RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 A8MUU9 505 aa6.97□□□□□ -1.29
SRSF5-215ENST00000556587 ATP11AUNQ6ZP68 121 aa6.97□□□□□ -1.29
SRSF5-215ENST00000556587 A0A1B0GU69 56 aa6.93□□□□□ -1.3
SRSF5-215ENST00000556587 SPTSSBQ8NFR3 76 aa6.93□□□□□ -1.3
SRSF5-215ENST00000556587 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
SRSF5-215ENST00000556587 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
SRSF5-215ENST00000556587 LCA10Q71F78 164 aa6.91□□□□□ -1.3
SRSF5-215ENST00000556587 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
SRSF5-215ENST00000556587 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
SRSF5-215ENST00000556587 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
SRSF5-215ENST00000556587 SPINK7P58062 85 aa6.86□□□□□ -1.31
SRSF5-215ENST00000556587 A8MU10 97 aa6.82□□□□□ -1.32
SRSF5-215ENST00000556587 UQCR11O14957 56 aa6.82□□□□□ -1.32
SRSF5-215ENST00000556587 FAT4Q6V0I7 4981 aa6.78□□□□□ -1.32
SRSF5-215ENST00000556587 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
SRSF5-215ENST00000556587 A6NN06 94 aa6.75□□□□□ -1.33
SRSF5-215ENST00000556587 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
SRSF5-215ENST00000556587 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
SRSF5-215ENST00000556587 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
SRSF5-215ENST00000556587 KRTAP9-2Q9BYQ4 174 aa6.73□□□□□ -1.33
SRSF5-215ENST00000556587 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
SRSF5-215ENST00000556587 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
SRSF5-215ENST00000556587 MUC17Q685J3 4493 aa6.69□□□□□ -1.34
SRSF5-215ENST00000556587 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
SRSF5-215ENST00000556587 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
SRSF5-215ENST00000556587 XP32Q5T750 250 aa6.62□□□□□ -1.35
SRSF5-215ENST00000556587 A0A1B0GU33 70 aa6.58□□□□□ -1.36
SRSF5-215ENST00000556587 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
SRSF5-215ENST00000556587 H1FX-AS1Q4G0G2 97 aa6.55□□□□□ -1.36
SRSF5-215ENST00000556587 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
SRSF5-215ENST00000556587 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
SRSF5-215ENST00000556587 S4R3F8 94 aa6.49□□□□□ -1.37
SRSF5-215ENST00000556587 H0YAA0 97 aa6.48□□□□□ -1.37
SRSF5-215ENST00000556587 K7ERS5 55 aa6.47□□□□□ -1.37
SRSF5-215ENST00000556587 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
SRSF5-215ENST00000556587 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
SRSF5-215ENST00000556587 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
SRSF5-215ENST00000556587 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
SRSF5-215ENST00000556587 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
SRSF5-215ENST00000556587 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
SRSF5-215ENST00000556587 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
SRSF5-215ENST00000556587 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
SRSF5-215ENST00000556587 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
SRSF5-215ENST00000556587 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
SRSF5-215ENST00000556587 MT1HP80294 61 aa6.29□□□□□ -1.4
SRSF5-215ENST00000556587 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
SRSF5-215ENST00000556587 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
SRSF5-215ENST00000556587 M0QZ58 72 aa6.22□□□□□ -1.41
SRSF5-215ENST00000556587 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
SRSF5-215ENST00000556587 P0C880 135 aa6.2□□□□□ -1.42
SRSF5-215ENST00000556587 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
SRSF5-215ENST00000556587 ROMO1P60602 79 aa6.18□□□□□ -1.42
SRSF5-215ENST00000556587 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
SRSF5-215ENST00000556587 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
SRSF5-215ENST00000556587 A0A0D9SG42 100 aa6.17□□□□□ -1.42
SRSF5-215ENST00000556587 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
SRSF5-215ENST00000556587 M0R2T5 61 aa6.08□□□□□ -1.44
SRSF5-215ENST00000556587 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
SRSF5-215ENST00000556587 KRTAP12-1P59990 96 aa6.02□□□□□ -1.44
SRSF5-215ENST00000556587 R4GN34 69 aa6.02□□□□□ -1.44
SRSF5-215ENST00000556587 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
SRSF5-215ENST00000556587 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
SRSF5-215ENST00000556587 USH2AO75445 5202 aa5.97□□□□□ -1.45
SRSF5-215ENST00000556587 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
SRSF5-215ENST00000556587 LCE2BO14633 110 aa5.95□□□□□ -1.46
SRSF5-215ENST00000556587 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
SRSF5-215ENST00000556587 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
SRSF5-215ENST00000556587 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
SRSF5-215ENST00000556587 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
SRSF5-215ENST00000556587 MT2AP02795 61 aa5.81□□□□□ -1.48
SRSF5-215ENST00000556587 MT1FP04733 61 aa5.78□□□□□ -1.48
SRSF5-215ENST00000556587 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
SRSF5-215ENST00000556587 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
SRSF5-215ENST00000556587 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
SRSF5-215ENST00000556587 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
SRSF5-215ENST00000556587 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
SRSF5-215ENST00000556587 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
SRSF5-215ENST00000556587 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
SRSF5-215ENST00000556587 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
SRSF5-215ENST00000556587 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
SRSF5-215ENST00000556587 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
SRSF5-215ENST00000556587 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SRSF5-215ENST00000556587 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
SRSF5-215ENST00000556587 TNP1P09430 55 aa5.51□□□□□ -1.53
SRSF5-215ENST00000556587 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
SRSF5-215ENST00000556587 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
SRSF5-215ENST00000556587 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
SRSF5-215ENST00000556587 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
SRSF5-215ENST00000556587 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
SRSF5-215ENST00000556587 NEBP20929 6669 aa5.3□□□□□ -1.56
SRSF5-215ENST00000556587 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
SRSF5-215ENST00000556587 MT1BP07438 61 aa5.25□□□□□ -1.57
SRSF5-215ENST00000556587 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
SRSF5-215ENST00000556587 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
SRSF5-215ENST00000556587 KRTAP10-5P60370 271 aa5.15□□□□□ -1.58
SRSF5-215ENST00000556587 KMT2DO14686 5537 aa5.14□□□□□ -1.59
SRSF5-215ENST00000556587 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
SRSF5-215ENST00000556587 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
SRSF5-215ENST00000556587 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
SRSF5-215ENST00000556587 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms