RNA–Protein interactions for RNA: ENST00000567949.5

CTU2-210, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-210ENST00000567949 A0A1B0GU69 56 aa10.41□□□□□ -0.74
CTU2-210ENST00000567949 A6NED7 52 aa10.33□□□□□ -0.76
CTU2-210ENST00000567949 RBM12B-AS1Q9P1G2 102 aa10.32□□□□□ -0.76
CTU2-210ENST00000567949 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
CTU2-210ENST00000567949 LCA10Q71F78 164 aa10.29□□□□□ -0.76
CTU2-210ENST00000567949 S4R3F8 94 aa10.29□□□□□ -0.76
CTU2-210ENST00000567949 SEC61GP60059 68 aa10.27□□□□□ -0.76
CTU2-210ENST00000567949 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.76
CTU2-210ENST00000567949 HERC1Q15751 4861 aa10.22□□□□□ -0.77
CTU2-210ENST00000567949 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.78
CTU2-210ENST00000567949 CDC42SE1Q9NRR8 79 aa10.19□□□□□ -0.78
CTU2-210ENST00000567949 A8MU10 97 aa10.19□□□□□ -0.78
CTU2-210ENST00000567949 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
CTU2-210ENST00000567949 UQCR11O14957 56 aa10.14□□□□□ -0.79
CTU2-210ENST00000567949 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
CTU2-210ENST00000567949 MIR22HGQ0VDD5 57 aa10.05□□□□□ -0.8
CTU2-210ENST00000567949 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
CTU2-210ENST00000567949 A0A1B0GU33 70 aa10.03□□□□□ -0.8
CTU2-210ENST00000567949 CSAG1Q6PB30 78 aa10.02□□□□□ -0.81
CTU2-210ENST00000567949 KRTAP10-6P60371 365 aaPredicted RBP9.98□□□□□ -0.81
CTU2-210ENST00000567949 KRTAP19-2Q3LHN2 52 aa9.98□□□□□ -0.81
CTU2-210ENST00000567949 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
CTU2-210ENST00000567949 PMAIP1Q13794 54 aa9.97□□□□□ -0.81
CTU2-210ENST00000567949 H0YAA0 97 aa9.92□□□□□ -0.82
CTU2-210ENST00000567949 ADM2Q7Z4H4 148 aa9.88□□□□□ -0.83
CTU2-210ENST00000567949 P0C880 135 aa9.86□□□□□ -0.83
CTU2-210ENST00000567949 A6NN06 94 aa9.77□□□□□ -0.85
CTU2-210ENST00000567949 KTN1-AS1Q86SY8 53 aa9.76□□□□□ -0.85
CTU2-210ENST00000567949 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
CTU2-210ENST00000567949 MUC2Q02817 5179 aa9.74□□□□□ -0.85
CTU2-210ENST00000567949 UBR4Q5T4S7 5183 aa9.66□□□□□ -0.86
CTU2-210ENST00000567949 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
CTU2-210ENST00000567949 M0QZ58 72 aa9.61□□□□□ -0.87
CTU2-210ENST00000567949 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
CTU2-210ENST00000567949 A0A0D9SG42 100 aa9.58□□□□□ -0.88
CTU2-210ENST00000567949 K7ERS5 55 aa9.54□□□□□ -0.88
CTU2-210ENST00000567949 RNF213Q63HN8 5207 aa9.51□□□□□ -0.89
CTU2-210ENST00000567949 R4GN34 69 aa9.48□□□□□ -0.89
CTU2-210ENST00000567949 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
CTU2-210ENST00000567949 MT1HP80294 61 aa9.43□□□□□ -0.9
CTU2-210ENST00000567949 KRTAP12-1P59990 96 aa9.39□□□□□ -0.91
CTU2-210ENST00000567949 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
CTU2-210ENST00000567949 M0R2T5 61 aa9.35□□□□□ -0.91
CTU2-210ENST00000567949 SPINT4Q6UDR6 99 aa9.34□□□□□ -0.91
CTU2-210ENST00000567949 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
CTU2-210ENST00000567949 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
CTU2-210ENST00000567949 CRIPTQ9P021 101 aa9.31□□□□□ -0.92
CTU2-210ENST00000567949 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
CTU2-210ENST00000567949 ROMO1P60602 79 aa9.2□□□□□ -0.94
CTU2-210ENST00000567949 KRTAP9-8Q9BYQ0 159 aa9.12□□□□□ -0.95
CTU2-210ENST00000567949 MT2AP02795 61 aa9.11□□□□□ -0.95
CTU2-210ENST00000567949 MT1FP04733 61 aa9.07□□□□□ -0.96
CTU2-210ENST00000567949 SPRR2GQ9BYE4 73 aa9.06□□□□□ -0.96
CTU2-210ENST00000567949 KRTAP10-10P60014 251 aa9.05□□□□□ -0.96
CTU2-210ENST00000567949 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
CTU2-210ENST00000567949 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
CTU2-210ENST00000567949 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
CTU2-210ENST00000567949 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
CTU2-210ENST00000567949 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
CTU2-210ENST00000567949 PLAC4Q8WY50 150 aa8.82□□□□□ -1
CTU2-210ENST00000567949 KRTAP19-8Q3LI54 63 aa8.78□□□□□ -1
CTU2-210ENST00000567949 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
CTU2-210ENST00000567949 MT1BP07438 61 aa8.65□□□□□ -1.02
CTU2-210ENST00000567949 TNP1P09430 55 aa8.53□□□□□ -1.04
CTU2-210ENST00000567949 LCE2BO14633 110 aa8.49□□□□□ -1.05
CTU2-210ENST00000567949 MT1XP80297 61 aa8.43□□□□□ -1.06
CTU2-210ENST00000567949 KRTAP10-5P60370 271 aa8.42□□□□□ -1.06
CTU2-210ENST00000567949 PP632Q6XCG6 107 aa8.42□□□□□ -1.06
CTU2-210ENST00000567949 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
CTU2-210ENST00000567949 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
CTU2-210ENST00000567949 H3BS24 57 aa8.14□□□□□ -1.11
CTU2-210ENST00000567949 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
CTU2-210ENST00000567949 USH2AO75445 5202 aa8.12□□□□□ -1.11
CTU2-210ENST00000567949 KRTAP10-7P60409 375 aaPredicted RBP8.11□□□□□ -1.11
CTU2-210ENST00000567949 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
CTU2-210ENST00000567949 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
CTU2-210ENST00000567949 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
CTU2-210ENST00000567949 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
CTU2-210ENST00000567949 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
CTU2-210ENST00000567949 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
CTU2-210ENST00000567949 KRTAP19-6Q3LI70 58 aa7.9□□□□□ -1.15
CTU2-210ENST00000567949 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
CTU2-210ENST00000567949 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
CTU2-210ENST00000567949 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
CTU2-210ENST00000567949 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
CTU2-210ENST00000567949 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
CTU2-210ENST00000567949 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
CTU2-210ENST00000567949 KRTAP19-5Q3LI72 72 aa7.68□□□□□ -1.18
CTU2-210ENST00000567949 SPRR5A0A1B0GTR4 108 aa7.58□□□□□ -1.2
CTU2-210ENST00000567949 KRTAP9-6A0A140TA67 174 aa7.58□□□□□ -1.2
CTU2-210ENST00000567949 KMT2DO14686 5537 aa7.58□□□□□ -1.2
CTU2-210ENST00000567949 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.21
CTU2-210ENST00000567949 FCGBPQ9Y6R7 5405 aaPredicted RBP7.5□□□□□ -1.21
CTU2-210ENST00000567949 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
CTU2-210ENST00000567949 MT1EP04732 61 aa7.37□□□□□ -1.23
CTU2-210ENST00000567949 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
CTU2-210ENST00000567949 MT1LQ93083 61 aa7.26□□□□□ -1.25
CTU2-210ENST00000567949 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
CTU2-210ENST00000567949 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
CTU2-210ENST00000567949 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms