RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ATXN8Q156A1 80 aa3.02□□□□□ -1.93
PRPF40B-214ENST00000551320 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
PRPF40B-214ENST00000551320 C7orf65Q6ZTY9 151 aa3.02□□□□□ -1.93
PRPF40B-214ENST00000551320 A0A087WVE0 104 aa3.01□□□□□ -1.93
PRPF40B-214ENST00000551320 HCG22E2RYF7 251 aa3.01□□□□□ -1.93
PRPF40B-214ENST00000551320 LCA10Q71F78 164 aa3.01□□□□□ -1.93
PRPF40B-214ENST00000551320 JMJD7-PLA2G4BH0Y9G9 81 aa3□□□□□ -1.93
PRPF40B-214ENST00000551320 KRTAP5-9P26371 169 aa3□□□□□ -1.93
PRPF40B-214ENST00000551320 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
PRPF40B-214ENST00000551320 S4R3F8 94 aa3□□□□□ -1.93
PRPF40B-214ENST00000551320 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
PRPF40B-214ENST00000551320 CASC2Q6XLA1 102 aa2.98□□□□□ -1.93
PRPF40B-214ENST00000551320 C1orf64Q8NEQ6 169 aa2.98□□□□□ -1.93
PRPF40B-214ENST00000551320 BATFQ16520 125 aa2.97□□□□□ -1.93
PRPF40B-214ENST00000551320 IMUPQ9GZP8 106 aa2.97□□□□□ -1.93
PRPF40B-214ENST00000551320 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
PRPF40B-214ENST00000551320 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
PRPF40B-214ENST00000551320 SPRR2EP22531 72 aa2.95□□□□□ -1.94
PRPF40B-214ENST00000551320 SPRR2BP35325 72 aa2.95□□□□□ -1.94
PRPF40B-214ENST00000551320 SPRR2AP35326 72 aa2.95□□□□□ -1.94
PRPF40B-214ENST00000551320 KLKP1Q107X0 134 aa2.95□□□□□ -1.94
PRPF40B-214ENST00000551320 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
PRPF40B-214ENST00000551320 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
PRPF40B-214ENST00000551320 PDE6GP18545 87 aa2.94□□□□□ -1.94
PRPF40B-214ENST00000551320 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
PRPF40B-214ENST00000551320 A0A1B0GW54 56 aa2.93□□□□□ -1.94
PRPF40B-214ENST00000551320 TSTD3H0UI37 97 aa2.92□□□□□ -1.94
PRPF40B-214ENST00000551320 K7EP34 96 aa2.92□□□□□ -1.94
PRPF40B-214ENST00000551320 M0R143 59 aa2.91□□□□□ -1.94
PRPF40B-214ENST00000551320 CXCL6P80162 114 aa2.91□□□□□ -1.94
PRPF40B-214ENST00000551320 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
PRPF40B-214ENST00000551320 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
PRPF40B-214ENST00000551320 MT1XP80297 61 aa2.89□□□□□ -1.95
PRPF40B-214ENST00000551320 A0A1W2PPM0 123 aa2.87□□□□□ -1.95
PRPF40B-214ENST00000551320 H3BT86 120 aa2.87□□□□□ -1.95
PRPF40B-214ENST00000551320 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
PRPF40B-214ENST00000551320 SPRR2DP22532 72 aa2.84□□□□□ -1.95
PRPF40B-214ENST00000551320 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
PRPF40B-214ENST00000551320 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
PRPF40B-214ENST00000551320 CYP4F30PQ9H0H9 118 aa2.84□□□□□ -1.95
PRPF40B-214ENST00000551320 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
PRPF40B-214ENST00000551320 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
PRPF40B-214ENST00000551320 UBL5Q9BZL1 73 aa2.81□□□□□ -1.96
PRPF40B-214ENST00000551320 PRO0461Q9UI25 63 aa2.81□□□□□ -1.96
PRPF40B-214ENST00000551320 A8MUN3 132 aa2.8□□□□□ -1.96
PRPF40B-214ENST00000551320 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
PRPF40B-214ENST00000551320 P0C880 135 aa2.79□□□□□ -1.96
PRPF40B-214ENST00000551320 A8MU10 97 aa2.78□□□□□ -1.96
PRPF40B-214ENST00000551320 NDUFC1O43677 76 aa2.78□□□□□ -1.96
PRPF40B-214ENST00000551320 SMIM6P0DI80 62 aa2.78□□□□□ -1.96
PRPF40B-214ENST00000551320 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
PRPF40B-214ENST00000551320 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
PRPF40B-214ENST00000551320 TP53AIP1Q9HCN2 124 aa2.77□□□□□ -1.97
PRPF40B-214ENST00000551320 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
PRPF40B-214ENST00000551320 TRAV22A0A0B4J277 110 aa2.75□□□□□ -1.97
PRPF40B-214ENST00000551320 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
PRPF40B-214ENST00000551320 H0Y9P7 68 aa2.74□□□□□ -1.97
PRPF40B-214ENST00000551320 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
PRPF40B-214ENST00000551320 LOC101927531A0A1B0GV80 90 aa2.73□□□□□ -1.97
PRPF40B-214ENST00000551320 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
PRPF40B-214ENST00000551320 H0YAA0 97 aa2.73□□□□□ -1.97
PRPF40B-214ENST00000551320 M0QZ58 72 aa2.73□□□□□ -1.97
PRPF40B-214ENST00000551320 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
PRPF40B-214ENST00000551320 LOC105371267A0A1B0GV96 52 aa2.72□□□□□ -1.97
PRPF40B-214ENST00000551320 R4GN34 69 aa2.72□□□□□ -1.97
PRPF40B-214ENST00000551320 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
PRPF40B-214ENST00000551320 ACYP1P07311 99 aa2.7□□□□□ -1.98
PRPF40B-214ENST00000551320 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
PRPF40B-214ENST00000551320 HIST1H4AP62805 103 aaKnown RBP2.69□□□□□ -1.98
PRPF40B-214ENST00000551320 LINC00208Q96KT6 92 aa2.69□□□□□ -1.98
PRPF40B-214ENST00000551320 COL5A1-AS1Q5SY13 56 aa2.67□□□□□ -1.98
PRPF40B-214ENST00000551320 UQCRQO14949 82 aa2.66□□□□□ -1.98
PRPF40B-214ENST00000551320 PCP4L1A6NKN8 68 aa2.62□□□□□ -1.99
PRPF40B-214ENST00000551320 F8W1H4 67 aa2.62□□□□□ -1.99
PRPF40B-214ENST00000551320 ATOX1O00244 68 aa2.62□□□□□ -1.99
PRPF40B-214ENST00000551320 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
PRPF40B-214ENST00000551320 GTF2H5Q6ZYL4 71 aa2.61□□□□□ -1.99
PRPF40B-214ENST00000551320 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
PRPF40B-214ENST00000551320 MT-ATP8P03928 68 aa2.59□□□□□ -1.99
PRPF40B-214ENST00000551320 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
PRPF40B-214ENST00000551320 C20orf197Q8N268 126 aa2.58□□□□□ -2
PRPF40B-214ENST00000551320 MP68P56378 58 aa2.57□□□□□ -2
PRPF40B-214ENST00000551320 DMAC1Q96GE9 116 aa2.57□□□□□ -2
PRPF40B-214ENST00000551320 MT4P47944 62 aa2.56□□□□□ -2
PRPF40B-214ENST00000551320 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
PRPF40B-214ENST00000551320 MT1EP04732 61 aa2.55□□□□□ -2
PRPF40B-214ENST00000551320 ATP5EP2Q5VTU8 51 aa2.55□□□□□ -2
PRPF40B-214ENST00000551320 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
PRPF40B-214ENST00000551320 FAM240AA0A1B0GVK7 77 aa2.52□□□□□ -2.01
PRPF40B-214ENST00000551320 LINC00643Q86TS7 51 aa2.52□□□□□ -2.01
PRPF40B-214ENST00000551320 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
PRPF40B-214ENST00000551320 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
PRPF40B-214ENST00000551320 CYSTM1Q9H1C7 97 aa2.5□□□□□ -2.01
PRPF40B-214ENST00000551320 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
PRPF40B-214ENST00000551320 A0A0D9SG42 100 aa2.47□□□□□ -2.01
PRPF40B-214ENST00000551320 SCGB1A1P11684 91 aa2.47□□□□□ -2.01
PRPF40B-214ENST00000551320 TRAV7A0A075B6U4 112 aa2.46□□□□□ -2.02
PRPF40B-214ENST00000551320 CHKB-CPT1BH3BT56 60 aa2.45□□□□□ -2.02
PRPF40B-214ENST00000551320 ACYP2P14621 99 aa2.45□□□□□ -2.02
PRPF40B-214ENST00000551320 MT1MQ8N339 61 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms