RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
CDC42BPB-202ENST00000558321 UQCRQO14949 82 aa5.59□□□□□ -1.51
CDC42BPB-202ENST00000558321 Q5VV11 94 aa5.58□□□□□ -1.52
CDC42BPB-202ENST00000558321 H0Y9P7 68 aa5.57□□□□□ -1.52
CDC42BPB-202ENST00000558321 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
CDC42BPB-202ENST00000558321 ATOX1O00244 68 aa5.56□□□□□ -1.52
CDC42BPB-202ENST00000558321 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
CDC42BPB-202ENST00000558321 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
CDC42BPB-202ENST00000558321 A0A087WVE0 104 aa5.55□□□□□ -1.52
CDC42BPB-202ENST00000558321 A6NN06 94 aa5.54□□□□□ -1.52
CDC42BPB-202ENST00000558321 LINC00643Q86TS7 51 aa5.54□□□□□ -1.52
CDC42BPB-202ENST00000558321 MT1BP07438 61 aa5.53□□□□□ -1.52
CDC42BPB-202ENST00000558321 NDUFC1O43677 76 aa5.52□□□□□ -1.53
CDC42BPB-202ENST00000558321 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
CDC42BPB-202ENST00000558321 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
CDC42BPB-202ENST00000558321 IMUPQ9GZP8 106 aa5.51□□□□□ -1.53
CDC42BPB-202ENST00000558321 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
CDC42BPB-202ENST00000558321 LINC00208Q96KT6 92 aa5.49□□□□□ -1.53
CDC42BPB-202ENST00000558321 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
CDC42BPB-202ENST00000558321 A8MUN3 132 aa5.46□□□□□ -1.54
CDC42BPB-202ENST00000558321 H3BS24 57 aa5.46□□□□□ -1.54
CDC42BPB-202ENST00000558321 MP68P56378 58 aa5.45□□□□□ -1.54
CDC42BPB-202ENST00000558321 A0A1B0GV90 55 aa5.44□□□□□ -1.54
CDC42BPB-202ENST00000558321 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
CDC42BPB-202ENST00000558321 H0YAA0 97 aa5.42□□□□□ -1.54
CDC42BPB-202ENST00000558321 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
CDC42BPB-202ENST00000558321 OCR1Q9BZK8 76 aa5.41□□□□□ -1.54
CDC42BPB-202ENST00000558321 J3QR89 54 aa5.39□□□□□ -1.55
CDC42BPB-202ENST00000558321 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
CDC42BPB-202ENST00000558321 SCGB1A1P11684 91 aa5.37□□□□□ -1.55
CDC42BPB-202ENST00000558321 H3BPC8 53 aa5.35□□□□□ -1.55
CDC42BPB-202ENST00000558321 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
CDC42BPB-202ENST00000558321 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
CDC42BPB-202ENST00000558321 C20orf197Q8N268 126 aa5.29□□□□□ -1.56
CDC42BPB-202ENST00000558321 PLAC4Q8WY50 150 aa5.28□□□□□ -1.56
CDC42BPB-202ENST00000558321 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
CDC42BPB-202ENST00000558321 R4GN34 69 aa5.28□□□□□ -1.56
CDC42BPB-202ENST00000558321 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
CDC42BPB-202ENST00000558321 P0C880 135 aa5.25□□□□□ -1.57
CDC42BPB-202ENST00000558321 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
CDC42BPB-202ENST00000558321 M0QZ58 72 aa5.23□□□□□ -1.57
CDC42BPB-202ENST00000558321 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
CDC42BPB-202ENST00000558321 NEBP20929 6669 aa5.2□□□□□ -1.58
CDC42BPB-202ENST00000558321 ACYP2P14621 99 aa5.2□□□□□ -1.58
CDC42BPB-202ENST00000558321 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
CDC42BPB-202ENST00000558321 TRAV7A0A075B6U4 112 aa5.19□□□□□ -1.58
CDC42BPB-202ENST00000558321 LINC01554Q52M75 96 aa5.19□□□□□ -1.58
CDC42BPB-202ENST00000558321 MT1XP80297 61 aa5.18□□□□□ -1.58
CDC42BPB-202ENST00000558321 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
CDC42BPB-202ENST00000558321 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
CDC42BPB-202ENST00000558321 MT-ATP8P03928 68 aa5.17□□□□□ -1.58
CDC42BPB-202ENST00000558321 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
CDC42BPB-202ENST00000558321 K7ERU9 68 aa5.15□□□□□ -1.59
CDC42BPB-202ENST00000558321 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
CDC42BPB-202ENST00000558321 KMT2DO14686 5537 aa5.12□□□□□ -1.59
CDC42BPB-202ENST00000558321 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
CDC42BPB-202ENST00000558321 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
CDC42BPB-202ENST00000558321 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
CDC42BPB-202ENST00000558321 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
CDC42BPB-202ENST00000558321 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
CDC42BPB-202ENST00000558321 SNURFQ9Y675 71 aa5.07□□□□□ -1.6
CDC42BPB-202ENST00000558321 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
CDC42BPB-202ENST00000558321 SPRR2EP22531 72 aa5.04□□□□□ -1.6
CDC42BPB-202ENST00000558321 SPRR2BP35325 72 aa5.04□□□□□ -1.6
CDC42BPB-202ENST00000558321 SPRR2AP35326 72 aa5.04□□□□□ -1.6
CDC42BPB-202ENST00000558321 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
CDC42BPB-202ENST00000558321 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
CDC42BPB-202ENST00000558321 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
CDC42BPB-202ENST00000558321 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
CDC42BPB-202ENST00000558321 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
CDC42BPB-202ENST00000558321 SERP2Q8N6R1 65 aa4.97□□□□□ -1.61
CDC42BPB-202ENST00000558321 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPB-202ENST00000558321 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
CDC42BPB-202ENST00000558321 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
CDC42BPB-202ENST00000558321 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
CDC42BPB-202ENST00000558321 SPRR2DP22532 72 aa4.87□□□□□ -1.63
CDC42BPB-202ENST00000558321 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
CDC42BPB-202ENST00000558321 COA5Q86WW8 74 aa4.87□□□□□ -1.63
CDC42BPB-202ENST00000558321 SEC61GP60059 68 aa4.86□□□□□ -1.63
CDC42BPB-202ENST00000558321 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
CDC42BPB-202ENST00000558321 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
CDC42BPB-202ENST00000558321 SERP1Q9Y6X1 66 aa4.84□□□□□ -1.63
CDC42BPB-202ENST00000558321 COX7CP15954 63 aa4.8□□□□□ -1.64
CDC42BPB-202ENST00000558321 A0A0D9SG42 100 aa4.79□□□□□ -1.64
CDC42BPB-202ENST00000558321 A0A1B0GU33 70 aa4.75□□□□□ -1.65
CDC42BPB-202ENST00000558321 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
CDC42BPB-202ENST00000558321 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
CDC42BPB-202ENST00000558321 H7BZZ5 65 aa4.72□□□□□ -1.65
CDC42BPB-202ENST00000558321 CYSTM1Q9H1C7 97 aa4.69□□□□□ -1.66
CDC42BPB-202ENST00000558321 A0A1B0GU69 56 aa4.65□□□□□ -1.67
CDC42BPB-202ENST00000558321 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
CDC42BPB-202ENST00000558321 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
CDC42BPB-202ENST00000558321 ANAPC13Q9BS18 74 aa4.63□□□□□ -1.67
CDC42BPB-202ENST00000558321 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
CDC42BPB-202ENST00000558321 MT1EP04732 61 aa4.6□□□□□ -1.67
CDC42BPB-202ENST00000558321 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
CDC42BPB-202ENST00000558321 A8MU10 97 aa4.56□□□□□ -1.68
CDC42BPB-202ENST00000558321 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
CDC42BPB-202ENST00000558321 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
CDC42BPB-202ENST00000558321 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms