RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 J3KT08 172 aa1.4□□□□□ -2.19
HERC1-215ENST00000561436 SPINK7P58062 85 aa1.4□□□□□ -2.19
HERC1-215ENST00000561436 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.19
HERC1-215ENST00000561436 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
HERC1-215ENST00000561436 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
HERC1-215ENST00000561436 MUSTN1Q8IVN3 82 aa1.39□□□□□ -2.19
HERC1-215ENST00000561436 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
HERC1-215ENST00000561436 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
HERC1-215ENST00000561436 H3BMG7 143 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BOP23527 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BBP33778 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BDP58876 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BCP62807 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST2H2BEQ16778 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.38□□□□□ -2.19
HERC1-215ENST00000561436 Q5VV11 94 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 C7orf65Q6ZTY9 151 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 ANKRD29Q8N6D5 301 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BHQ93079 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 SIGMAR1Q99720 223 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BNQ99877 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 HIST1H2BMQ99879 126 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 PMCHL2Q9BQD1 86 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 LINC00472Q9H8W2 130 aa1.38□□□□□ -2.19
HERC1-215ENST00000561436 H3BUT2 72 aa1.37□□□□□ -2.19
HERC1-215ENST00000561436 APOC3P02656 99 aa1.37□□□□□ -2.19
HERC1-215ENST00000561436 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
HERC1-215ENST00000561436 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
HERC1-215ENST00000561436 TMEM256-PLSCR3K7ERE1 68 aa1.36□□□□□ -2.19
HERC1-215ENST00000561436 NDUFB1O75438 58 aa1.36□□□□□ -2.19
HERC1-215ENST00000561436 CRIPTQ9P021 101 aa1.36□□□□□ -2.19
HERC1-215ENST00000561436 IGKV3D-7A0A0C4DH55 119 aa1.35□□□□□ -2.19
HERC1-215ENST00000561436 TRACP01848 142 aa1.35□□□□□ -2.19
HERC1-215ENST00000561436 S100A6P06703 90 aa1.35□□□□□ -2.19
HERC1-215ENST00000561436 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
HERC1-215ENST00000561436 CYSTM1Q9H1C7 97 aa1.35□□□□□ -2.19
HERC1-215ENST00000561436 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
HERC1-215ENST00000561436 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.19
HERC1-215ENST00000561436 MT1BP07438 61 aa1.34□□□□□ -2.19
HERC1-215ENST00000561436 FABP2P12104 132 aa1.34□□□□□ -2.19
HERC1-215ENST00000561436 Q1T7F1 81 aa1.34□□□□□ -2.19
HERC1-215ENST00000561436 LYRM7Q5U5X0 104 aa1.34□□□□□ -2.19
HERC1-215ENST00000561436 DLEU1O43261 78 aa1.33□□□□□ -2.2
HERC1-215ENST00000561436 DNAL4O96015 105 aa1.33□□□□□ -2.2
HERC1-215ENST00000561436 CCKP06307 115 aa1.33□□□□□ -2.2
HERC1-215ENST00000561436 CSAG1Q6PB30 78 aa1.33□□□□□ -2.2
HERC1-215ENST00000561436 ORMDL1Q9P0S3 153 aa1.33□□□□□ -2.2
HERC1-215ENST00000561436 K7EQZ3 153 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 HIST1H2BKO60814 126 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 HIST1H2BJP06899 126 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 PDE6GP18545 87 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 SPRR2EP22531 72 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 SPRR2BP35325 72 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 SPRR2AP35326 72 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 KRTDAPP60985 99 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 KLKP1Q107X0 134 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 PRR15Q8IV56 129 aa1.32□□□□□ -2.2
HERC1-215ENST00000561436 FAM236AA0A1B0GUQ0 79 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 FAM236BA0A1B0GV22 79 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 COX6CP09669 75 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 RBM3P98179 157 aaKnown RBP1.31□□□□□ -2.2
HERC1-215ENST00000561436 Q6ZQT0 140 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 HIST3H2BBQ8N257 126 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 HIGD1BQ9P298 99 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 PRO1854Q9UHT4 67 aa1.31□□□□□ -2.2
HERC1-215ENST00000561436 C9JAW5 83 aa1.3□□□□□ -2.2
HERC1-215ENST00000561436 SPRR2FQ96RM1 72 aa1.3□□□□□ -2.2
HERC1-215ENST00000561436 MRPL34Q9BQ48 92 aaKnown RBP1.3□□□□□ -2.2
HERC1-215ENST00000561436 IMUPQ9GZP8 106 aa1.3□□□□□ -2.2
HERC1-215ENST00000561436 JMJD7-PLA2G4BH0Y9G9 81 aa1.29□□□□□ -2.2
HERC1-215ENST00000561436 COX8AP10176 69 aa1.29□□□□□ -2.2
HERC1-215ENST00000561436 SPRR2DP22532 72 aa1.29□□□□□ -2.2
HERC1-215ENST00000561436 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
HERC1-215ENST00000561436 HIST1H2BLQ99880 126 aa1.29□□□□□ -2.2
HERC1-215ENST00000561436 SNURFQ9Y675 71 aa1.29□□□□□ -2.2
HERC1-215ENST00000561436 LOC110117498A0A087WWA1 95 aa1.28□□□□□ -2.2
HERC1-215ENST00000561436 hDV103S1A0JD37 113 aa1.28□□□□□ -2.2
HERC1-215ENST00000561436 H0YAA0 97 aa1.28□□□□□ -2.2
HERC1-215ENST00000561436 ATOH7Q8N100 152 aa1.28□□□□□ -2.2
HERC1-215ENST00000561436 S4R3F8 94 aa1.28□□□□□ -2.2
HERC1-215ENST00000561436 NREPQ16612 68 aa1.27□□□□□ -2.21
HERC1-215ENST00000561436 MMP24-AS1A0A0U1RRL7 71 aa1.26□□□□□ -2.21
HERC1-215ENST00000561436 BAALC-AS2P0C853 105 aa1.26□□□□□ -2.21
HERC1-215ENST00000561436 VPS25Q9BRG1 176 aa1.26□□□□□ -2.21
HERC1-215ENST00000561436 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
HERC1-215ENST00000561436 LCA10Q71F78 164 aa1.25□□□□□ -2.21
HERC1-215ENST00000561436 PLAC4Q8WY50 150 aa1.25□□□□□ -2.21
HERC1-215ENST00000561436 VAMP8Q9BV40 100 aa1.25□□□□□ -2.21
HERC1-215ENST00000561436 TP53AIP1Q9HCN2 124 aa1.24□□□□□ -2.21
HERC1-215ENST00000561436 MT1XP80297 61 aa1.23□□□□□ -2.21
HERC1-215ENST00000561436 HSD52Q0P140 79 aa1.23□□□□□ -2.21
HERC1-215ENST00000561436 ATXN8Q156A1 80 aa1.23□□□□□ -2.21
HERC1-215ENST00000561436 CASC2Q6XLA1 102 aa1.23□□□□□ -2.21
HERC1-215ENST00000561436 C20orf197Q8N268 126 aa1.23□□□□□ -2.21
HERC1-215ENST00000561436 NDUFC1O43677 76 aa1.22□□□□□ -2.21
HERC1-215ENST00000561436 S100A1P23297 94 aa1.22□□□□□ -2.21
HERC1-215ENST00000561436 LINC01554Q52M75 96 aa1.22□□□□□ -2.21
HERC1-215ENST00000561436 C14orf144Q96I85 54 aa1.22□□□□□ -2.21
HERC1-215ENST00000561436 A0A1B0GV72 72 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 415.3 ms