RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
GTF3C1-209ENST00000568569 HCG22E2RYF7 251 aa5.08□□□□□ -1.6
GTF3C1-209ENST00000568569 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
GTF3C1-209ENST00000568569 Q8N9L7 120 aa5.07□□□□□ -1.6
GTF3C1-209ENST00000568569 CXCL6P80162 114 aa5.06□□□□□ -1.6
GTF3C1-209ENST00000568569 C1orf64Q8NEQ6 169 aa5.06□□□□□ -1.6
GTF3C1-209ENST00000568569 BPY2O14599 106 aa5.05□□□□□ -1.6
GTF3C1-209ENST00000568569 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
GTF3C1-209ENST00000568569 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
GTF3C1-209ENST00000568569 GTF2H5Q6ZYL4 71 aa5.03□□□□□ -1.6
GTF3C1-209ENST00000568569 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
GTF3C1-209ENST00000568569 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
GTF3C1-209ENST00000568569 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
GTF3C1-209ENST00000568569 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
GTF3C1-209ENST00000568569 SPRR2DP22532 72 aa5.01□□□□□ -1.61
GTF3C1-209ENST00000568569 ETDBQ3ZM63 59 aa5.01□□□□□ -1.61
GTF3C1-209ENST00000568569 H3BS24 57 aa4.99□□□□□ -1.61
GTF3C1-209ENST00000568569 F8W1H4 67 aa4.97□□□□□ -1.61
GTF3C1-209ENST00000568569 UBL5Q9BZL1 73 aa4.96□□□□□ -1.62
GTF3C1-209ENST00000568569 MT1XP80297 61 aa4.95□□□□□ -1.62
GTF3C1-209ENST00000568569 A0A1B0GV90 55 aa4.93□□□□□ -1.62
GTF3C1-209ENST00000568569 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
GTF3C1-209ENST00000568569 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
GTF3C1-209ENST00000568569 A8MUN3 132 aa4.89□□□□□ -1.63
GTF3C1-209ENST00000568569 A0A087WVE0 104 aa4.88□□□□□ -1.63
GTF3C1-209ENST00000568569 H0YAA0 97 aa4.88□□□□□ -1.63
GTF3C1-209ENST00000568569 PLAC4Q8WY50 150 aa4.87□□□□□ -1.63
GTF3C1-209ENST00000568569 TP53AIP1Q9HCN2 124 aa4.86□□□□□ -1.63
GTF3C1-209ENST00000568569 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
GTF3C1-209ENST00000568569 FAM240AA0A1B0GVK7 77 aa4.85□□□□□ -1.63
GTF3C1-209ENST00000568569 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
GTF3C1-209ENST00000568569 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
GTF3C1-209ENST00000568569 NDUFC1O43677 76 aa4.82□□□□□ -1.64
GTF3C1-209ENST00000568569 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
GTF3C1-209ENST00000568569 ADM2Q7Z4H4 148 aa4.81□□□□□ -1.64
GTF3C1-209ENST00000568569 ACYP1P07311 99 aa4.8□□□□□ -1.64
GTF3C1-209ENST00000568569 ATP5EP2Q5VTU8 51 aa4.8□□□□□ -1.64
GTF3C1-209ENST00000568569 HIST1H4AP62805 103 aaKnown RBP4.77□□□□□ -1.65
GTF3C1-209ENST00000568569 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
GTF3C1-209ENST00000568569 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
GTF3C1-209ENST00000568569 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
GTF3C1-209ENST00000568569 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
GTF3C1-209ENST00000568569 R4GN34 69 aa4.73□□□□□ -1.65
GTF3C1-209ENST00000568569 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
GTF3C1-209ENST00000568569 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
GTF3C1-209ENST00000568569 H0Y9P7 68 aa4.68□□□□□ -1.66
GTF3C1-209ENST00000568569 M0QZ58 72 aa4.67□□□□□ -1.66
GTF3C1-209ENST00000568569 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
GTF3C1-209ENST00000568569 UQCRQO14949 82 aa4.65□□□□□ -1.67
GTF3C1-209ENST00000568569 P0C880 135 aa4.64□□□□□ -1.67
GTF3C1-209ENST00000568569 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
GTF3C1-209ENST00000568569 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
GTF3C1-209ENST00000568569 J3QR89 54 aa4.62□□□□□ -1.67
GTF3C1-209ENST00000568569 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
GTF3C1-209ENST00000568569 ATOX1O00244 68 aa4.6□□□□□ -1.67
GTF3C1-209ENST00000568569 MT-ATP8P03928 68 aa4.6□□□□□ -1.67
GTF3C1-209ENST00000568569 LINC00208Q96KT6 92 aa4.59□□□□□ -1.67
GTF3C1-209ENST00000568569 K7ERU9 68 aa4.53□□□□□ -1.68
GTF3C1-209ENST00000568569 MP68P56378 58 aa4.53□□□□□ -1.68
GTF3C1-209ENST00000568569 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
GTF3C1-209ENST00000568569 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
GTF3C1-209ENST00000568569 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
GTF3C1-209ENST00000568569 H3BPC8 53 aa4.46□□□□□ -1.7
GTF3C1-209ENST00000568569 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
GTF3C1-209ENST00000568569 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
GTF3C1-209ENST00000568569 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
GTF3C1-209ENST00000568569 PCP4P48539 62 aa4.44□□□□□ -1.7
GTF3C1-209ENST00000568569 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
GTF3C1-209ENST00000568569 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
GTF3C1-209ENST00000568569 MT1EP04732 61 aa4.42□□□□□ -1.7
GTF3C1-209ENST00000568569 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
GTF3C1-209ENST00000568569 MT4P47944 62 aa4.4□□□□□ -1.71
GTF3C1-209ENST00000568569 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.71
GTF3C1-209ENST00000568569 SNURFQ9Y675 71 aa4.4□□□□□ -1.71
GTF3C1-209ENST00000568569 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
GTF3C1-209ENST00000568569 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
GTF3C1-209ENST00000568569 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
GTF3C1-209ENST00000568569 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
GTF3C1-209ENST00000568569 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
GTF3C1-209ENST00000568569 MT1GP13640 62 aa4.31□□□□□ -1.72
GTF3C1-209ENST00000568569 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
GTF3C1-209ENST00000568569 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
GTF3C1-209ENST00000568569 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
GTF3C1-209ENST00000568569 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
GTF3C1-209ENST00000568569 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
GTF3C1-209ENST00000568569 ACYP2P14621 99 aa4.27□□□□□ -1.73
GTF3C1-209ENST00000568569 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
GTF3C1-209ENST00000568569 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
GTF3C1-209ENST00000568569 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
GTF3C1-209ENST00000568569 SPANXA2-OT1Q8N9U9 137 aa4.24□□□□□ -1.73
GTF3C1-209ENST00000568569 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
GTF3C1-209ENST00000568569 MT1MQ8N339 61 aa4.23□□□□□ -1.73
GTF3C1-209ENST00000568569 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
GTF3C1-209ENST00000568569 COX7CP15954 63 aa4.22□□□□□ -1.73
GTF3C1-209ENST00000568569 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
GTF3C1-209ENST00000568569 A0A0D9SG42 100 aa4.19□□□□□ -1.74
GTF3C1-209ENST00000568569 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
GTF3C1-209ENST00000568569 COA5Q86WW8 74 aa4.18□□□□□ -1.74
GTF3C1-209ENST00000568569 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
GTF3C1-209ENST00000568569 H7BZZ5 65 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms