RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 SPRR2FQ96RM1 72 aa7.26□□□□□ -1.25
XRCC3-215ENST00000555964 H0YAA0 97 aa7.24□□□□□ -1.25
XRCC3-215ENST00000555964 SPRR2EP22531 72 aa7.24□□□□□ -1.25
XRCC3-215ENST00000555964 SPRR2BP35325 72 aa7.24□□□□□ -1.25
XRCC3-215ENST00000555964 SPRR2AP35326 72 aa7.24□□□□□ -1.25
XRCC3-215ENST00000555964 LOC101927531A0A1B0GV80 90 aa7.22□□□□□ -1.25
XRCC3-215ENST00000555964 NDUFC1O43677 76 aa7.22□□□□□ -1.25
XRCC3-215ENST00000555964 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
XRCC3-215ENST00000555964 A0A087WVE0 104 aa7.19□□□□□ -1.26
XRCC3-215ENST00000555964 A8MUN3 132 aa7.19□□□□□ -1.26
XRCC3-215ENST00000555964 PRO0461Q9UI25 63 aa7.15□□□□□ -1.26
XRCC3-215ENST00000555964 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
XRCC3-215ENST00000555964 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
XRCC3-215ENST00000555964 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
XRCC3-215ENST00000555964 MT1XP80297 61 aa7.1□□□□□ -1.27
XRCC3-215ENST00000555964 KRTAP2-2Q9BYT5 123 aa7.1□□□□□ -1.27
XRCC3-215ENST00000555964 KRTAP2-1Q9BYU5 128 aa7.1□□□□□ -1.27
XRCC3-215ENST00000555964 K7EP34 96 aa7.09□□□□□ -1.27
XRCC3-215ENST00000555964 ATOX1O00244 68 aa7.09□□□□□ -1.27
XRCC3-215ENST00000555964 ACYP1P07311 99 aa7.09□□□□□ -1.27
XRCC3-215ENST00000555964 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
XRCC3-215ENST00000555964 COL5A1-AS1Q5SY13 56 aa7.06□□□□□ -1.28
XRCC3-215ENST00000555964 LCE1AQ5T7P2 110 aa7.06□□□□□ -1.28
XRCC3-215ENST00000555964 H3BS24 57 aa7.05□□□□□ -1.28
XRCC3-215ENST00000555964 UQCRQO14949 82 aa7.04□□□□□ -1.28
XRCC3-215ENST00000555964 H0Y9P7 68 aa7.02□□□□□ -1.29
XRCC3-215ENST00000555964 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
XRCC3-215ENST00000555964 R4GN34 69 aa7.02□□□□□ -1.29
XRCC3-215ENST00000555964 GTF2H5Q6ZYL4 71 aa7.01□□□□□ -1.29
XRCC3-215ENST00000555964 SPRR2DP22532 72 aa7□□□□□ -1.29
XRCC3-215ENST00000555964 F8W1H4 67 aa6.98□□□□□ -1.29
XRCC3-215ENST00000555964 ATP5EP2Q5VTU8 51 aa6.97□□□□□ -1.29
XRCC3-215ENST00000555964 ETDBQ3ZM63 59 aa6.96□□□□□ -1.3
XRCC3-215ENST00000555964 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
XRCC3-215ENST00000555964 M0QZ58 72 aa6.91□□□□□ -1.3
XRCC3-215ENST00000555964 LOC105371267A0A1B0GV96 52 aa6.88□□□□□ -1.31
XRCC3-215ENST00000555964 LINC00208Q96KT6 92 aa6.87□□□□□ -1.31
XRCC3-215ENST00000555964 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
XRCC3-215ENST00000555964 P0C880 135 aa6.86□□□□□ -1.31
XRCC3-215ENST00000555964 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
XRCC3-215ENST00000555964 FAM240AA0A1B0GVK7 77 aa6.85□□□□□ -1.31
XRCC3-215ENST00000555964 MP68P56378 58 aa6.84□□□□□ -1.31
XRCC3-215ENST00000555964 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
XRCC3-215ENST00000555964 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
XRCC3-215ENST00000555964 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
XRCC3-215ENST00000555964 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
XRCC3-215ENST00000555964 DMAC1Q96GE9 116 aa6.72□□□□□ -1.33
XRCC3-215ENST00000555964 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
XRCC3-215ENST00000555964 OCR1Q9BZK8 76 aa6.71□□□□□ -1.34
XRCC3-215ENST00000555964 H3BPC8 53 aa6.7□□□□□ -1.34
XRCC3-215ENST00000555964 MT-ATP8P03928 68 aa6.67□□□□□ -1.34
XRCC3-215ENST00000555964 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
XRCC3-215ENST00000555964 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
XRCC3-215ENST00000555964 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
XRCC3-215ENST00000555964 SPTSSBQ8NFR3 76 aa6.58□□□□□ -1.36
XRCC3-215ENST00000555964 PCP4L1A6NKN8 68 aa6.53□□□□□ -1.36
XRCC3-215ENST00000555964 ACYP2P14621 99 aa6.52□□□□□ -1.37
XRCC3-215ENST00000555964 SCGB1A1P11684 91 aa6.5□□□□□ -1.37
XRCC3-215ENST00000555964 GPR98Q8WXG9 6306 aa6.46□□□□□ -1.37
XRCC3-215ENST00000555964 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
XRCC3-215ENST00000555964 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
XRCC3-215ENST00000555964 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
XRCC3-215ENST00000555964 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
XRCC3-215ENST00000555964 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
XRCC3-215ENST00000555964 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
XRCC3-215ENST00000555964 J3QR89 54 aa6.34□□□□□ -1.39
XRCC3-215ENST00000555964 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
XRCC3-215ENST00000555964 MT1EP04732 61 aa6.33□□□□□ -1.4
XRCC3-215ENST00000555964 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
XRCC3-215ENST00000555964 SMIM20Q8N5G0 67 aa6.26□□□□□ -1.41
XRCC3-215ENST00000555964 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
XRCC3-215ENST00000555964 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
XRCC3-215ENST00000555964 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
XRCC3-215ENST00000555964 MT1GP13640 62 aa6.19□□□□□ -1.42
XRCC3-215ENST00000555964 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
XRCC3-215ENST00000555964 A0A0D9SG42 100 aa6.15□□□□□ -1.42
XRCC3-215ENST00000555964 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
XRCC3-215ENST00000555964 SPANXA2-OT1Q8N9U9 137 aa6.14□□□□□ -1.43
XRCC3-215ENST00000555964 MT4P47944 62 aa6.13□□□□□ -1.43
XRCC3-215ENST00000555964 A0A1B0GV90 55 aa6.12□□□□□ -1.43
XRCC3-215ENST00000555964 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
XRCC3-215ENST00000555964 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
XRCC3-215ENST00000555964 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
XRCC3-215ENST00000555964 SEC61GP60059 68 aa6.08□□□□□ -1.44
XRCC3-215ENST00000555964 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
XRCC3-215ENST00000555964 MT1MQ8N339 61 aa6.05□□□□□ -1.44
XRCC3-215ENST00000555964 HMCN1Q96RW7 5635 aa6.04□□□□□ -1.44
XRCC3-215ENST00000555964 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
XRCC3-215ENST00000555964 MT1LQ93083 61 aa5.99□□□□□ -1.45
XRCC3-215ENST00000555964 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
XRCC3-215ENST00000555964 KRTAP5-10Q6L8G5 202 aa5.96□□□□□ -1.46
XRCC3-215ENST00000555964 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
XRCC3-215ENST00000555964 COA5Q86WW8 74 aa5.95□□□□□ -1.46
XRCC3-215ENST00000555964 A0A1B0GU33 70 aa5.94□□□□□ -1.46
XRCC3-215ENST00000555964 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
XRCC3-215ENST00000555964 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
XRCC3-215ENST00000555964 K7ERU9 68 aa5.89□□□□□ -1.47
XRCC3-215ENST00000555964 SERP2Q8N6R1 65 aa5.87□□□□□ -1.47
XRCC3-215ENST00000555964 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
XRCC3-215ENST00000555964 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms