RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 LCA10Q71F78 164 aa6.25□□□□□ -1.41
CLK3-213ENST00000563842 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
CLK3-213ENST00000563842 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
CLK3-213ENST00000563842 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
CLK3-213ENST00000563842 MP68P56378 58 aa6.21□□□□□ -1.42
CLK3-213ENST00000563842 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
CLK3-213ENST00000563842 LINC00208Q96KT6 92 aa6.19□□□□□ -1.42
CLK3-213ENST00000563842 OCR1Q9BZK8 76 aa6.19□□□□□ -1.42
CLK3-213ENST00000563842 A8MUN3 132 aa6.16□□□□□ -1.42
CLK3-213ENST00000563842 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
CLK3-213ENST00000563842 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
CLK3-213ENST00000563842 H3BPC8 53 aa6.14□□□□□ -1.43
CLK3-213ENST00000563842 NDUFC1O43677 76 aa6.12□□□□□ -1.43
CLK3-213ENST00000563842 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
CLK3-213ENST00000563842 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
CLK3-213ENST00000563842 NEBP20929 6669 aa6.12□□□□□ -1.43
CLK3-213ENST00000563842 K7ERU9 68 aa6.11□□□□□ -1.43
CLK3-213ENST00000563842 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
CLK3-213ENST00000563842 IMUPQ9GZP8 106 aa6.11□□□□□ -1.43
CLK3-213ENST00000563842 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
CLK3-213ENST00000563842 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
CLK3-213ENST00000563842 H0YAA0 97 aa6.04□□□□□ -1.44
CLK3-213ENST00000563842 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
CLK3-213ENST00000563842 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
CLK3-213ENST00000563842 Q5VV11 94 aa6.02□□□□□ -1.45
CLK3-213ENST00000563842 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
CLK3-213ENST00000563842 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
CLK3-213ENST00000563842 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
CLK3-213ENST00000563842 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
CLK3-213ENST00000563842 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
CLK3-213ENST00000563842 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
CLK3-213ENST00000563842 MT1BP07438 61 aa5.95□□□□□ -1.46
CLK3-213ENST00000563842 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
CLK3-213ENST00000563842 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
CLK3-213ENST00000563842 A6NN06 94 aa5.91□□□□□ -1.46
CLK3-213ENST00000563842 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
CLK3-213ENST00000563842 ACYP2P14621 99 aa5.89□□□□□ -1.47
CLK3-213ENST00000563842 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
CLK3-213ENST00000563842 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
CLK3-213ENST00000563842 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
CLK3-213ENST00000563842 R4GN34 69 aa5.82□□□□□ -1.48
CLK3-213ENST00000563842 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
CLK3-213ENST00000563842 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
CLK3-213ENST00000563842 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
CLK3-213ENST00000563842 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
CLK3-213ENST00000563842 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
CLK3-213ENST00000563842 P0C880 135 aa5.78□□□□□ -1.48
CLK3-213ENST00000563842 SPANXA2-OT1Q8N9U9 137 aa5.77□□□□□ -1.49
CLK3-213ENST00000563842 M0QZ58 72 aa5.75□□□□□ -1.49
CLK3-213ENST00000563842 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
CLK3-213ENST00000563842 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
CLK3-213ENST00000563842 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
CLK3-213ENST00000563842 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
CLK3-213ENST00000563842 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CLK3-213ENST00000563842 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
CLK3-213ENST00000563842 COX7CP15954 63 aa5.65□□□□□ -1.5
CLK3-213ENST00000563842 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
CLK3-213ENST00000563842 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
CLK3-213ENST00000563842 MT1XP80297 61 aa5.6□□□□□ -1.51
CLK3-213ENST00000563842 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
CLK3-213ENST00000563842 COA5Q86WW8 74 aa5.57□□□□□ -1.52
CLK3-213ENST00000563842 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
CLK3-213ENST00000563842 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
CLK3-213ENST00000563842 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
CLK3-213ENST00000563842 H3BS24 57 aa5.52□□□□□ -1.53
CLK3-213ENST00000563842 H7BZZ5 65 aa5.52□□□□□ -1.53
CLK3-213ENST00000563842 SEC61GP60059 68 aa5.52□□□□□ -1.53
CLK3-213ENST00000563842 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
CLK3-213ENST00000563842 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
CLK3-213ENST00000563842 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
CLK3-213ENST00000563842 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
CLK3-213ENST00000563842 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
CLK3-213ENST00000563842 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
CLK3-213ENST00000563842 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
CLK3-213ENST00000563842 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
CLK3-213ENST00000563842 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
CLK3-213ENST00000563842 A0A1B0GU33 70 aa5.37□□□□□ -1.55
CLK3-213ENST00000563842 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
CLK3-213ENST00000563842 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
CLK3-213ENST00000563842 ATP5EP56381 51 aaPredicted RBP5.34□□□□□ -1.55
CLK3-213ENST00000563842 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
CLK3-213ENST00000563842 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
CLK3-213ENST00000563842 CCDC179H3BU77 68 aa5.33□□□□□ -1.56
CLK3-213ENST00000563842 A0A1B0GU69 56 aa5.32□□□□□ -1.56
CLK3-213ENST00000563842 A0A0D9SG42 100 aa5.31□□□□□ -1.56
CLK3-213ENST00000563842 SPRR2EP22531 72 aa5.3□□□□□ -1.56
CLK3-213ENST00000563842 SPRR2BP35325 72 aa5.3□□□□□ -1.56
CLK3-213ENST00000563842 SPRR2AP35326 72 aa5.3□□□□□ -1.56
CLK3-213ENST00000563842 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
CLK3-213ENST00000563842 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
CLK3-213ENST00000563842 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
CLK3-213ENST00000563842 PRR15LQ9BU68 103 aa5.23□□□□□ -1.57
CLK3-213ENST00000563842 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
CLK3-213ENST00000563842 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
CLK3-213ENST00000563842 KRTAP12-1P59990 96 aa5.2□□□□□ -1.58
CLK3-213ENST00000563842 TMEM258P61165 79 aa5.2□□□□□ -1.58
CLK3-213ENST00000563842 SPRR2DP22532 72 aa5.15□□□□□ -1.59
CLK3-213ENST00000563842 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
CLK3-213ENST00000563842 A8MU10 97 aa5.11□□□□□ -1.59
CLK3-213ENST00000563842 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms