RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 IGKV2-30P06310 120 aa9.37□□□□□ -0.91
NME3-207ENST00000564628 CCDC179H3BU77 68 aa9.36□□□□□ -0.91
NME3-207ENST00000564628 MT1FP04733 61 aa9.36□□□□□ -0.91
NME3-207ENST00000564628 SNURFQ9Y675 71 aa9.36□□□□□ -0.91
NME3-207ENST00000564628 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
NME3-207ENST00000564628 C7orf65Q6ZTY9 151 aa9.35□□□□□ -0.91
NME3-207ENST00000564628 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
NME3-207ENST00000564628 NDUFC1O43677 76 aa9.33□□□□□ -0.92
NME3-207ENST00000564628 KRTAP9-3Q9BYQ3 159 aa9.33□□□□□ -0.92
NME3-207ENST00000564628 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
NME3-207ENST00000564628 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
NME3-207ENST00000564628 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
NME3-207ENST00000564628 H7BZZ5 65 aa9.19□□□□□ -0.94
NME3-207ENST00000564628 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
NME3-207ENST00000564628 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
NME3-207ENST00000564628 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
NME3-207ENST00000564628 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
NME3-207ENST00000564628 TMEM258P61165 79 aa9.11□□□□□ -0.95
NME3-207ENST00000564628 C4orf26Q17RF5 130 aa9.1□□□□□ -0.95
NME3-207ENST00000564628 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
NME3-207ENST00000564628 A8MUN3 132 aa9.05□□□□□ -0.96
NME3-207ENST00000564628 ACYP2P14621 99 aa9.01□□□□□ -0.97
NME3-207ENST00000564628 DMAC1Q96GE9 116 aa9.01□□□□□ -0.97
NME3-207ENST00000564628 KRTAP3-1Q9BYR8 98 aa8.99□□□□□ -0.97
NME3-207ENST00000564628 KRTAP6-3Q3LI67 103 aa8.97□□□□□ -0.97
NME3-207ENST00000564628 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
NME3-207ENST00000564628 S4R3F8 94 aa8.84□□□□□ -0.99
NME3-207ENST00000564628 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
NME3-207ENST00000564628 COA5Q86WW8 74 aa8.82□□□□□ -1
NME3-207ENST00000564628 LCA10Q71F78 164 aa8.8□□□□□ -1
NME3-207ENST00000564628 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
NME3-207ENST00000564628 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
NME3-207ENST00000564628 NEBP20929 6669 aa8.74□□□□□ -1.01
NME3-207ENST00000564628 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
NME3-207ENST00000564628 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
NME3-207ENST00000564628 MUC12Q9UKN1 5478 aa8.59□□□□□ -1.03
NME3-207ENST00000564628 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
NME3-207ENST00000564628 A6NN06 94 aa8.55□□□□□ -1.04
NME3-207ENST00000564628 V9GYY9 64 aa8.52□□□□□ -1.05
NME3-207ENST00000564628 SPRR2GQ9BYE4 73 aa8.5□□□□□ -1.05
NME3-207ENST00000564628 SEC61GP60059 68 aa8.49□□□□□ -1.05
NME3-207ENST00000564628 KRTAP20-1Q3LI63 56 aa8.49□□□□□ -1.05
NME3-207ENST00000564628 H0YAA0 97 aa8.48□□□□□ -1.05
NME3-207ENST00000564628 MT1BP07438 61 aa8.48□□□□□ -1.05
NME3-207ENST00000564628 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.06
NME3-207ENST00000564628 Q1T7F1 81 aa8.45□□□□□ -1.06
NME3-207ENST00000564628 Q5VV11 94 aa8.45□□□□□ -1.06
NME3-207ENST00000564628 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
NME3-207ENST00000564628 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
NME3-207ENST00000564628 A0A1B0GU69 56 aa8.41□□□□□ -1.06
NME3-207ENST00000564628 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
NME3-207ENST00000564628 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
NME3-207ENST00000564628 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
NME3-207ENST00000564628 ADM2Q7Z4H4 148 aa8.36□□□□□ -1.07
NME3-207ENST00000564628 KMT2DO14686 5537 aa8.33□□□□□ -1.08
NME3-207ENST00000564628 MDN1Q9NU22 5596 aa8.31□□□□□ -1.08
NME3-207ENST00000564628 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
NME3-207ENST00000564628 PSPHP1O15172 72 aa8.26□□□□□ -1.09
NME3-207ENST00000564628 P0C880 135 aa8.22□□□□□ -1.09
NME3-207ENST00000564628 A0A1B0GU33 70 aa8.21□□□□□ -1.1
NME3-207ENST00000564628 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
NME3-207ENST00000564628 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
NME3-207ENST00000564628 M0QZ58 72 aa8.14□□□□□ -1.11
NME3-207ENST00000564628 UQCR11O14957 56 aa8.14□□□□□ -1.11
NME3-207ENST00000564628 R4GN34 69 aa8.12□□□□□ -1.11
NME3-207ENST00000564628 A6NED7 52 aa8.06□□□□□ -1.12
NME3-207ENST00000564628 SPRR2FQ96RM1 72 aa8.01□□□□□ -1.13
NME3-207ENST00000564628 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
NME3-207ENST00000564628 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
NME3-207ENST00000564628 SPRR2EP22531 72 aa7.99□□□□□ -1.13
NME3-207ENST00000564628 SPRR2BP35325 72 aa7.99□□□□□ -1.13
NME3-207ENST00000564628 SPRR2AP35326 72 aa7.99□□□□□ -1.13
NME3-207ENST00000564628 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.14
NME3-207ENST00000564628 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
NME3-207ENST00000564628 MT1XP80297 61 aa7.92□□□□□ -1.14
NME3-207ENST00000564628 PRO2289Q9P1D8 64 aa7.92□□□□□ -1.14
NME3-207ENST00000564628 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
NME3-207ENST00000564628 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
NME3-207ENST00000564628 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
NME3-207ENST00000564628 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
NME3-207ENST00000564628 A0A0D9SG42 100 aa7.87□□□□□ -1.15
NME3-207ENST00000564628 LCE1AQ5T7P2 110 aa7.85□□□□□ -1.15
NME3-207ENST00000564628 KRTAP8-1Q8IUC2 63 aa7.85□□□□□ -1.15
NME3-207ENST00000564628 A8MU10 97 aa7.83□□□□□ -1.16
NME3-207ENST00000564628 BRK1Q8WUW1 75 aa7.8□□□□□ -1.16
NME3-207ENST00000564628 K7ERS5 55 aa7.78□□□□□ -1.16
NME3-207ENST00000564628 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
NME3-207ENST00000564628 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
NME3-207ENST00000564628 SPRR2DP22532 72 aa7.73□□□□□ -1.17
NME3-207ENST00000564628 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
NME3-207ENST00000564628 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
NME3-207ENST00000564628 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
NME3-207ENST00000564628 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
NME3-207ENST00000564628 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
NME3-207ENST00000564628 PRO0628Q9UI54 55 aa7.56□□□□□ -1.2
NME3-207ENST00000564628 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
NME3-207ENST00000564628 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
NME3-207ENST00000564628 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
NME3-207ENST00000564628 GPR98Q8WXG9 6306 aa7.38□□□□□ -1.23
NME3-207ENST00000564628 ROMO1P60602 79 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms