RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	MRPL34	Q9BQ48	92 aa	Known RBP	3.55	□□□□□ -1.84
MARK3-215	ENST00000558787	USH2A	O75445	5202 aa		3.54	□□□□□ -1.84
MARK3-215	ENST00000558787	WFDC13	Q8IUB5	93 aa		3.54	□□□□□ -1.84
MARK3-215	ENST00000558787		A0A087WVE0	104 aa		3.53	□□□□□ -1.84
MARK3-215	ENST00000558787	SSPO	A2VEC9	5147 aa		3.53	□□□□□ -1.84
MARK3-215	ENST00000558787	NDUFS5	O43920	106 aa		3.51	□□□□□ -1.85
MARK3-215	ENST00000558787	SCGB1A1	P11684	91 aa		3.51	□□□□□ -1.85
MARK3-215	ENST00000558787	TP53AIP1	Q9HCN2	124 aa		3.51	□□□□□ -1.85
MARK3-215	ENST00000558787	KRTAP9-6	A8MVA2	160 aa		3.5	□□□□□ -1.85
MARK3-215	ENST00000558787	FAM236D	A0A1B0GTK5	79 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	FAM236A	A0A1B0GUQ0	79 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	FAM236B	A0A1B0GV22	79 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	MT2A	P02795	61 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	FAM236C	P0DP71	79 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	HRES1	P13985	223 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	KRTAP10-12	P60413	245 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	SMIM20	Q8N5G0	67 aa		3.49	□□□□□ -1.85
MARK3-215	ENST00000558787	ATOX1	O00244	68 aa		3.47	□□□□□ -1.85
MARK3-215	ENST00000558787	UQCRQ	O14949	82 aa		3.47	□□□□□ -1.85
MARK3-215	ENST00000558787	MT1F	P04733	61 aa		3.47	□□□□□ -1.85
MARK3-215	ENST00000558787	ZCCHC13	Q8WW36	166 aa	Known RBP	3.47	□□□□□ -1.85
MARK3-215	ENST00000558787	OCR1	Q9BZK8	76 aa		3.46	□□□□□ -1.86
MARK3-215	ENST00000558787	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.46	□□□□□ -1.86
MARK3-215	ENST00000558787	KRTAP10-10	P60014	251 aa		3.45	□□□□□ -1.86
MARK3-215	ENST00000558787	RBM12B-AS1	Q9P1G2	102 aa		3.45	□□□□□ -1.86
MARK3-215	ENST00000558787	TRAV7	A0A075B6U4	112 aa		3.44	□□□□□ -1.86
MARK3-215	ENST00000558787	TRAV22	A0A0B4J277	110 aa		3.44	□□□□□ -1.86
MARK3-215	ENST00000558787	MP68	P56378	58 aa		3.44	□□□□□ -1.86
MARK3-215	ENST00000558787	C5orf47	Q569G3	176 aa		3.43	□□□□□ -1.86
MARK3-215	ENST00000558787	LCE1F	Q5T754	118 aa		3.43	□□□□□ -1.86
MARK3-215	ENST00000558787	KRTAP5-4	Q6L8H1	288 aa		3.43	□□□□□ -1.86
MARK3-215	ENST00000558787		H0Y9P7	68 aa		3.42	□□□□□ -1.86
MARK3-215	ENST00000558787		H3BPC8	53 aa		3.42	□□□□□ -1.86
MARK3-215	ENST00000558787	KRTAP5-9	P26371	169 aa		3.42	□□□□□ -1.86
MARK3-215	ENST00000558787		Q5W150	140 aa		3.42	□□□□□ -1.86
MARK3-215	ENST00000558787	LOC101927531	A0A1B0GV80	90 aa		3.41	□□□□□ -1.86
MARK3-215	ENST00000558787	SPINK7	P58062	85 aa		3.41	□□□□□ -1.86
MARK3-215	ENST00000558787	SERP2	Q8N6R1	65 aa		3.41	□□□□□ -1.86
MARK3-215	ENST00000558787	KRTAP4-4	Q9BYR3	166 aa		3.41	□□□□□ -1.86
MARK3-215	ENST00000558787	C7orf65	Q6ZTY9	151 aa		3.4	□□□□□ -1.87
MARK3-215	ENST00000558787	SYNE2	Q8WXH0	6885 aa	Known RBP	3.4	□□□□□ -1.87
MARK3-215	ENST00000558787	C1orf64	Q8NEQ6	169 aa		3.39	□□□□□ -1.87
MARK3-215	ENST00000558787	LINC00208	Q96KT6	92 aa		3.38	□□□□□ -1.87
MARK3-215	ENST00000558787	ANAPC13	Q9BS18	74 aa		3.38	□□□□□ -1.87
MARK3-215	ENST00000558787	COX7C	P15954	63 aa		3.37	□□□□□ -1.87
MARK3-215	ENST00000558787	CYP4F30P	Q9H0H9	118 aa		3.37	□□□□□ -1.87
MARK3-215	ENST00000558787	MACF1	Q9UPN3	7388 aa	Known RBP	3.36	□□□□□ -1.87
MARK3-215	ENST00000558787	PRAC1	Q96KF2	57 aa		3.36	□□□□□ -1.87
MARK3-215	ENST00000558787	KLKP1	Q107X0	134 aa		3.34	□□□□□ -1.87
MARK3-215	ENST00000558787	C20orf197	Q8N268	126 aa		3.34	□□□□□ -1.87
MARK3-215	ENST00000558787	NDUFC1	O43677	76 aa		3.32	□□□□□ -1.88
MARK3-215	ENST00000558787	SNURF	Q9Y675	71 aa		3.32	□□□□□ -1.88
MARK3-215	ENST00000558787	KRTAP19-6	Q3LI70	58 aa		3.31	□□□□□ -1.88
MARK3-215	ENST00000558787	CCDC179	H3BU77	68 aa		3.29	□□□□□ -1.88
MARK3-215	ENST00000558787	C4orf26	Q17RF5	130 aa		3.29	□□□□□ -1.88
MARK3-215	ENST00000558787	H1FX-AS1	Q4G0G2	97 aa		3.29	□□□□□ -1.88
MARK3-215	ENST00000558787		A8MUN3	132 aa		3.28	□□□□□ -1.88
MARK3-215	ENST00000558787	LCE3C	Q5T5A8	94 aa		3.27	□□□□□ -1.89
MARK3-215	ENST00000558787	SPANXA2-OT1	Q8N9U9	137 aa		3.27	□□□□□ -1.89
MARK3-215	ENST00000558787		H7BZZ5	65 aa		3.26	□□□□□ -1.89
MARK3-215	ENST00000558787	DMAC1	Q96GE9	116 aa		3.25	□□□□□ -1.89
MARK3-215	ENST00000558787	CYSTM1	Q9H1C7	97 aa		3.24	□□□□□ -1.89
MARK3-215	ENST00000558787	ATP5E	P56381	51 aa	Predicted RBP	3.23	□□□□□ -1.89
MARK3-215	ENST00000558787	ACYP2	P14621	99 aa		3.22	□□□□□ -1.89
MARK3-215	ENST00000558787	TMEM258	P61165	79 aa		3.22	□□□□□ -1.89
MARK3-215	ENST00000558787		S4R3F8	94 aa		3.21	□□□□□ -1.9
MARK3-215	ENST00000558787	KRTAP6-3	Q3LI67	103 aa		3.2	□□□□□ -1.9
MARK3-215	ENST00000558787	NEB	P20929	6669 aa		3.18	□□□□□ -1.9
MARK3-215	ENST00000558787	CHKB-CPT1B	H3BT56	60 aa		3.17	□□□□□ -1.9
MARK3-215	ENST00000558787	LCA10	Q71F78	164 aa		3.17	□□□□□ -1.9
MARK3-215	ENST00000558787	SPTSSB	Q8NFR3	76 aa		3.17	□□□□□ -1.9
MARK3-215	ENST00000558787	MT1B	P07438	61 aa		3.16	□□□□□ -1.9
MARK3-215	ENST00000558787	CSAG1	Q6PB30	78 aa		3.16	□□□□□ -1.9
MARK3-215	ENST00000558787	COA5	Q86WW8	74 aa		3.15	□□□□□ -1.91
MARK3-215	ENST00000558787	OBSCN	Q5VST9	7968 aa		3.14	□□□□□ -1.91
MARK3-215	ENST00000558787		A6NN06	94 aa		3.13	□□□□□ -1.91
MARK3-215	ENST00000558787		Q5VV11	94 aa		3.12	□□□□□ -1.91
MARK3-215	ENST00000558787	KRTAP19-8	Q3LI54	63 aa		3.11	□□□□□ -1.91
MARK3-215	ENST00000558787	SPRR2G	Q9BYE4	73 aa		3.11	□□□□□ -1.91
MARK3-215	ENST00000558787	SERP1	Q9Y6X1	66 aa		3.11	□□□□□ -1.91
MARK3-215	ENST00000558787	MUC12	Q9UKN1	5478 aa		3.1	□□□□□ -1.91
MARK3-215	ENST00000558787	NDUFAF8	A1L188	74 aa		3.1	□□□□□ -1.91
MARK3-215	ENST00000558787		H0YAA0	97 aa		3.09	□□□□□ -1.91
MARK3-215	ENST00000558787	SEC61G	P60059	68 aa		3.05	□□□□□ -1.92
MARK3-215	ENST00000558787	RPS28	P62857	69 aa	Known RBP	3.05	□□□□□ -1.92
MARK3-215	ENST00000558787	MDN1	Q9NU22	5596 aa		3.04	□□□□□ -1.92
MARK3-215	ENST00000558787	ADM2	Q7Z4H4	148 aa		3.04	□□□□□ -1.92
MARK3-215	ENST00000558787	KMT2D	O14686	5537 aa		3.04	□□□□□ -1.92
MARK3-215	ENST00000558787	KRTAP4-3	Q9BYR4	195 aa		3.03	□□□□□ -1.92
MARK3-215	ENST00000558787	SMIM26	A0A096LP01	95 aa		3.01	□□□□□ -1.93
MARK3-215	ENST00000558787	KRTAP20-1	Q3LI63	56 aa		3.01	□□□□□ -1.93
MARK3-215	ENST00000558787	PRR15L	Q9BU68	103 aa		3.01	□□□□□ -1.93
MARK3-215	ENST00000558787	CRIPT	Q9P021	101 aa		3.01	□□□□□ -1.93
MARK3-215	ENST00000558787		V9GYY9	64 aa		3.01	□□□□□ -1.93
MARK3-215	ENST00000558787		A0A1B0GU69	56 aa		3	□□□□□ -1.93
MARK3-215	ENST00000558787	LINC01558	Q9Y6Z2	57 aa		3	□□□□□ -1.93
MARK3-215	ENST00000558787		Q1T7F1	81 aa		2.98	□□□□□ -1.93
MARK3-215	ENST00000558787	LCE3A	Q5TA76	89 aa		2.98	□□□□□ -1.93
MARK3-215	ENST00000558787		P0C880	135 aa		2.97	□□□□□ -1.93
MARK3-215	ENST00000558787	LCE3E	Q5T5B0	92 aa		2.97	□□□□□ -1.93

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