RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KMT2DO14686 5537 aa8.26□□□□□ -1.09
ABCA3-204ENST00000566200 MDN1Q9NU22 5596 aa8.24□□□□□ -1.09
ABCA3-204ENST00000566200 UBL5Q9BZL1 73 aa8.23□□□□□ -1.09
ABCA3-204ENST00000566200 A0A087WVE0 104 aa8.19□□□□□ -1.1
ABCA3-204ENST00000566200 PRO0461Q9UI25 63 aa8.18□□□□□ -1.1
ABCA3-204ENST00000566200 TP53AIP1Q9HCN2 124 aa8.17□□□□□ -1.1
ABCA3-204ENST00000566200 CRIPTQ9P021 101 aa8.13□□□□□ -1.11
ABCA3-204ENST00000566200 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
ABCA3-204ENST00000566200 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
ABCA3-204ENST00000566200 ETDBQ3ZM63 59 aa8.05□□□□□ -1.12
ABCA3-204ENST00000566200 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
ABCA3-204ENST00000566200 KRTAP2-3P0C7H8 128 aa7.99□□□□□ -1.13
ABCA3-204ENST00000566200 KRTAP2-4Q9BYR9 128 aa7.99□□□□□ -1.13
ABCA3-204ENST00000566200 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
ABCA3-204ENST00000566200 H0YAA0 97 aa7.98□□□□□ -1.13
ABCA3-204ENST00000566200 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
ABCA3-204ENST00000566200 MT1XP80297 61 aa7.94□□□□□ -1.14
ABCA3-204ENST00000566200 FAM240AA0A1B0GVK7 77 aa7.92□□□□□ -1.14
ABCA3-204ENST00000566200 NDUFC1O43677 76 aa7.92□□□□□ -1.14
ABCA3-204ENST00000566200 SPRR2EP22531 72 aa7.91□□□□□ -1.14
ABCA3-204ENST00000566200 SPRR2BP35325 72 aa7.91□□□□□ -1.14
ABCA3-204ENST00000566200 SPRR2AP35326 72 aa7.91□□□□□ -1.14
ABCA3-204ENST00000566200 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
ABCA3-204ENST00000566200 A8MUN3 132 aa7.87□□□□□ -1.15
ABCA3-204ENST00000566200 ACYP1P07311 99 aa7.86□□□□□ -1.15
ABCA3-204ENST00000566200 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
ABCA3-204ENST00000566200 MT-ATP8P03928 68 aa7.85□□□□□ -1.15
ABCA3-204ENST00000566200 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
ABCA3-204ENST00000566200 H0Y9P7 68 aa7.82□□□□□ -1.16
ABCA3-204ENST00000566200 UQCRQO14949 82 aa7.81□□□□□ -1.16
ABCA3-204ENST00000566200 LCE1AQ5T7P2 110 aa7.81□□□□□ -1.16
ABCA3-204ENST00000566200 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
ABCA3-204ENST00000566200 ANAPC13Q9BS18 74 aa7.79□□□□□ -1.16
ABCA3-204ENST00000566200 ATOX1O00244 68 aa7.78□□□□□ -1.16
ABCA3-204ENST00000566200 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
ABCA3-204ENST00000566200 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
ABCA3-204ENST00000566200 HIST1H4AP62805 103 aaKnown RBP7.73□□□□□ -1.17
ABCA3-204ENST00000566200 KRTAP2-2Q9BYT5 123 aa7.72□□□□□ -1.17
ABCA3-204ENST00000566200 KRTAP2-1Q9BYU5 128 aa7.72□□□□□ -1.17
ABCA3-204ENST00000566200 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
ABCA3-204ENST00000566200 P0C880 135 aa7.71□□□□□ -1.18
ABCA3-204ENST00000566200 LINC00643Q86TS7 51 aa7.71□□□□□ -1.18
ABCA3-204ENST00000566200 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
ABCA3-204ENST00000566200 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
ABCA3-204ENST00000566200 R4GN34 69 aa7.68□□□□□ -1.18
ABCA3-204ENST00000566200 LINC00208Q96KT6 92 aa7.67□□□□□ -1.18
ABCA3-204ENST00000566200 SPRR2DP22532 72 aa7.64□□□□□ -1.19
ABCA3-204ENST00000566200 M0QZ58 72 aa7.62□□□□□ -1.19
ABCA3-204ENST00000566200 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
ABCA3-204ENST00000566200 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
ABCA3-204ENST00000566200 OCR1Q9BZK8 76 aa7.58□□□□□ -1.2
ABCA3-204ENST00000566200 KRTAP10-7P60409 375 aaPredicted RBP7.57□□□□□ -1.2
ABCA3-204ENST00000566200 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
ABCA3-204ENST00000566200 MP68P56378 58 aa7.53□□□□□ -1.2
ABCA3-204ENST00000566200 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
ABCA3-204ENST00000566200 COX7CP15954 63 aa7.52□□□□□ -1.21
ABCA3-204ENST00000566200 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
ABCA3-204ENST00000566200 RPS28P62857 69 aaKnown RBP7.52□□□□□ -1.21
ABCA3-204ENST00000566200 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
ABCA3-204ENST00000566200 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
ABCA3-204ENST00000566200 SERP2Q8N6R1 65 aa7.45□□□□□ -1.22
ABCA3-204ENST00000566200 TMEM258P61165 79 aa7.43□□□□□ -1.22
ABCA3-204ENST00000566200 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
ABCA3-204ENST00000566200 H3BPC8 53 aa7.39□□□□□ -1.23
ABCA3-204ENST00000566200 TRAV7A0A075B6U4 112 aa7.29□□□□□ -1.24
ABCA3-204ENST00000566200 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
ABCA3-204ENST00000566200 ACYP2P14621 99 aa7.2□□□□□ -1.26
ABCA3-204ENST00000566200 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
ABCA3-204ENST00000566200 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
ABCA3-204ENST00000566200 H7BZZ5 65 aa7.16□□□□□ -1.26
ABCA3-204ENST00000566200 DSTQ03001 7570 aaKnown RBP7.14□□□□□ -1.27
ABCA3-204ENST00000566200 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
ABCA3-204ENST00000566200 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
ABCA3-204ENST00000566200 GPR98Q8WXG9 6306 aa7.11□□□□□ -1.27
ABCA3-204ENST00000566200 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
ABCA3-204ENST00000566200 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
ABCA3-204ENST00000566200 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
ABCA3-204ENST00000566200 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
ABCA3-204ENST00000566200 CHKB-CPT1BH3BT56 60 aa7.04□□□□□ -1.28
ABCA3-204ENST00000566200 MT1EP04732 61 aa7.04□□□□□ -1.28
ABCA3-204ENST00000566200 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
ABCA3-204ENST00000566200 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
ABCA3-204ENST00000566200 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
ABCA3-204ENST00000566200 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
ABCA3-204ENST00000566200 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
ABCA3-204ENST00000566200 Q1T7F1 81 aa6.84□□□□□ -1.31
ABCA3-204ENST00000566200 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
ABCA3-204ENST00000566200 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
ABCA3-204ENST00000566200 V9GYY9 64 aa6.82□□□□□ -1.32
ABCA3-204ENST00000566200 A0A0D9SG42 100 aa6.81□□□□□ -1.32
ABCA3-204ENST00000566200 MT1GP13640 62 aa6.81□□□□□ -1.32
ABCA3-204ENST00000566200 HMCN1Q96RW7 5635 aa6.77□□□□□ -1.33
ABCA3-204ENST00000566200 MT4P47944 62 aa6.73□□□□□ -1.33
ABCA3-204ENST00000566200 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
ABCA3-204ENST00000566200 MT1MQ8N339 61 aa6.73□□□□□ -1.33
ABCA3-204ENST00000566200 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
ABCA3-204ENST00000566200 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
ABCA3-204ENST00000566200 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
ABCA3-204ENST00000566200 COA5Q86WW8 74 aa6.68□□□□□ -1.34
ABCA3-204ENST00000566200 MT1LQ93083 61 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms