RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ATP11AUNQ6ZP68 121 aa6.91□□□□□ -1.3
SPG7-207ENST00000563218 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
SPG7-207ENST00000563218 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
SPG7-207ENST00000563218 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
SPG7-207ENST00000563218 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
SPG7-207ENST00000563218 IGKV2D-30A0A075B6S6 120 aa6.85□□□□□ -1.31
SPG7-207ENST00000563218 C7orf65Q6ZTY9 151 aa6.83□□□□□ -1.32
SPG7-207ENST00000563218 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
SPG7-207ENST00000563218 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
SPG7-207ENST00000563218 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
SPG7-207ENST00000563218 SPINK7P58062 85 aa6.78□□□□□ -1.32
SPG7-207ENST00000563218 MT2AP02795 61 aa6.74□□□□□ -1.33
SPG7-207ENST00000563218 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
SPG7-207ENST00000563218 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
SPG7-207ENST00000563218 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
SPG7-207ENST00000563218 HRES1P13985 223 aa6.72□□□□□ -1.33
SPG7-207ENST00000563218 MT1FP04733 61 aa6.7□□□□□ -1.34
SPG7-207ENST00000563218 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
SPG7-207ENST00000563218 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
SPG7-207ENST00000563218 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
SPG7-207ENST00000563218 DMAC1Q96GE9 116 aa6.6□□□□□ -1.35
SPG7-207ENST00000563218 A8MUN3 132 aa6.59□□□□□ -1.35
SPG7-207ENST00000563218 RBM12B-AS1Q9P1G2 102 aa6.59□□□□□ -1.35
SPG7-207ENST00000563218 ACYP2P14621 99 aa6.58□□□□□ -1.36
SPG7-207ENST00000563218 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
SPG7-207ENST00000563218 MPLKIPQ8TAP9 179 aa6.58□□□□□ -1.36
SPG7-207ENST00000563218 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
SPG7-207ENST00000563218 V9GYY9 64 aa6.53□□□□□ -1.36
SPG7-207ENST00000563218 Q1T7F1 81 aa6.52□□□□□ -1.37
SPG7-207ENST00000563218 COA5Q86WW8 74 aa6.52□□□□□ -1.37
SPG7-207ENST00000563218 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
SPG7-207ENST00000563218 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
SPG7-207ENST00000563218 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
SPG7-207ENST00000563218 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
SPG7-207ENST00000563218 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
SPG7-207ENST00000563218 NEBP20929 6669 aa6.43□□□□□ -1.38
SPG7-207ENST00000563218 S4R3F8 94 aa6.42□□□□□ -1.38
SPG7-207ENST00000563218 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
SPG7-207ENST00000563218 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
SPG7-207ENST00000563218 LCA10Q71F78 164 aa6.36□□□□□ -1.39
SPG7-207ENST00000563218 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
SPG7-207ENST00000563218 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
SPG7-207ENST00000563218 PSPHP1O15172 72 aa6.32□□□□□ -1.4
SPG7-207ENST00000563218 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
SPG7-207ENST00000563218 Q5VV11 94 aa6.29□□□□□ -1.4
SPG7-207ENST00000563218 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
SPG7-207ENST00000563218 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
SPG7-207ENST00000563218 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
SPG7-207ENST00000563218 SEC61GP60059 68 aa6.2□□□□□ -1.42
SPG7-207ENST00000563218 A0A1B0GU69 56 aa6.19□□□□□ -1.42
SPG7-207ENST00000563218 A6NED7 52 aa6.17□□□□□ -1.42
SPG7-207ENST00000563218 H0YAA0 97 aa6.12□□□□□ -1.43
SPG7-207ENST00000563218 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
SPG7-207ENST00000563218 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
SPG7-207ENST00000563218 MT1BP07438 61 aa6.07□□□□□ -1.44
SPG7-207ENST00000563218 A6NN06 94 aa6.05□□□□□ -1.44
SPG7-207ENST00000563218 UQCR11O14957 56 aa6.03□□□□□ -1.44
SPG7-207ENST00000563218 P0C880 135 aa6.03□□□□□ -1.44
SPG7-207ENST00000563218 A0A1B0GU33 70 aa6.02□□□□□ -1.45
SPG7-207ENST00000563218 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
SPG7-207ENST00000563218 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
SPG7-207ENST00000563218 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
SPG7-207ENST00000563218 A8MU10 97 aa5.99□□□□□ -1.45
SPG7-207ENST00000563218 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SPG7-207ENST00000563218 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
SPG7-207ENST00000563218 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
SPG7-207ENST00000563218 KMT2DO14686 5537 aa5.97□□□□□ -1.45
SPG7-207ENST00000563218 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
SPG7-207ENST00000563218 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
SPG7-207ENST00000563218 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
SPG7-207ENST00000563218 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
SPG7-207ENST00000563218 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
SPG7-207ENST00000563218 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
SPG7-207ENST00000563218 M0QZ58 72 aa5.91□□□□□ -1.46
SPG7-207ENST00000563218 R4GN34 69 aa5.91□□□□□ -1.46
SPG7-207ENST00000563218 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
SPG7-207ENST00000563218 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
SPG7-207ENST00000563218 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
SPG7-207ENST00000563218 A0A0D9SG42 100 aa5.8□□□□□ -1.48
SPG7-207ENST00000563218 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
SPG7-207ENST00000563218 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
SPG7-207ENST00000563218 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
SPG7-207ENST00000563218 SPRR2EP22531 72 aa5.73□□□□□ -1.49
SPG7-207ENST00000563218 SPRR2BP35325 72 aa5.73□□□□□ -1.49
SPG7-207ENST00000563218 SPRR2AP35326 72 aa5.73□□□□□ -1.49
SPG7-207ENST00000563218 K7ERS5 55 aa5.7□□□□□ -1.5
SPG7-207ENST00000563218 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
SPG7-207ENST00000563218 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
SPG7-207ENST00000563218 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
SPG7-207ENST00000563218 H3BS24 57 aa5.67□□□□□ -1.5
SPG7-207ENST00000563218 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
SPG7-207ENST00000563218 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SPG7-207ENST00000563218 MT1XP80297 61 aa5.61□□□□□ -1.51
SPG7-207ENST00000563218 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
SPG7-207ENST00000563218 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
SPG7-207ENST00000563218 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
SPG7-207ENST00000563218 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
SPG7-207ENST00000563218 SPRR2DP22532 72 aa5.54□□□□□ -1.52
SPG7-207ENST00000563218 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
SPG7-207ENST00000563218 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms