RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 A0A1W2PPM0 123 aa2.7□□□□□ -1.98
RTF1-204ENST00000558117 J3QR89 54 aa2.7□□□□□ -1.98
RTF1-204ENST00000558117 IGKV4-1P06312 121 aa2.7□□□□□ -1.98
RTF1-204ENST00000558117 S100A7L2Q5SY68 101 aa2.7□□□□□ -1.98
RTF1-204ENST00000558117 SMIM11BQ8TCY0 68 aa2.7□□□□□ -1.98
RTF1-204ENST00000558117 CLEC2BQ92478 149 aa2.7□□□□□ -1.98
RTF1-204ENST00000558117 TRAV13-2A0A0B4J235 113 aa2.69□□□□□ -1.98
RTF1-204ENST00000558117 SPRR2DP22532 72 aa2.69□□□□□ -1.98
RTF1-204ENST00000558117 C22orf24Q9Y442 160 aa2.69□□□□□ -1.98
RTF1-204ENST00000558117 SPCS1Q9Y6A9 102 aa2.69□□□□□ -1.98
RTF1-204ENST00000558117 K7ERU9 68 aa2.68□□□□□ -1.98
RTF1-204ENST00000558117 UQCRQO14949 82 aa2.68□□□□□ -1.98
RTF1-204ENST00000558117 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
RTF1-204ENST00000558117 Q9BRP9 147 aa2.68□□□□□ -1.98
RTF1-204ENST00000558117 K7EP34 96 aa2.67□□□□□ -1.98
RTF1-204ENST00000558117 IGLV6-57P01721 117 aa2.67□□□□□ -1.98
RTF1-204ENST00000558117 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
RTF1-204ENST00000558117 TRAV23DV6A0A075B6W5 121 aa2.66□□□□□ -1.98
RTF1-204ENST00000558117 ROMO1P60602 79 aa2.66□□□□□ -1.98
RTF1-204ENST00000558117 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
RTF1-204ENST00000558117 FAM236AA0A1B0GUQ0 79 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 FAM236BA0A1B0GV22 79 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 COX6CP09669 75 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 COX7BP24311 80 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 ATXN8Q156A1 80 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 GTF2H5Q6ZYL4 71 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 SPRR2FQ96RM1 72 aa2.65□□□□□ -1.99
RTF1-204ENST00000558117 ETDCA0A1B0GVM5 59 aa2.64□□□□□ -1.99
RTF1-204ENST00000558117 TMEM258P61165 79 aa2.64□□□□□ -1.99
RTF1-204ENST00000558117 TEN1Q86WV5 123 aa2.64□□□□□ -1.99
RTF1-204ENST00000558117 DEFB105AQ8NG35 78 aa2.64□□□□□ -1.99
RTF1-204ENST00000558117 KCNQ1DNQ9H478 68 aa2.64□□□□□ -1.99
RTF1-204ENST00000558117 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 hADV29S1A0JD25 119 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 A6NN06 94 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 H0YGX0 51 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 ERC2-IT1O76042 136 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 BAALC-AS2P0C853 105 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 PRLHP81277 87 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 LINC00575Q6W349 94 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 C14orf132Q9NPU4 83 aa2.63□□□□□ -1.99
RTF1-204ENST00000558117 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
RTF1-204ENST00000558117 OCIAD2Q56VL3 154 aa2.62□□□□□ -1.99
RTF1-204ENST00000558117 DNAL4O96015 105 aa2.61□□□□□ -1.99
RTF1-204ENST00000558117 Q6ZQY7 126 aa2.61□□□□□ -1.99
RTF1-204ENST00000558117 F8W1H4 67 aa2.6□□□□□ -1.99
RTF1-204ENST00000558117 BCE1O60756 84 aa2.6□□□□□ -1.99
RTF1-204ENST00000558117 TRACP01848 142 aa2.6□□□□□ -1.99
RTF1-204ENST00000558117 SPRR1AP35321 89 aa2.6□□□□□ -1.99
RTF1-204ENST00000558117 ETDBQ3ZM63 59 aa2.6□□□□□ -1.99
RTF1-204ENST00000558117 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
RTF1-204ENST00000558117 A0A0G2JQZ4 141 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 TEX49A0A1B0GTD5 131 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 hDV103S1A0JD37 113 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 SNCGO76070 127 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 SPINK1P00995 79 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 Q6ZRX8 168 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 ORMDL1Q9P0S3 153 aa2.59□□□□□ -1.99
RTF1-204ENST00000558117 C9orf92A6NGG3 77 aa2.58□□□□□ -2
RTF1-204ENST00000558117 KRTAP13-1Q8IUC0 172 aa2.58□□□□□ -2
RTF1-204ENST00000558117 A0A087WSZ3 146 aa2.57□□□□□ -2
RTF1-204ENST00000558117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.57□□□□□ -2
RTF1-204ENST00000558117 RPL37P61927 97 aaKnown RBP2.55□□□□□ -2
RTF1-204ENST00000558117 PPDPFLQ8WWR9 84 aa2.55□□□□□ -2
RTF1-204ENST00000558117 SPRR4Q96PI1 79 aa2.55□□□□□ -2
RTF1-204ENST00000558117 P0C880 135 aa2.54□□□□□ -2
RTF1-204ENST00000558117 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
RTF1-204ENST00000558117 RBM3P98179 157 aaKnown RBP2.54□□□□□ -2
RTF1-204ENST00000558117 IGLV5-48A0A075B6I7 105 aa2.53□□□□□ -2
RTF1-204ENST00000558117 F8WEM9 126 aa2.53□□□□□ -2
RTF1-204ENST00000558117 C9orf153Q5TBE3 101 aa2.53□□□□□ -2
RTF1-204ENST00000558117 TMEM254Q8TBM7 123 aa2.53□□□□□ -2
RTF1-204ENST00000558117 OBSCN-AS1Q96MR7 158 aa2.53□□□□□ -2
RTF1-204ENST00000558117 JMJD7-PLA2G4BH0Y9G9 81 aa2.52□□□□□ -2.01
RTF1-204ENST00000558117 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
RTF1-204ENST00000558117 CCKP06307 115 aa2.52□□□□□ -2.01
RTF1-204ENST00000558117 DSCR8Q96T75 97 aa2.52□□□□□ -2.01
RTF1-204ENST00000558117 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
RTF1-204ENST00000558117 SPRR1BP22528 89 aa2.51□□□□□ -2.01
RTF1-204ENST00000558117 LOC110117498A0A087WWA1 95 aa2.5□□□□□ -2.01
RTF1-204ENST00000558117 TRBV7-4A0A0J9YYF1 115 aa2.5□□□□□ -2.01
RTF1-204ENST00000558117 CCDC179H3BU77 68 aa2.5□□□□□ -2.01
RTF1-204ENST00000558117 Q1T7F1 81 aa2.5□□□□□ -2.01
RTF1-204ENST00000558117 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
RTF1-204ENST00000558117 IGKV3D-7A0A0C4DH55 119 aa2.49□□□□□ -2.01
RTF1-204ENST00000558117 MT-ATP8P03928 68 aa2.48□□□□□ -2.01
RTF1-204ENST00000558117 ATP11AUNQ6ZP68 121 aa2.48□□□□□ -2.01
RTF1-204ENST00000558117 PDE6GP18545 87 aa2.47□□□□□ -2.01
RTF1-204ENST00000558117 NREPQ16612 68 aa2.47□□□□□ -2.01
RTF1-204ENST00000558117 Q6JHZ5 121 aa2.47□□□□□ -2.01
RTF1-204ENST00000558117 ACYP1P07311 99 aa2.46□□□□□ -2.02
RTF1-204ENST00000558117 CASC2Q6XLA1 102 aa2.46□□□□□ -2.02
RTF1-204ENST00000558117 UBL5Q9BZL1 73 aa2.46□□□□□ -2.02
RTF1-204ENST00000558117 TRBV7-7A0A0K0K1E9 115 aa2.45□□□□□ -2.02
RTF1-204ENST00000558117 MT1BP07438 61 aa2.45□□□□□ -2.02
RTF1-204ENST00000558117 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
RTF1-204ENST00000558117 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
RTF1-204ENST00000558117 SSBP3-AS1Q7Z2R9 100 aa2.45□□□□□ -2.02
RTF1-204ENST00000558117 LINC00643Q86TS7 51 aa2.44□□□□□ -2.02
RTF1-204ENST00000558117 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms