RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 KRTAP9-7A8MTY7 169 aa8.51□□□□□ -1.05
HDAC4-217ENST00000553145 KLKP1Q107X0 134 aa8.51□□□□□ -1.05
HDAC4-217ENST00000553145 MP68P56378 58 aa8.46□□□□□ -1.06
HDAC4-217ENST00000553145 SPRR2GQ9BYE4 73 aa8.45□□□□□ -1.06
HDAC4-217ENST00000553145 MACF1Q9UPN3 7388 aaKnown RBP8.45□□□□□ -1.06
HDAC4-217ENST00000553145 MT1BP07438 61 aa8.43□□□□□ -1.06
HDAC4-217ENST00000553145 A8MUN3 132 aa8.41□□□□□ -1.06
HDAC4-217ENST00000553145 KRTAP19-8Q3LI54 63 aa8.4□□□□□ -1.06
HDAC4-217ENST00000553145 NDUFC1O43677 76 aa8.39□□□□□ -1.07
HDAC4-217ENST00000553145 Q5VV11 94 aa8.36□□□□□ -1.07
HDAC4-217ENST00000553145 H3BPC8 53 aa8.35□□□□□ -1.07
HDAC4-217ENST00000553145 SCGB1A1P11684 91 aa8.35□□□□□ -1.07
HDAC4-217ENST00000553145 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
HDAC4-217ENST00000553145 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
HDAC4-217ENST00000553145 H0YAA0 97 aa8.32□□□□□ -1.08
HDAC4-217ENST00000553145 MT-ATP8P03928 68 aa8.31□□□□□ -1.08
HDAC4-217ENST00000553145 CRIPTQ9P021 101 aa8.3□□□□□ -1.08
HDAC4-217ENST00000553145 K7ERU9 68 aa8.27□□□□□ -1.09
HDAC4-217ENST00000553145 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
HDAC4-217ENST00000553145 A6NN06 94 aa8.24□□□□□ -1.09
HDAC4-217ENST00000553145 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
HDAC4-217ENST00000553145 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
HDAC4-217ENST00000553145 TRAV7A0A075B6U4 112 aa8.16□□□□□ -1.1
HDAC4-217ENST00000553145 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
HDAC4-217ENST00000553145 KRTAP6-3Q3LI67 103 aa8.12□□□□□ -1.11
HDAC4-217ENST00000553145 P0C880 135 aa8.1□□□□□ -1.11
HDAC4-217ENST00000553145 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
HDAC4-217ENST00000553145 ACYP2P14621 99 aa8.02□□□□□ -1.13
HDAC4-217ENST00000553145 SNURFQ9Y675 71 aa8.01□□□□□ -1.13
HDAC4-217ENST00000553145 C20orf197Q8N268 126 aa8□□□□□ -1.13
HDAC4-217ENST00000553145 R4GN34 69 aa8□□□□□ -1.13
HDAC4-217ENST00000553145 M0QZ58 72 aa7.96□□□□□ -1.14
HDAC4-217ENST00000553145 SERP2Q8N6R1 65 aa7.92□□□□□ -1.14
HDAC4-217ENST00000553145 MT1XP80297 61 aa7.91□□□□□ -1.14
HDAC4-217ENST00000553145 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
HDAC4-217ENST00000553145 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
HDAC4-217ENST00000553145 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
HDAC4-217ENST00000553145 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
HDAC4-217ENST00000553145 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
HDAC4-217ENST00000553145 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
HDAC4-217ENST00000553145 NEBP20929 6669 aa7.84□□□□□ -1.15
HDAC4-217ENST00000553145 KRTAP5-9P26371 169 aa7.8□□□□□ -1.16
HDAC4-217ENST00000553145 MUC12Q9UKN1 5478 aa7.8□□□□□ -1.16
HDAC4-217ENST00000553145 KMT2DO14686 5537 aa7.71□□□□□ -1.17
HDAC4-217ENST00000553145 COX7CP15954 63 aa7.69□□□□□ -1.18
HDAC4-217ENST00000553145 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
HDAC4-217ENST00000553145 COA5Q86WW8 74 aa7.67□□□□□ -1.18
HDAC4-217ENST00000553145 CYSTM1Q9H1C7 97 aa7.64□□□□□ -1.19
HDAC4-217ENST00000553145 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
HDAC4-217ENST00000553145 MDN1Q9NU22 5596 aa7.6□□□□□ -1.19
HDAC4-217ENST00000553145 H7BZZ5 65 aa7.59□□□□□ -1.19
HDAC4-217ENST00000553145 SPRR2FQ96RM1 72 aa7.58□□□□□ -1.2
HDAC4-217ENST00000553145 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
HDAC4-217ENST00000553145 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
HDAC4-217ENST00000553145 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
HDAC4-217ENST00000553145 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
HDAC4-217ENST00000553145 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
HDAC4-217ENST00000553145 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
HDAC4-217ENST00000553145 SPRR2EP22531 72 aa7.45□□□□□ -1.22
HDAC4-217ENST00000553145 SPRR2BP35325 72 aa7.45□□□□□ -1.22
HDAC4-217ENST00000553145 SPRR2AP35326 72 aa7.45□□□□□ -1.22
HDAC4-217ENST00000553145 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
HDAC4-217ENST00000553145 SEC61GP60059 68 aa7.43□□□□□ -1.22
HDAC4-217ENST00000553145 SERP1Q9Y6X1 66 aa7.43□□□□□ -1.22
HDAC4-217ENST00000553145 LCE1AQ5T7P2 110 aa7.38□□□□□ -1.23
HDAC4-217ENST00000553145 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
HDAC4-217ENST00000553145 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
HDAC4-217ENST00000553145 A0A0D9SG42 100 aa7.36□□□□□ -1.23
HDAC4-217ENST00000553145 A0A1B0GU33 70 aa7.35□□□□□ -1.23
HDAC4-217ENST00000553145 CCDC179H3BU77 68 aa7.35□□□□□ -1.23
HDAC4-217ENST00000553145 KRTAP2-3P0C7H8 128 aa7.29□□□□□ -1.24
HDAC4-217ENST00000553145 KRTAP2-4Q9BYR9 128 aa7.29□□□□□ -1.24
HDAC4-217ENST00000553145 A0A1B0GU69 56 aa7.25□□□□□ -1.25
HDAC4-217ENST00000553145 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
HDAC4-217ENST00000553145 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
HDAC4-217ENST00000553145 SPRR2DP22532 72 aa7.2□□□□□ -1.26
HDAC4-217ENST00000553145 ATP5EP56381 51 aaPredicted RBP7.17□□□□□ -1.26
HDAC4-217ENST00000553145 A8MU10 97 aa7.13□□□□□ -1.27
HDAC4-217ENST00000553145 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
HDAC4-217ENST00000553145 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
HDAC4-217ENST00000553145 KRTAP2-2Q9BYT5 123 aa7.06□□□□□ -1.28
HDAC4-217ENST00000553145 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
HDAC4-217ENST00000553145 TMEM258P61165 79 aa7.03□□□□□ -1.28
HDAC4-217ENST00000553145 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
HDAC4-217ENST00000553145 PRR15LQ9BU68 103 aa7.02□□□□□ -1.29
HDAC4-217ENST00000553145 MT1EP04732 61 aa7□□□□□ -1.29
HDAC4-217ENST00000553145 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
HDAC4-217ENST00000553145 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
HDAC4-217ENST00000553145 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
HDAC4-217ENST00000553145 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
HDAC4-217ENST00000553145 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
HDAC4-217ENST00000553145 UQCR11O14957 56 aa6.81□□□□□ -1.32
HDAC4-217ENST00000553145 TNP1P09430 55 aa6.81□□□□□ -1.32
HDAC4-217ENST00000553145 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
HDAC4-217ENST00000553145 DSTQ03001 7570 aaKnown RBP6.77□□□□□ -1.33
HDAC4-217ENST00000553145 MT1GP13640 62 aa6.73□□□□□ -1.33
HDAC4-217ENST00000553145 MT1LQ93083 61 aa6.7□□□□□ -1.34
HDAC4-217ENST00000553145 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
HDAC4-217ENST00000553145 MT1MQ8N339 61 aa6.66□□□□□ -1.34
HDAC4-217ENST00000553145 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms