RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 MDN1Q9NU22 5596 aa10.36□□□□□ -0.75
PBX1-217ENST00000559578 TRAV22A0A0B4J277 110 aa10.29□□□□□ -0.76
PBX1-217ENST00000559578 LOC101927531A0A1B0GV80 90 aa10.27□□□□□ -0.77
PBX1-217ENST00000559578 ETDBQ3ZM63 59 aa10.27□□□□□ -0.77
PBX1-217ENST00000559578 KRTAP2-3P0C7H8 128 aa10.26□□□□□ -0.77
PBX1-217ENST00000559578 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
PBX1-217ENST00000559578 KRTAP2-4Q9BYR9 128 aa10.26□□□□□ -0.77
PBX1-217ENST00000559578 F8W1H4 67 aa10.23□□□□□ -0.77
PBX1-217ENST00000559578 H0YAA0 97 aa10.18□□□□□ -0.78
PBX1-217ENST00000559578 NDUFC1O43677 76 aa10.18□□□□□ -0.78
PBX1-217ENST00000559578 SPRR2FQ96RM1 72 aa10.18□□□□□ -0.78
PBX1-217ENST00000559578 PRO2289Q9P1D8 64 aa10.16□□□□□ -0.78
PBX1-217ENST00000559578 SPRR2EP22531 72 aa10.13□□□□□ -0.79
PBX1-217ENST00000559578 SPRR2BP35325 72 aa10.13□□□□□ -0.79
PBX1-217ENST00000559578 SPRR2AP35326 72 aa10.13□□□□□ -0.79
PBX1-217ENST00000559578 H0Y9P7 68 aa10.11□□□□□ -0.79
PBX1-217ENST00000559578 A8MUN3 132 aa10.1□□□□□ -0.79
PBX1-217ENST00000559578 UQCRQO14949 82 aa10.09□□□□□ -0.79
PBX1-217ENST00000559578 ATOX1O00244 68 aa10.07□□□□□ -0.8
PBX1-217ENST00000559578 HIST1H4AP62805 103 aaKnown RBP10.07□□□□□ -0.8
PBX1-217ENST00000559578 ADM2Q7Z4H4 148 aa10.07□□□□□ -0.8
PBX1-217ENST00000559578 ACYP1P07311 99 aa10.05□□□□□ -0.8
PBX1-217ENST00000559578 MT1XP80297 61 aa10.04□□□□□ -0.8
PBX1-217ENST00000559578 KRTAP8-1Q8IUC2 63 aa10.02□□□□□ -0.81
PBX1-217ENST00000559578 PLAC4Q8WY50 150 aa10.02□□□□□ -0.81
PBX1-217ENST00000559578 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
PBX1-217ENST00000559578 PCP4L1A6NKN8 68 aa9.95□□□□□ -0.82
PBX1-217ENST00000559578 FAM240AA0A1B0GVK7 77 aa9.93□□□□□ -0.82
PBX1-217ENST00000559578 LCE1AQ5T7P2 110 aa9.92□□□□□ -0.82
PBX1-217ENST00000559578 LINC00208Q96KT6 92 aa9.92□□□□□ -0.82
PBX1-217ENST00000559578 KRTAP2-2Q9BYT5 123 aa9.91□□□□□ -0.82
PBX1-217ENST00000559578 KRTAP2-1Q9BYU5 128 aa9.91□□□□□ -0.82
PBX1-217ENST00000559578 KRTAP12-2P59991 146 aa9.9□□□□□ -0.82
PBX1-217ENST00000559578 R4GN34 69 aa9.87□□□□□ -0.83
PBX1-217ENST00000559578 SPRR2DP22532 72 aa9.81□□□□□ -0.84
PBX1-217ENST00000559578 MP68P56378 58 aa9.8□□□□□ -0.84
PBX1-217ENST00000559578 P0C880 135 aa9.79□□□□□ -0.84
PBX1-217ENST00000559578 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
PBX1-217ENST00000559578 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
PBX1-217ENST00000559578 M0QZ58 72 aa9.76□□□□□ -0.85
PBX1-217ENST00000559578 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
PBX1-217ENST00000559578 KRTAP4-8A0A0G2JLE6 195 aa9.74□□□□□ -0.85
PBX1-217ENST00000559578 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
PBX1-217ENST00000559578 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
PBX1-217ENST00000559578 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
PBX1-217ENST00000559578 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
PBX1-217ENST00000559578 H3BPC8 53 aa9.58□□□□□ -0.88
PBX1-217ENST00000559578 KRTAP10-7P60409 375 aaPredicted RBP9.57□□□□□ -0.88
PBX1-217ENST00000559578 LCE3BQ5TA77 95 aa9.57□□□□□ -0.88
PBX1-217ENST00000559578 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
PBX1-217ENST00000559578 SCGB1A1P11684 91 aa9.46□□□□□ -0.9
PBX1-217ENST00000559578 TRAV7A0A075B6U4 112 aa9.4□□□□□ -0.9
PBX1-217ENST00000559578 MT-ATP8P03928 68 aa9.4□□□□□ -0.9
PBX1-217ENST00000559578 A0A1B0GV90 55 aa9.35□□□□□ -0.91
PBX1-217ENST00000559578 ACYP2P14621 99 aa9.35□□□□□ -0.91
PBX1-217ENST00000559578 J3QR89 54 aa9.3□□□□□ -0.92
PBX1-217ENST00000559578 SPTSSBQ8NFR3 76 aa9.29□□□□□ -0.92
PBX1-217ENST00000559578 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
PBX1-217ENST00000559578 GPR98Q8WXG9 6306 aa9.14□□□□□ -0.95
PBX1-217ENST00000559578 DSTQ03001 7570 aaKnown RBP9.14□□□□□ -0.95
PBX1-217ENST00000559578 SMIM20Q8N5G0 67 aa9.07□□□□□ -0.96
PBX1-217ENST00000559578 LCE5AQ5TCM9 118 aa9.04□□□□□ -0.96
PBX1-217ENST00000559578 KRTAP13-4Q3LI77 160 aa9.02□□□□□ -0.97
PBX1-217ENST00000559578 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
PBX1-217ENST00000559578 KRTAP4-9Q9BYQ8 210 aa9□□□□□ -0.97
PBX1-217ENST00000559578 SNURFQ9Y675 71 aa9□□□□□ -0.97
PBX1-217ENST00000559578 KRTAP19-7Q3SYF9 63 aa8.98□□□□□ -0.97
PBX1-217ENST00000559578 KRTAP19-3Q7Z4W3 81 aa8.95□□□□□ -0.98
PBX1-217ENST00000559578 MT1EP04732 61 aa8.94□□□□□ -0.98
PBX1-217ENST00000559578 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
PBX1-217ENST00000559578 CYSTM1Q9H1C7 97 aa8.79□□□□□ -1
PBX1-217ENST00000559578 K7ERU9 68 aa8.78□□□□□ -1
PBX1-217ENST00000559578 A0A0D9SG42 100 aa8.75□□□□□ -1.01
PBX1-217ENST00000559578 LCE1DQ5T752 114 aa8.74□□□□□ -1.01
PBX1-217ENST00000559578 MT1GP13640 62 aa8.71□□□□□ -1.02
PBX1-217ENST00000559578 COA5Q86WW8 74 aa8.68□□□□□ -1.02
PBX1-217ENST00000559578 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
PBX1-217ENST00000559578 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
PBX1-217ENST00000559578 SERP1Q9Y6X1 66 aa8.67□□□□□ -1.02
PBX1-217ENST00000559578 SEC61GP60059 68 aa8.66□□□□□ -1.02
PBX1-217ENST00000559578 KRTAP19-5Q3LI72 72 aa8.66□□□□□ -1.02
PBX1-217ENST00000559578 SPATA8Q6RVD6 105 aa8.65□□□□□ -1.02
PBX1-217ENST00000559578 LCE4AQ5TA78 99 aa8.64□□□□□ -1.03
PBX1-217ENST00000559578 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
PBX1-217ENST00000559578 MT4P47944 62 aa8.6□□□□□ -1.03
PBX1-217ENST00000559578 A0A1B0GU33 70 aa8.54□□□□□ -1.04
PBX1-217ENST00000559578 MT1MQ8N339 61 aa8.53□□□□□ -1.04
PBX1-217ENST00000559578 HMCN1Q96RW7 5635 aa8.53□□□□□ -1.04
PBX1-217ENST00000559578 KRTAP12-1P59990 96 aa8.52□□□□□ -1.05
PBX1-217ENST00000559578 MT1LQ93083 61 aa8.47□□□□□ -1.05
PBX1-217ENST00000559578 KRTAP5-4Q6L8H1 288 aa8.37□□□□□ -1.07
PBX1-217ENST00000559578 AHNAK2Q8IVF2 5795 aa8.36□□□□□ -1.07
PBX1-217ENST00000559578 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
PBX1-217ENST00000559578 KRTAP5-10Q6L8G5 202 aa8.32□□□□□ -1.08
PBX1-217ENST00000559578 COX7CP15954 63 aa8.31□□□□□ -1.08
PBX1-217ENST00000559578 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
PBX1-217ENST00000559578 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
PBX1-217ENST00000559578 LCE3AQ5TA76 89 aa8.28□□□□□ -1.08
PBX1-217ENST00000559578 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
PBX1-217ENST00000559578 A0A1B0GU69 56 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms