RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
VPS9D1-206ENST00000567379 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.51
VPS9D1-206ENST00000567379 V9GYY9 64 aa5.59□□□□□ -1.51
VPS9D1-206ENST00000567379 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
VPS9D1-206ENST00000567379 Q1T7F1 81 aa5.57□□□□□ -1.52
VPS9D1-206ENST00000567379 LPAP08519 4548 aa5.56□□□□□ -1.52
VPS9D1-206ENST00000567379 SPTSSBQ8NFR3 76 aa5.55□□□□□ -1.52
VPS9D1-206ENST00000567379 KRTAP3-3Q9BYR6 98 aa5.55□□□□□ -1.52
VPS9D1-206ENST00000567379 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
VPS9D1-206ENST00000567379 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
VPS9D1-206ENST00000567379 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
VPS9D1-206ENST00000567379 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
VPS9D1-206ENST00000567379 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
VPS9D1-206ENST00000567379 S4R3F8 94 aa5.47□□□□□ -1.53
VPS9D1-206ENST00000567379 MUC17Q685J3 4493 aa5.46□□□□□ -1.53
VPS9D1-206ENST00000567379 PSPHP1O15172 72 aa5.46□□□□□ -1.54
VPS9D1-206ENST00000567379 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
VPS9D1-206ENST00000567379 A0A1B0GU69 56 aa5.42□□□□□ -1.54
VPS9D1-206ENST00000567379 LCA10Q71F78 164 aa5.42□□□□□ -1.54
VPS9D1-206ENST00000567379 SEC61GP60059 68 aa5.41□□□□□ -1.54
VPS9D1-206ENST00000567379 Q5VV11 94 aa5.41□□□□□ -1.54
VPS9D1-206ENST00000567379 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
VPS9D1-206ENST00000567379 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
VPS9D1-206ENST00000567379 A6NED7 52 aa5.32□□□□□ -1.56
VPS9D1-206ENST00000567379 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
VPS9D1-206ENST00000567379 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
VPS9D1-206ENST00000567379 UQCR11O14957 56 aa5.27□□□□□ -1.57
VPS9D1-206ENST00000567379 A0A1B0GU33 70 aa5.24□□□□□ -1.57
VPS9D1-206ENST00000567379 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
VPS9D1-206ENST00000567379 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
VPS9D1-206ENST00000567379 ADM2Q7Z4H4 148 aa5.22□□□□□ -1.57
VPS9D1-206ENST00000567379 H0YAA0 97 aa5.21□□□□□ -1.58
VPS9D1-206ENST00000567379 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
VPS9D1-206ENST00000567379 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
VPS9D1-206ENST00000567379 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
VPS9D1-206ENST00000567379 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
VPS9D1-206ENST00000567379 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
VPS9D1-206ENST00000567379 P0C880 135 aa5.16□□□□□ -1.58
VPS9D1-206ENST00000567379 A8MU10 97 aa5.14□□□□□ -1.59
VPS9D1-206ENST00000567379 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
VPS9D1-206ENST00000567379 M0R2T5 61 aa5.09□□□□□ -1.59
VPS9D1-206ENST00000567379 M0QZ58 72 aa5.08□□□□□ -1.6
VPS9D1-206ENST00000567379 MT1HP80294 61 aa5.08□□□□□ -1.6
VPS9D1-206ENST00000567379 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
VPS9D1-206ENST00000567379 R4GN34 69 aa5.03□□□□□ -1.6
VPS9D1-206ENST00000567379 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
VPS9D1-206ENST00000567379 A0A0D9SG42 100 aa5.01□□□□□ -1.61
VPS9D1-206ENST00000567379 K7ERS5 55 aa5.01□□□□□ -1.61
VPS9D1-206ENST00000567379 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
VPS9D1-206ENST00000567379 CRIPTQ9P021 101 aa5□□□□□ -1.61
VPS9D1-206ENST00000567379 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
VPS9D1-206ENST00000567379 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
VPS9D1-206ENST00000567379 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
VPS9D1-206ENST00000567379 USH2AO75445 5202 aa4.95□□□□□ -1.62
VPS9D1-206ENST00000567379 A6NN06 94 aa4.95□□□□□ -1.62
VPS9D1-206ENST00000567379 LINC01554Q52M75 96 aa4.94□□□□□ -1.62
VPS9D1-206ENST00000567379 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
VPS9D1-206ENST00000567379 MT2AP02795 61 aa4.9□□□□□ -1.63
VPS9D1-206ENST00000567379 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
VPS9D1-206ENST00000567379 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
VPS9D1-206ENST00000567379 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
VPS9D1-206ENST00000567379 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
VPS9D1-206ENST00000567379 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
VPS9D1-206ENST00000567379 MT1FP04733 61 aa4.86□□□□□ -1.63
VPS9D1-206ENST00000567379 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
VPS9D1-206ENST00000567379 NEBP20929 6669 aa4.81□□□□□ -1.64
VPS9D1-206ENST00000567379 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
VPS9D1-206ENST00000567379 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
VPS9D1-206ENST00000567379 ROMO1P60602 79 aa4.77□□□□□ -1.65
VPS9D1-206ENST00000567379 LCE2BO14633 110 aa4.75□□□□□ -1.65
VPS9D1-206ENST00000567379 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
VPS9D1-206ENST00000567379 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
VPS9D1-206ENST00000567379 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
VPS9D1-206ENST00000567379 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
VPS9D1-206ENST00000567379 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
VPS9D1-206ENST00000567379 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
VPS9D1-206ENST00000567379 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
VPS9D1-206ENST00000567379 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
VPS9D1-206ENST00000567379 MT1BP07438 61 aa4.61□□□□□ -1.67
VPS9D1-206ENST00000567379 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
VPS9D1-206ENST00000567379 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
VPS9D1-206ENST00000567379 H3BS24 57 aa4.52□□□□□ -1.69
VPS9D1-206ENST00000567379 TNP1P09430 55 aa4.51□□□□□ -1.69
VPS9D1-206ENST00000567379 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
VPS9D1-206ENST00000567379 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
VPS9D1-206ENST00000567379 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
VPS9D1-206ENST00000567379 MT1XP80297 61 aa4.47□□□□□ -1.69
VPS9D1-206ENST00000567379 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
VPS9D1-206ENST00000567379 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
VPS9D1-206ENST00000567379 KMT2DO14686 5537 aa4.39□□□□□ -1.71
VPS9D1-206ENST00000567379 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
VPS9D1-206ENST00000567379 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
VPS9D1-206ENST00000567379 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
VPS9D1-206ENST00000567379 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
VPS9D1-206ENST00000567379 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
VPS9D1-206ENST00000567379 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
VPS9D1-206ENST00000567379 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
VPS9D1-206ENST00000567379 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
VPS9D1-206ENST00000567379 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
VPS9D1-206ENST00000567379 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 637.8 ms