RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
ACTN1-215ENST00000555616 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
ACTN1-215ENST00000555616 M0R2T5 61 aa4.92□□□□□ -1.62
ACTN1-215ENST00000555616 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
ACTN1-215ENST00000555616 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
ACTN1-215ENST00000555616 V9GYY9 64 aa4.91□□□□□ -1.62
ACTN1-215ENST00000555616 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
ACTN1-215ENST00000555616 HRES1P13985 223 aa4.86□□□□□ -1.63
ACTN1-215ENST00000555616 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
ACTN1-215ENST00000555616 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
ACTN1-215ENST00000555616 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
ACTN1-215ENST00000555616 C4orf26Q17RF5 130 aa4.83□□□□□ -1.64
ACTN1-215ENST00000555616 DMAC1Q96GE9 116 aa4.79□□□□□ -1.64
ACTN1-215ENST00000555616 A8MUN3 132 aa4.78□□□□□ -1.64
ACTN1-215ENST00000555616 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
ACTN1-215ENST00000555616 ACYP2P14621 99 aa4.77□□□□□ -1.65
ACTN1-215ENST00000555616 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
ACTN1-215ENST00000555616 COA5Q86WW8 74 aa4.75□□□□□ -1.65
ACTN1-215ENST00000555616 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
ACTN1-215ENST00000555616 MT2AP02795 61 aa4.72□□□□□ -1.65
ACTN1-215ENST00000555616 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
ACTN1-215ENST00000555616 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
ACTN1-215ENST00000555616 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
ACTN1-215ENST00000555616 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
ACTN1-215ENST00000555616 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
ACTN1-215ENST00000555616 CHKB-CPT1BH3BT56 60 aa4.69□□□□□ -1.66
ACTN1-215ENST00000555616 MT1FP04733 61 aa4.68□□□□□ -1.66
ACTN1-215ENST00000555616 S4R3F8 94 aa4.68□□□□□ -1.66
ACTN1-215ENST00000555616 USH2AO75445 5202 aa4.66□□□□□ -1.66
ACTN1-215ENST00000555616 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
ACTN1-215ENST00000555616 Q1T7F1 81 aa4.63□□□□□ -1.67
ACTN1-215ENST00000555616 LCA10Q71F78 164 aa4.63□□□□□ -1.67
ACTN1-215ENST00000555616 SPTSSBQ8NFR3 76 aa4.63□□□□□ -1.67
ACTN1-215ENST00000555616 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
ACTN1-215ENST00000555616 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
ACTN1-215ENST00000555616 CSAG1Q6PB30 78 aa4.61□□□□□ -1.67
ACTN1-215ENST00000555616 LCE2BO14633 110 aa4.6□□□□□ -1.67
ACTN1-215ENST00000555616 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
ACTN1-215ENST00000555616 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
ACTN1-215ENST00000555616 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
ACTN1-215ENST00000555616 PSPHP1O15172 72 aa4.51□□□□□ -1.69
ACTN1-215ENST00000555616 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
ACTN1-215ENST00000555616 A0A1B0GU69 56 aa4.5□□□□□ -1.69
ACTN1-215ENST00000555616 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
ACTN1-215ENST00000555616 H0YAA0 97 aa4.48□□□□□ -1.69
ACTN1-215ENST00000555616 Q5VV11 94 aa4.48□□□□□ -1.69
ACTN1-215ENST00000555616 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
ACTN1-215ENST00000555616 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
ACTN1-215ENST00000555616 ADM2Q7Z4H4 148 aa4.44□□□□□ -1.7
ACTN1-215ENST00000555616 A6NED7 52 aa4.4□□□□□ -1.71
ACTN1-215ENST00000555616 UQCR11O14957 56 aa4.37□□□□□ -1.71
ACTN1-215ENST00000555616 CRIPTQ9P021 101 aa4.37□□□□□ -1.71
ACTN1-215ENST00000555616 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
ACTN1-215ENST00000555616 A0A1B0GU33 70 aa4.36□□□□□ -1.71
ACTN1-215ENST00000555616 P0C880 135 aa4.36□□□□□ -1.71
ACTN1-215ENST00000555616 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
ACTN1-215ENST00000555616 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
ACTN1-215ENST00000555616 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
ACTN1-215ENST00000555616 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
ACTN1-215ENST00000555616 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
ACTN1-215ENST00000555616 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
ACTN1-215ENST00000555616 R4GN34 69 aa4.32□□□□□ -1.72
ACTN1-215ENST00000555616 MT1BP07438 61 aa4.31□□□□□ -1.72
ACTN1-215ENST00000555616 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
ACTN1-215ENST00000555616 M0QZ58 72 aa4.3□□□□□ -1.72
ACTN1-215ENST00000555616 A8MU10 97 aa4.24□□□□□ -1.73
ACTN1-215ENST00000555616 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
ACTN1-215ENST00000555616 A6NN06 94 aa4.23□□□□□ -1.73
ACTN1-215ENST00000555616 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
ACTN1-215ENST00000555616 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
ACTN1-215ENST00000555616 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
ACTN1-215ENST00000555616 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
ACTN1-215ENST00000555616 A0A0D9SG42 100 aa4.16□□□□□ -1.74
ACTN1-215ENST00000555616 K7ERS5 55 aa4.15□□□□□ -1.75
ACTN1-215ENST00000555616 NEBP20929 6669 aa4.14□□□□□ -1.75
ACTN1-215ENST00000555616 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
ACTN1-215ENST00000555616 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
ACTN1-215ENST00000555616 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
ACTN1-215ENST00000555616 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
ACTN1-215ENST00000555616 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
ACTN1-215ENST00000555616 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
ACTN1-215ENST00000555616 MT1XP80297 61 aa4.04□□□□□ -1.76
ACTN1-215ENST00000555616 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
ACTN1-215ENST00000555616 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
ACTN1-215ENST00000555616 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
ACTN1-215ENST00000555616 KMT2DO14686 5537 aa4.01□□□□□ -1.77
ACTN1-215ENST00000555616 ROMO1P60602 79 aa3.96□□□□□ -1.78
ACTN1-215ENST00000555616 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
ACTN1-215ENST00000555616 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
ACTN1-215ENST00000555616 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
ACTN1-215ENST00000555616 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
ACTN1-215ENST00000555616 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
ACTN1-215ENST00000555616 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
ACTN1-215ENST00000555616 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
ACTN1-215ENST00000555616 SPRR2EP22531 72 aa3.84□□□□□ -1.79
ACTN1-215ENST00000555616 SPRR2BP35325 72 aa3.84□□□□□ -1.79
ACTN1-215ENST00000555616 SPRR2AP35326 72 aa3.84□□□□□ -1.79
ACTN1-215ENST00000555616 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
ACTN1-215ENST00000555616 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
ACTN1-215ENST00000555616 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms