RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 HERC1Q15751 4861 aa3.37□□□□□ -1.87
CHD9-217ENST00000565832 NDUFC1O43677 76 aa3.36□□□□□ -1.87
CHD9-217ENST00000565832 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
CHD9-217ENST00000565832 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
CHD9-217ENST00000565832 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
CHD9-217ENST00000565832 OXTP01178 125 aa3.35□□□□□ -1.87
CHD9-217ENST00000565832 CYP4F30PQ9H0H9 118 aa3.35□□□□□ -1.87
CHD9-217ENST00000565832 H3BPC8 53 aa3.34□□□□□ -1.87
CHD9-217ENST00000565832 A8MUU9 505 aa3.34□□□□□ -1.88
CHD9-217ENST00000565832 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.88
CHD9-217ENST00000565832 MUC2Q02817 5179 aa3.33□□□□□ -1.88
CHD9-217ENST00000565832 LOC101927531A0A1B0GV80 90 aa3.32□□□□□ -1.88
CHD9-217ENST00000565832 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
CHD9-217ENST00000565832 HRES1P13985 223 aa3.31□□□□□ -1.88
CHD9-217ENST00000565832 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
CHD9-217ENST00000565832 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
CHD9-217ENST00000565832 SPINK7P58062 85 aa3.28□□□□□ -1.88
CHD9-217ENST00000565832 C4orf26Q17RF5 130 aa3.28□□□□□ -1.88
CHD9-217ENST00000565832 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
CHD9-217ENST00000565832 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
CHD9-217ENST00000565832 ATP11AUNQ6ZP68 121 aa3.27□□□□□ -1.89
CHD9-217ENST00000565832 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
CHD9-217ENST00000565832 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
CHD9-217ENST00000565832 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
CHD9-217ENST00000565832 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
CHD9-217ENST00000565832 COA5Q86WW8 74 aa3.24□□□□□ -1.89
CHD9-217ENST00000565832 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
CHD9-217ENST00000565832 DMAC1Q96GE9 116 aa3.22□□□□□ -1.89
CHD9-217ENST00000565832 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
CHD9-217ENST00000565832 ACYP2P14621 99 aa3.21□□□□□ -1.9
CHD9-217ENST00000565832 SMIM26A0A096LP01 95 aa3.2□□□□□ -1.9
CHD9-217ENST00000565832 UBR4Q5T4S7 5183 aa3.19□□□□□ -1.9
CHD9-217ENST00000565832 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
CHD9-217ENST00000565832 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
CHD9-217ENST00000565832 PSPHP1O15172 72 aa3.17□□□□□ -1.9
CHD9-217ENST00000565832 CHKB-CPT1BH3BT56 60 aa3.16□□□□□ -1.9
CHD9-217ENST00000565832 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.9
CHD9-217ENST00000565832 Q1T7F1 81 aa3.14□□□□□ -1.91
CHD9-217ENST00000565832 A8MUN3 132 aa3.14□□□□□ -1.91
CHD9-217ENST00000565832 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
CHD9-217ENST00000565832 LCA10Q71F78 164 aa3.11□□□□□ -1.91
CHD9-217ENST00000565832 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
CHD9-217ENST00000565832 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CHD9-217ENST00000565832 Q5VV11 94 aa3.1□□□□□ -1.91
CHD9-217ENST00000565832 LINC01558Q9Y6Z2 57 aa3.09□□□□□ -1.91
CHD9-217ENST00000565832 RBM12B-AS1Q9P1G2 102 aa3.08□□□□□ -1.92
CHD9-217ENST00000565832 A8MU10 97 aa3.07□□□□□ -1.92
CHD9-217ENST00000565832 H1FX-AS1Q4G0G2 97 aa3.07□□□□□ -1.92
CHD9-217ENST00000565832 V9GYY9 64 aa3.07□□□□□ -1.92
CHD9-217ENST00000565832 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
CHD9-217ENST00000565832 S4R3F8 94 aa3.06□□□□□ -1.92
CHD9-217ENST00000565832 A0A1B0GU69 56 aa3.05□□□□□ -1.92
CHD9-217ENST00000565832 MT3P25713 68 aa3.05□□□□□ -1.92
CHD9-217ENST00000565832 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
CHD9-217ENST00000565832 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
CHD9-217ENST00000565832 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
CHD9-217ENST00000565832 A6NED7 52 aa3.02□□□□□ -1.93
CHD9-217ENST00000565832 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
CHD9-217ENST00000565832 SEC61GP60059 68 aa3□□□□□ -1.93
CHD9-217ENST00000565832 P0C880 135 aa2.99□□□□□ -1.93
CHD9-217ENST00000565832 KRTAP10-6P60371 365 aaPredicted RBP2.99□□□□□ -1.93
CHD9-217ENST00000565832 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
CHD9-217ENST00000565832 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
CHD9-217ENST00000565832 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
CHD9-217ENST00000565832 ADM2Q7Z4H4 148 aa2.97□□□□□ -1.93
CHD9-217ENST00000565832 A0A1B0GU33 70 aa2.97□□□□□ -1.93
CHD9-217ENST00000565832 UQCR11O14957 56 aa2.95□□□□□ -1.94
CHD9-217ENST00000565832 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
CHD9-217ENST00000565832 H0YAA0 97 aa2.94□□□□□ -1.94
CHD9-217ENST00000565832 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
CHD9-217ENST00000565832 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
CHD9-217ENST00000565832 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
CHD9-217ENST00000565832 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
CHD9-217ENST00000565832 A0A0D9SG42 100 aa2.9□□□□□ -1.94
CHD9-217ENST00000565832 MT1HP80294 61 aa2.9□□□□□ -1.94
CHD9-217ENST00000565832 M0R2T5 61 aa2.89□□□□□ -1.95
CHD9-217ENST00000565832 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
CHD9-217ENST00000565832 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
CHD9-217ENST00000565832 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CHD9-217ENST00000565832 M0QZ58 72 aa2.85□□□□□ -1.95
CHD9-217ENST00000565832 R4GN34 69 aa2.84□□□□□ -1.95
CHD9-217ENST00000565832 A6NN06 94 aa2.82□□□□□ -1.96
CHD9-217ENST00000565832 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
CHD9-217ENST00000565832 MT1FP04733 61 aa2.8□□□□□ -1.96
CHD9-217ENST00000565832 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
CHD9-217ENST00000565832 MT2AP02795 61 aa2.8□□□□□ -1.96
CHD9-217ENST00000565832 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
CHD9-217ENST00000565832 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
CHD9-217ENST00000565832 USH2AO75445 5202 aa2.77□□□□□ -1.97
CHD9-217ENST00000565832 K7ERS5 55 aa2.74□□□□□ -1.97
CHD9-217ENST00000565832 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
CHD9-217ENST00000565832 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
CHD9-217ENST00000565832 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
CHD9-217ENST00000565832 KRTAP10-12P60413 245 aa2.71□□□□□ -1.98
CHD9-217ENST00000565832 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
CHD9-217ENST00000565832 ROMO1P60602 79 aa2.67□□□□□ -1.98
CHD9-217ENST00000565832 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
CHD9-217ENST00000565832 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
CHD9-217ENST00000565832 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
CHD9-217ENST00000565832 MT1BP07438 61 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms