RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 UQCR11O14957 56 aa6.61□□□□□ -1.35
HERC1-214ENST00000561400 NDUFAF8A1L188 74 aa6.61□□□□□ -1.35
HERC1-214ENST00000561400 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
HERC1-214ENST00000561400 LUZP6Q538Z0 58 aa6.61□□□□□ -1.35
HERC1-214ENST00000561400 PCOTHQ58A44 107 aa6.57□□□□□ -1.36
HERC1-214ENST00000561400 A0A1B0GU69 56 aa6.56□□□□□ -1.36
HERC1-214ENST00000561400 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
HERC1-214ENST00000561400 K7ERS5 55 aa6.51□□□□□ -1.37
HERC1-214ENST00000561400 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
HERC1-214ENST00000561400 Q96NJ1 140 aa6.49□□□□□ -1.37
HERC1-214ENST00000561400 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
HERC1-214ENST00000561400 LPAP08519 4548 aa6.46□□□□□ -1.37
HERC1-214ENST00000561400 Q5W150 140 aa6.45□□□□□ -1.38
HERC1-214ENST00000561400 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
HERC1-214ENST00000561400 TP53AIP1Q9HCN2 124 aa6.43□□□□□ -1.38
HERC1-214ENST00000561400 ACYP2P14621 99 aa6.41□□□□□ -1.38
HERC1-214ENST00000561400 LRP2P98164 4655 aa6.4□□□□□ -1.38
HERC1-214ENST00000561400 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
HERC1-214ENST00000561400 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
HERC1-214ENST00000561400 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
HERC1-214ENST00000561400 C9orf92A6NGG3 77 aa6.37□□□□□ -1.39
HERC1-214ENST00000561400 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
HERC1-214ENST00000561400 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
HERC1-214ENST00000561400 XP32Q5T750 250 aa6.31□□□□□ -1.4
HERC1-214ENST00000561400 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
HERC1-214ENST00000561400 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
HERC1-214ENST00000561400 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
HERC1-214ENST00000561400 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
HERC1-214ENST00000561400 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
HERC1-214ENST00000561400 H0YAA0 97 aa6.15□□□□□ -1.43
HERC1-214ENST00000561400 MUC2Q02817 5179 aa6.14□□□□□ -1.43
HERC1-214ENST00000561400 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
HERC1-214ENST00000561400 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
HERC1-214ENST00000561400 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.44
HERC1-214ENST00000561400 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
HERC1-214ENST00000561400 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
HERC1-214ENST00000561400 A0A1B0GU33 70 aa5.93□□□□□ -1.46
HERC1-214ENST00000561400 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
HERC1-214ENST00000561400 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
HERC1-214ENST00000561400 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
HERC1-214ENST00000561400 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
HERC1-214ENST00000561400 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
HERC1-214ENST00000561400 COX6B2Q6YFQ2 88 aa5.83□□□□□ -1.48
HERC1-214ENST00000561400 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
HERC1-214ENST00000561400 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
HERC1-214ENST00000561400 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
HERC1-214ENST00000561400 MT1HP80294 61 aa5.76□□□□□ -1.49
HERC1-214ENST00000561400 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
HERC1-214ENST00000561400 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
HERC1-214ENST00000561400 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
HERC1-214ENST00000561400 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
HERC1-214ENST00000561400 M0R2T5 61 aa5.67□□□□□ -1.5
HERC1-214ENST00000561400 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
HERC1-214ENST00000561400 KRTAP10-6P60371 365 aaPredicted RBP5.59□□□□□ -1.51
HERC1-214ENST00000561400 S4R3F8 94 aa5.59□□□□□ -1.51
HERC1-214ENST00000561400 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
HERC1-214ENST00000561400 R4GN34 69 aa5.54□□□□□ -1.52
HERC1-214ENST00000561400 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
HERC1-214ENST00000561400 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
HERC1-214ENST00000561400 MT2AP02795 61 aa5.47□□□□□ -1.53
HERC1-214ENST00000561400 A0A0D9SG42 100 aa5.44□□□□□ -1.54
HERC1-214ENST00000561400 MT1FP04733 61 aa5.44□□□□□ -1.54
HERC1-214ENST00000561400 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
HERC1-214ENST00000561400 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
HERC1-214ENST00000561400 INE1O15225 51 aa5.35□□□□□ -1.55
HERC1-214ENST00000561400 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
HERC1-214ENST00000561400 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
HERC1-214ENST00000561400 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
HERC1-214ENST00000561400 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
HERC1-214ENST00000561400 LCE2BO14633 110 aa5.24□□□□□ -1.57
HERC1-214ENST00000561400 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
HERC1-214ENST00000561400 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
HERC1-214ENST00000561400 SPRR2GQ9BYE4 73 aa5.2□□□□□ -1.58
HERC1-214ENST00000561400 USH2AO75445 5202 aa5.18□□□□□ -1.58
HERC1-214ENST00000561400 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
HERC1-214ENST00000561400 M0QZ58 72 aa5.12□□□□□ -1.59
HERC1-214ENST00000561400 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
HERC1-214ENST00000561400 MT1BP07438 61 aa5.08□□□□□ -1.6
HERC1-214ENST00000561400 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
HERC1-214ENST00000561400 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
HERC1-214ENST00000561400 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
HERC1-214ENST00000561400 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
HERC1-214ENST00000561400 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
HERC1-214ENST00000561400 FCGBPQ9Y6R7 5405 aaPredicted RBP4.9□□□□□ -1.62
HERC1-214ENST00000561400 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
HERC1-214ENST00000561400 MT1XP80297 61 aa4.85□□□□□ -1.63
HERC1-214ENST00000561400 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
HERC1-214ENST00000561400 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
HERC1-214ENST00000561400 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
HERC1-214ENST00000561400 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
HERC1-214ENST00000561400 KMT2DO14686 5537 aa4.61□□□□□ -1.67
HERC1-214ENST00000561400 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
HERC1-214ENST00000561400 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
HERC1-214ENST00000561400 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
HERC1-214ENST00000561400 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
HERC1-214ENST00000561400 TNP1P09430 55 aa4.49□□□□□ -1.69
HERC1-214ENST00000561400 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
HERC1-214ENST00000561400 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
HERC1-214ENST00000561400 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
HERC1-214ENST00000561400 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms