KRTAP9-8Q9BYQ0 159 aa7.15□□□□□ -1.26
COMMD4-225ENST00000569245 H7BZZ5 65 aa7.14□□□□□ -1.27
COMMD4-225ENST00000569245 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
COMMD4-225ENST00000569245 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
COMMD4-225ENST00000569245 A8MUN3 132 aa7.07□□□□□ -1.28
COMMD4-225ENST00000569245 MT2AP02795 61 aa7.07□□□□□ -1.28
COMMD4-225ENST00000569245 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
COMMD4-225ENST00000569245 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
COMMD4-225ENST00000569245 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
COMMD4-225ENST00000569245 USH2AO75445 5202 aa7.02□□□□□ -1.29
COMMD4-225ENST00000569245 MT1FP04733 61 aa7.01□□□□□ -1.29
COMMD4-225ENST00000569245 TMEM258P61165 79 aa7.01□□□□□ -1.29
COMMD4-225ENST00000569245 ATP5EP56381 51 aaPredicted RBP6.99□□□□□ -1.29
COMMD4-225ENST00000569245 ACYP2P14621 99 aa6.98□□□□□ -1.29
COMMD4-225ENST00000569245 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
COMMD4-225ENST00000569245 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
COMMD4-225ENST00000569245 S4R3F8 94 aa6.91□□□□□ -1.3
COMMD4-225ENST00000569245 LCE2BO14633 110 aa6.89□□□□□ -1.31
COMMD4-225ENST00000569245 LCA10Q71F78 164 aa6.88□□□□□ -1.31
COMMD4-225ENST00000569245 COA5Q86WW8 74 aa6.87□□□□□ -1.31
COMMD4-225ENST00000569245 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
COMMD4-225ENST00000569245 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
COMMD4-225ENST00000569245 CSAG1Q6PB30 78 aa6.8□□□□□ -1.32
COMMD4-225ENST00000569245 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
COMMD4-225ENST00000569245 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
COMMD4-225ENST00000569245 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
COMMD4-225ENST00000569245 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
COMMD4-225ENST00000569245 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
COMMD4-225ENST00000569245 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
COMMD4-225ENST00000569245 H0YAA0 97 aa6.65□□□□□ -1.34
COMMD4-225ENST00000569245 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
COMMD4-225ENST00000569245 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
COMMD4-225ENST00000569245 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
COMMD4-225ENST00000569245 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
COMMD4-225ENST00000569245 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
COMMD4-225ENST00000569245 LINC01558Q9Y6Z2 57 aa6.56□□□□□ -1.36
COMMD4-225ENST00000569245 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
COMMD4-225ENST00000569245 SEC61GP60059 68 aa6.53□□□□□ -1.36
COMMD4-225ENST00000569245 Q1T7F1 81 aa6.52□□□□□ -1.37
COMMD4-225ENST00000569245 V9GYY9 64 aa6.52□□□□□ -1.37
COMMD4-225ENST00000569245 A0A1B0GU69 56 aa6.5□□□□□ -1.37
COMMD4-225ENST00000569245 P0C880 135 aa6.49□□□□□ -1.37
COMMD4-225ENST00000569245 Q5VV11 94 aa6.49□□□□□ -1.37
COMMD4-225ENST00000569245 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
COMMD4-225ENST00000569245 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
COMMD4-225ENST00000569245 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.38
COMMD4-225ENST00000569245 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
COMMD4-225ENST00000569245 MT1BP07438 61 aa6.43□□□□□ -1.38
COMMD4-225ENST00000569245 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
COMMD4-225ENST00000569245 A6NN06 94 aa6.41□□□□□ -1.38
COMMD4-225ENST00000569245 A0A1B0GU33 70 aa6.38□□□□□ -1.39
COMMD4-225ENST00000569245 PSPHP1O15172 72 aa6.37□□□□□ -1.39
COMMD4-225ENST00000569245 M0QZ58 72 aa6.36□□□□□ -1.39
COMMD4-225ENST00000569245 R4GN34 69 aa6.35□□□□□ -1.39
COMMD4-225ENST00000569245 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
COMMD4-225ENST00000569245 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
COMMD4-225ENST00000569245 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
COMMD4-225ENST00000569245 UQCR11O14957 56 aa6.27□□□□□ -1.41
COMMD4-225ENST00000569245 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
COMMD4-225ENST00000569245 A6NED7 52 aa6.18□□□□□ -1.42
COMMD4-225ENST00000569245 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
COMMD4-225ENST00000569245 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
COMMD4-225ENST00000569245 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
COMMD4-225ENST00000569245 A0A0D9SG42 100 aa6.13□□□□□ -1.43
COMMD4-225ENST00000569245 A8MU10 97 aa6.13□□□□□ -1.43
COMMD4-225ENST00000569245 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
COMMD4-225ENST00000569245 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
COMMD4-225ENST00000569245 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
COMMD4-225ENST00000569245 NEBP20929 6669 aa6.06□□□□□ -1.44
COMMD4-225ENST00000569245 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
COMMD4-225ENST00000569245 MT1XP80297 61 aa6.06□□□□□ -1.44
COMMD4-225ENST00000569245 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
COMMD4-225ENST00000569245 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
COMMD4-225ENST00000569245 KMT2DO14686 5537 aa6□□□□□ -1.45
COMMD4-225ENST00000569245 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
COMMD4-225ENST00000569245 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
COMMD4-225ENST00000569245 K7ERS5 55 aa5.94□□□□□ -1.46
COMMD4-225ENST00000569245 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
COMMD4-225ENST00000569245 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
COMMD4-225ENST00000569245 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
COMMD4-225ENST00000569245 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
COMMD4-225ENST00000569245 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
COMMD4-225ENST00000569245 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
COMMD4-225ENST00000569245 SPRR2EP22531 72 aa5.79□□□□□ -1.48
COMMD4-225ENST00000569245 SPRR2BP35325 72 aa5.79□□□□□ -1.48
COMMD4-225ENST00000569245 SPRR2AP35326 72 aa5.79□□□□□ -1.48
COMMD4-225ENST00000569245 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
COMMD4-225ENST00000569245 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
COMMD4-225ENST00000569245 C10orf95Q9H7T3 257 aa5.75□□□□□ -1.49
COMMD4-225ENST00000569245 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
COMMD4-225ENST00000569245 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
COMMD4-225ENST00000569245 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
COMMD4-225ENST00000569245 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
COMMD4-225ENST00000569245 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
COMMD4-225ENST00000569245 ROMO1P60602 79 aa5.67□□□□□ -1.5
COMMD4-225ENST00000569245 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
COMMD4-225ENST00000569245 TNP1P09430 55 aa5.62□□□□□ -1.51
COMMD4-225ENST00000569245 SPRR2DP22532 72 aa5.6□□□□□ -1.51
COMMD4-225ENST00000569245 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
COMMD4-225ENST00000569245 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms