RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
PBX1-213ENST00000558796 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
PBX1-213ENST00000558796 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
PBX1-213ENST00000558796 OCR1Q9BZK8 76 aa5.05□□□□□ -1.6
PBX1-213ENST00000558796 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
PBX1-213ENST00000558796 KLKP1Q107X0 134 aa5.02□□□□□ -1.61
PBX1-213ENST00000558796 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
PBX1-213ENST00000558796 MP68P56378 58 aa5.01□□□□□ -1.61
PBX1-213ENST00000558796 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
PBX1-213ENST00000558796 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
PBX1-213ENST00000558796 A8MUN3 132 aa4.96□□□□□ -1.62
PBX1-213ENST00000558796 NDUFC1O43677 76 aa4.96□□□□□ -1.62
PBX1-213ENST00000558796 SEC61GP60059 68 aa4.94□□□□□ -1.62
PBX1-213ENST00000558796 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
PBX1-213ENST00000558796 H3BPC8 53 aa4.93□□□□□ -1.62
PBX1-213ENST00000558796 MT-ATP8P03928 68 aa4.93□□□□□ -1.62
PBX1-213ENST00000558796 MT1BP07438 61 aa4.92□□□□□ -1.62
PBX1-213ENST00000558796 Q5VV11 94 aa4.92□□□□□ -1.62
PBX1-213ENST00000558796 IMUPQ9GZP8 106 aa4.92□□□□□ -1.62
PBX1-213ENST00000558796 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.62
PBX1-213ENST00000558796 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
PBX1-213ENST00000558796 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.63
PBX1-213ENST00000558796 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
PBX1-213ENST00000558796 V9GYY9 64 aa4.89□□□□□ -1.63
PBX1-213ENST00000558796 H0YAA0 97 aa4.87□□□□□ -1.63
PBX1-213ENST00000558796 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
PBX1-213ENST00000558796 DMAC1Q96GE9 116 aa4.87□□□□□ -1.63
PBX1-213ENST00000558796 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
PBX1-213ENST00000558796 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
PBX1-213ENST00000558796 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
PBX1-213ENST00000558796 A6NN06 94 aa4.83□□□□□ -1.64
PBX1-213ENST00000558796 TMEM258P61165 79 aa4.81□□□□□ -1.64
PBX1-213ENST00000558796 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
PBX1-213ENST00000558796 P0C880 135 aa4.77□□□□□ -1.65
PBX1-213ENST00000558796 SNURFQ9Y675 71 aa4.76□□□□□ -1.65
PBX1-213ENST00000558796 ACYP2P14621 99 aa4.74□□□□□ -1.65
PBX1-213ENST00000558796 COX7CP15954 63 aa4.74□□□□□ -1.65
PBX1-213ENST00000558796 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
PBX1-213ENST00000558796 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
PBX1-213ENST00000558796 R4GN34 69 aa4.73□□□□□ -1.65
PBX1-213ENST00000558796 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
PBX1-213ENST00000558796 M0QZ58 72 aa4.71□□□□□ -1.66
PBX1-213ENST00000558796 CHKB-CPT1BH3BT56 60 aa4.69□□□□□ -1.66
PBX1-213ENST00000558796 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
PBX1-213ENST00000558796 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
PBX1-213ENST00000558796 SPTSSBQ8NFR3 76 aa4.67□□□□□ -1.66
PBX1-213ENST00000558796 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
PBX1-213ENST00000558796 SMIM26A0A096LP01 95 aa4.65□□□□□ -1.67
PBX1-213ENST00000558796 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
PBX1-213ENST00000558796 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.67
PBX1-213ENST00000558796 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.67
PBX1-213ENST00000558796 MT1XP80297 61 aa4.64□□□□□ -1.67
PBX1-213ENST00000558796 KMT2DO14686 5537 aa4.64□□□□□ -1.67
PBX1-213ENST00000558796 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
PBX1-213ENST00000558796 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
PBX1-213ENST00000558796 ATP5EP56381 51 aaPredicted RBP4.6□□□□□ -1.67
PBX1-213ENST00000558796 NEBP20929 6669 aa4.57□□□□□ -1.68
PBX1-213ENST00000558796 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
PBX1-213ENST00000558796 COA5Q86WW8 74 aa4.55□□□□□ -1.68
PBX1-213ENST00000558796 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
PBX1-213ENST00000558796 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
PBX1-213ENST00000558796 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
PBX1-213ENST00000558796 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
PBX1-213ENST00000558796 H7BZZ5 65 aa4.49□□□□□ -1.69
PBX1-213ENST00000558796 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
PBX1-213ENST00000558796 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.7
PBX1-213ENST00000558796 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
PBX1-213ENST00000558796 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
PBX1-213ENST00000558796 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
PBX1-213ENST00000558796 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
PBX1-213ENST00000558796 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
PBX1-213ENST00000558796 SPRR2EP22531 72 aa4.38□□□□□ -1.71
PBX1-213ENST00000558796 SPRR2BP35325 72 aa4.38□□□□□ -1.71
PBX1-213ENST00000558796 SPRR2AP35326 72 aa4.38□□□□□ -1.71
PBX1-213ENST00000558796 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
PBX1-213ENST00000558796 A0A0D9SG42 100 aa4.37□□□□□ -1.71
PBX1-213ENST00000558796 H3BS24 57 aa4.37□□□□□ -1.71
PBX1-213ENST00000558796 Q1T7F1 81 aa4.37□□□□□ -1.71
PBX1-213ENST00000558796 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
PBX1-213ENST00000558796 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
PBX1-213ENST00000558796 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
PBX1-213ENST00000558796 A0A1B0GU33 70 aa4.34□□□□□ -1.71
PBX1-213ENST00000558796 A0A1B0GU69 56 aa4.31□□□□□ -1.72
PBX1-213ENST00000558796 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
PBX1-213ENST00000558796 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
PBX1-213ENST00000558796 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
PBX1-213ENST00000558796 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
PBX1-213ENST00000558796 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
PBX1-213ENST00000558796 A8MU10 97 aa4.23□□□□□ -1.73
PBX1-213ENST00000558796 SPRR2DP22532 72 aa4.23□□□□□ -1.73
PBX1-213ENST00000558796 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
PBX1-213ENST00000558796 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
PBX1-213ENST00000558796 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
PBX1-213ENST00000558796 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
PBX1-213ENST00000558796 PSPHP1O15172 72 aa4.12□□□□□ -1.75
PBX1-213ENST00000558796 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
PBX1-213ENST00000558796 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
PBX1-213ENST00000558796 MT1EP04732 61 aa4.1□□□□□ -1.75
PBX1-213ENST00000558796 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
PBX1-213ENST00000558796 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms