RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 NEBP20929 6669 aa8.45□□□□□ -1.06
SYNGR3-204ENST00000564642 KRTAP19-6Q3LI70 58 aa8.42□□□□□ -1.06
SYNGR3-204ENST00000564642 J3QR89 54 aa8.41□□□□□ -1.06
SYNGR3-204ENST00000564642 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
SYNGR3-204ENST00000564642 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
SYNGR3-204ENST00000564642 MP68P56378 58 aa8.34□□□□□ -1.07
SYNGR3-204ENST00000564642 OCR1Q9BZK8 76 aa8.33□□□□□ -1.08
SYNGR3-204ENST00000564642 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
SYNGR3-204ENST00000564642 NDUFC1O43677 76 aa8.29□□□□□ -1.08
SYNGR3-204ENST00000564642 A8MUN3 132 aa8.28□□□□□ -1.08
SYNGR3-204ENST00000564642 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
SYNGR3-204ENST00000564642 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
SYNGR3-204ENST00000564642 SCGB1A1P11684 91 aa8.25□□□□□ -1.09
SYNGR3-204ENST00000564642 Q5VV11 94 aa8.23□□□□□ -1.09
SYNGR3-204ENST00000564642 H3BPC8 53 aa8.21□□□□□ -1.1
SYNGR3-204ENST00000564642 KRTAP19-8Q3LI54 63 aa8.19□□□□□ -1.1
SYNGR3-204ENST00000564642 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
SYNGR3-204ENST00000564642 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
SYNGR3-204ENST00000564642 MT1BP07438 61 aa8.18□□□□□ -1.1
SYNGR3-204ENST00000564642 H0YAA0 97 aa8.16□□□□□ -1.1
SYNGR3-204ENST00000564642 A6NN06 94 aa8.11□□□□□ -1.11
SYNGR3-204ENST00000564642 K7ERU9 68 aa8.1□□□□□ -1.11
SYNGR3-204ENST00000564642 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
SYNGR3-204ENST00000564642 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
SYNGR3-204ENST00000564642 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
SYNGR3-204ENST00000564642 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
SYNGR3-204ENST00000564642 KRTAP10-5P60370 271 aa8□□□□□ -1.13
SYNGR3-204ENST00000564642 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
SYNGR3-204ENST00000564642 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
SYNGR3-204ENST00000564642 KMT2DO14686 5537 aa7.93□□□□□ -1.14
SYNGR3-204ENST00000564642 ACYP2P14621 99 aa7.92□□□□□ -1.14
SYNGR3-204ENST00000564642 KRTAP2-3P0C7H8 128 aa7.91□□□□□ -1.14
SYNGR3-204ENST00000564642 KRTAP2-4Q9BYR9 128 aa7.91□□□□□ -1.14
SYNGR3-204ENST00000564642 R4GN34 69 aa7.9□□□□□ -1.14
SYNGR3-204ENST00000564642 P0C880 135 aa7.89□□□□□ -1.15
SYNGR3-204ENST00000564642 M0QZ58 72 aa7.83□□□□□ -1.16
SYNGR3-204ENST00000564642 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
SYNGR3-204ENST00000564642 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
SYNGR3-204ENST00000564642 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
SYNGR3-204ENST00000564642 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
SYNGR3-204ENST00000564642 MDN1Q9NU22 5596 aa7.79□□□□□ -1.16
SYNGR3-204ENST00000564642 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
SYNGR3-204ENST00000564642 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
SYNGR3-204ENST00000564642 GPR98Q8WXG9 6306 aa7.75□□□□□ -1.17
SYNGR3-204ENST00000564642 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
SYNGR3-204ENST00000564642 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
SYNGR3-204ENST00000564642 SPANXA2-OT1Q8N9U9 137 aa7.7□□□□□ -1.18
SYNGR3-204ENST00000564642 MT1XP80297 61 aa7.69□□□□□ -1.18
SYNGR3-204ENST00000564642 KRTAP5-9P26371 169 aa7.64□□□□□ -1.19
SYNGR3-204ENST00000564642 KRTAP2-2Q9BYT5 123 aa7.6□□□□□ -1.19
SYNGR3-204ENST00000564642 KRTAP2-1Q9BYU5 128 aa7.6□□□□□ -1.19
SYNGR3-204ENST00000564642 COX7CP15954 63 aa7.52□□□□□ -1.21
SYNGR3-204ENST00000564642 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
SYNGR3-204ENST00000564642 COA5Q86WW8 74 aa7.49□□□□□ -1.21
SYNGR3-204ENST00000564642 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
SYNGR3-204ENST00000564642 SPRR2FQ96RM1 72 aa7.44□□□□□ -1.22
SYNGR3-204ENST00000564642 SEC61GP60059 68 aa7.4□□□□□ -1.22
SYNGR3-204ENST00000564642 KRTAP13-4Q3LI77 160 aa7.38□□□□□ -1.23
SYNGR3-204ENST00000564642 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
SYNGR3-204ENST00000564642 H7BZZ5 65 aa7.37□□□□□ -1.23
SYNGR3-204ENST00000564642 SPRR2EP22531 72 aa7.36□□□□□ -1.23
SYNGR3-204ENST00000564642 SPRR2BP35325 72 aa7.36□□□□□ -1.23
SYNGR3-204ENST00000564642 SPRR2AP35326 72 aa7.36□□□□□ -1.23
SYNGR3-204ENST00000564642 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
SYNGR3-204ENST00000564642 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
SYNGR3-204ENST00000564642 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
SYNGR3-204ENST00000564642 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
SYNGR3-204ENST00000564642 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
SYNGR3-204ENST00000564642 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
SYNGR3-204ENST00000564642 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
SYNGR3-204ENST00000564642 A0A1B0GU33 70 aa7.23□□□□□ -1.25
SYNGR3-204ENST00000564642 A0A0D9SG42 100 aa7.22□□□□□ -1.25
SYNGR3-204ENST00000564642 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
SYNGR3-204ENST00000564642 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
SYNGR3-204ENST00000564642 A0A1B0GU69 56 aa7.14□□□□□ -1.27
SYNGR3-204ENST00000564642 SPRR2DP22532 72 aa7.13□□□□□ -1.27
SYNGR3-204ENST00000564642 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
SYNGR3-204ENST00000564642 CCDC179H3BU77 68 aa7.12□□□□□ -1.27
SYNGR3-204ENST00000564642 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
SYNGR3-204ENST00000564642 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
SYNGR3-204ENST00000564642 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
SYNGR3-204ENST00000564642 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
SYNGR3-204ENST00000564642 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
SYNGR3-204ENST00000564642 A8MU10 97 aa6.94□□□□□ -1.3
SYNGR3-204ENST00000564642 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
SYNGR3-204ENST00000564642 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
SYNGR3-204ENST00000564642 TMEM258P61165 79 aa6.87□□□□□ -1.31
SYNGR3-204ENST00000564642 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
SYNGR3-204ENST00000564642 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
SYNGR3-204ENST00000564642 MT1EP04732 61 aa6.81□□□□□ -1.32
SYNGR3-204ENST00000564642 PCP4P48539 62 aa6.8□□□□□ -1.32
SYNGR3-204ENST00000564642 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
SYNGR3-204ENST00000564642 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
SYNGR3-204ENST00000564642 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
SYNGR3-204ENST00000564642 TNP1P09430 55 aa6.73□□□□□ -1.33
SYNGR3-204ENST00000564642 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
SYNGR3-204ENST00000564642 UQCR11O14957 56 aa6.72□□□□□ -1.33
SYNGR3-204ENST00000564642 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
SYNGR3-204ENST00000564642 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
SYNGR3-204ENST00000564642 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 240.7 ms