RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 H3BUX3 64 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 I3L2K1 104 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 WFDC13Q8IUB5 93 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 H3BUA1 57 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 WFDC10BQ8IUB3 73 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 DEFB105AQ8NG35 78 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 APLNQ9ULZ1 77 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 G3V318 75 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 KRTAP1-5Q9BYS1 174 aa1.64□□□□□ -2.15
CHD9-216ENST00000565803 K7EIM0 57 aa1.63□□□□□ -2.15
CHD9-216ENST00000565803 APELAP0DMC3 54 aa1.63□□□□□ -2.15
CHD9-216ENST00000565803 Q5VSD8 79 aa1.63□□□□□ -2.15
CHD9-216ENST00000565803 Q6ZRN7 208 aaPredicted RBP1.63□□□□□ -2.15
CHD9-216ENST00000565803 USMG5Q96IX5 58 aa1.63□□□□□ -2.15
CHD9-216ENST00000565803 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
CHD9-216ENST00000565803 GVQW2A0A096LPI5 108 aaPredicted RBP1.62□□□□□ -2.15
CHD9-216ENST00000565803 ANGP03950 147 aaKnown RBP1.62□□□□□ -2.15
CHD9-216ENST00000565803 SPINK13Q1W4C9 94 aa1.62□□□□□ -2.15
CHD9-216ENST00000565803 DEFB131BA0A096LNP1 70 aa1.62□□□□□ -2.15
CHD9-216ENST00000565803 M0R2N4 97 aa1.62□□□□□ -2.15
CHD9-216ENST00000565803 MT1HL1P0DM35 61 aa1.61□□□□□ -2.15
CHD9-216ENST00000565803 KLK9Q2XQG4 91 aa1.61□□□□□ -2.15
CHD9-216ENST00000565803 LINC00575Q6W349 94 aa1.61□□□□□ -2.15
CHD9-216ENST00000565803 DEFB104AQ8WTQ1 72 aa1.61□□□□□ -2.15
CHD9-216ENST00000565803 Q8IZM0 81 aa1.61□□□□□ -2.15
CHD9-216ENST00000565803 C6orf48Q9UBA6 75 aa1.61□□□□□ -2.15
CHD9-216ENST00000565803 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
CHD9-216ENST00000565803 IGFL1Q6UW32 110 aa1.6□□□□□ -2.15
CHD9-216ENST00000565803 CNFNQ9BYD5 112 aa1.6□□□□□ -2.15
CHD9-216ENST00000565803 LINC01546A6NGU7 62 aa1.6□□□□□ -2.15
CHD9-216ENST00000565803 C10orf99Q6UWK7 81 aa1.59□□□□□ -2.15
CHD9-216ENST00000565803 NDUFA1O15239 70 aa1.59□□□□□ -2.15
CHD9-216ENST00000565803 RHPN1-AS1Q9BWJ2 59 aa1.59□□□□□ -2.15
CHD9-216ENST00000565803 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.16
CHD9-216ENST00000565803 ANAPC11Q9NYG5 84 aa1.58□□□□□ -2.16
CHD9-216ENST00000565803 KRTAP13-2Q52LG2 175 aa1.57□□□□□ -2.16
CHD9-216ENST00000565803 Q6ZSA8 131 aa1.57□□□□□ -2.16
CHD9-216ENST00000565803 MRPL34Q9BQ48 92 aaKnown RBP1.57□□□□□ -2.16
CHD9-216ENST00000565803 KRTAP2-2Q9BYT5 123 aa1.57□□□□□ -2.16
CHD9-216ENST00000565803 TOMM7Q9P0U1 55 aa1.57□□□□□ -2.16
CHD9-216ENST00000565803 DEFB136Q30KP8 78 aa1.57□□□□□ -2.16
CHD9-216ENST00000565803 LRP1Q07954 4544 aaKnown RBP1.57□□□□□ -2.16
CHD9-216ENST00000565803 RPL39P62891 51 aaKnown RBP1.57□□□□□ -2.16
CHD9-216ENST00000565803 MT3P25713 68 aa1.56□□□□□ -2.16
CHD9-216ENST00000565803 PRO0255Q9UI72 69 aa1.56□□□□□ -2.16
CHD9-216ENST00000565803 TP53AIP1Q9HCN2 124 aa1.55□□□□□ -2.16
CHD9-216ENST00000565803 DEFB131AP59861 70 aa1.55□□□□□ -2.16
CHD9-216ENST00000565803 LRP2P98164 4655 aa1.55□□□□□ -2.16
CHD9-216ENST00000565803 RPL37P61927 97 aaKnown RBP1.55□□□□□ -2.16
CHD9-216ENST00000565803 RPL39LQ96EH5 51 aaKnown RBP1.55□□□□□ -2.16
CHD9-216ENST00000565803 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
CHD9-216ENST00000565803 K7EQZ3 153 aa1.54□□□□□ -2.16
CHD9-216ENST00000565803 POLR2KP53803 58 aaKnown RBP1.54□□□□□ -2.16
CHD9-216ENST00000565803 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
CHD9-216ENST00000565803 A8MTW9 85 aa1.53□□□□□ -2.16
CHD9-216ENST00000565803 M0QY20 66 aa1.53□□□□□ -2.16
CHD9-216ENST00000565803 HTN1P15515 57 aa1.53□□□□□ -2.16
CHD9-216ENST00000565803 PRLHP81277 87 aa1.53□□□□□ -2.16
CHD9-216ENST00000565803 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
CHD9-216ENST00000565803 NEBP20929 6669 aa1.53□□□□□ -2.16
CHD9-216ENST00000565803 DEFB1P60022 68 aa1.52□□□□□ -2.17
CHD9-216ENST00000565803 SMR3BP02814 79 aaPredicted RBP1.51□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP10-8P60410 259 aa1.5□□□□□ -2.17
CHD9-216ENST00000565803 SPINK1P00995 79 aa1.5□□□□□ -2.17
CHD9-216ENST00000565803 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
CHD9-216ENST00000565803 DEFB135Q30KP9 77 aa1.49□□□□□ -2.17
CHD9-216ENST00000565803 NOP10Q9NPE3 64 aaKnown RBP1.49□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP1-4P0C5Y4 121 aa1.48□□□□□ -2.17
CHD9-216ENST00000565803 COX6A2Q02221 97 aa1.48□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
CHD9-216ENST00000565803 DEFB130BP0DP73 79 aa1.48□□□□□ -2.17
CHD9-216ENST00000565803 DEFB130AP0DP74 79 aa1.48□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP10-1P60331 282 aa1.48□□□□□ -2.17
CHD9-216ENST00000565803 SPART-AS1P0CW21 52 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 COX6B2Q6YFQ2 88 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
CHD9-216ENST00000565803 HTN3P15516 51 aa1.46□□□□□ -2.18
CHD9-216ENST00000565803 DEFB4AO15263 64 aa1.45□□□□□ -2.18
CHD9-216ENST00000565803 LCE1FQ5T754 118 aa1.45□□□□□ -2.18
CHD9-216ENST00000565803 H0YAA0 97 aa1.45□□□□□ -2.18
CHD9-216ENST00000565803 KRTAP13-4Q3LI77 160 aa1.45□□□□□ -2.18
CHD9-216ENST00000565803 USH2AO75445 5202 aa1.45□□□□□ -2.18
CHD9-216ENST00000565803 H3BNG1 76 aa1.45□□□□□ -2.18
CHD9-216ENST00000565803 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
CHD9-216ENST00000565803 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
CHD9-216ENST00000565803 A0A096LPF7 62 aa1.44□□□□□ -2.18
CHD9-216ENST00000565803 KRTAP19-6Q3LI70 58 aa1.44□□□□□ -2.18
CHD9-216ENST00000565803 KRTAP19-2Q3LHN2 52 aa1.43□□□□□ -2.18
CHD9-216ENST00000565803 FLGP20930 4061 aaPredicted RBP1.43□□□□□ -2.18
CHD9-216ENST00000565803 A0A0D9SG42 100 aa1.42□□□□□ -2.18
CHD9-216ENST00000565803 KRTAP10-6P60371 365 aaPredicted RBP1.42□□□□□ -2.18
CHD9-216ENST00000565803 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
CHD9-216ENST00000565803 SPRR1AP35321 89 aa1.41□□□□□ -2.18
CHD9-216ENST00000565803 LINC01556Q5JQF7 62 aa1.41□□□□□ -2.18
CHD9-216ENST00000565803 SPRR1BP22528 89 aa1.4□□□□□ -2.19
CHD9-216ENST00000565803 LCE1EQ5T753 118 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms