RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TRGV2A0A075B6R0 118 aa2.34□□□□□ -2.03
CPSF6-206ENST00000550987 SPRR2EP22531 72 aa2.34□□□□□ -2.03
CPSF6-206ENST00000550987 SPRR2BP35325 72 aa2.34□□□□□ -2.03
CPSF6-206ENST00000550987 SPRR2AP35326 72 aa2.34□□□□□ -2.03
CPSF6-206ENST00000550987 ATXN8Q156A1 80 aa2.34□□□□□ -2.03
CPSF6-206ENST00000550987 FXYD6-FXYD2A0A087WZ82 144 aa2.33□□□□□ -2.04
CPSF6-206ENST00000550987 F8VRH5 84 aa2.33□□□□□ -2.04
CPSF6-206ENST00000550987 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
CPSF6-206ENST00000550987 FXYD6Q9H0Q3 95 aa2.33□□□□□ -2.04
CPSF6-206ENST00000550987 PRO0255Q9UI72 69 aa2.33□□□□□ -2.04
CPSF6-206ENST00000550987 TRGV1A0A0A0MS02 117 aa2.32□□□□□ -2.04
CPSF6-206ENST00000550987 TRAV1-2A0A0B4J238 106 aa2.32□□□□□ -2.04
CPSF6-206ENST00000550987 H3BVH4 76 aa2.32□□□□□ -2.04
CPSF6-206ENST00000550987 UQCR11O14957 56 aa2.32□□□□□ -2.04
CPSF6-206ENST00000550987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.32□□□□□ -2.04
CPSF6-206ENST00000550987 PRR15LQ9BU68 103 aa2.32□□□□□ -2.04
CPSF6-206ENST00000550987 TRBV6-5A0A0K0K1A5 114 aa2.31□□□□□ -2.04
CPSF6-206ENST00000550987 MGPP08493 103 aa2.31□□□□□ -2.04
CPSF6-206ENST00000550987 LINC01556Q5JQF7 62 aa2.31□□□□□ -2.04
CPSF6-206ENST00000550987 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
CPSF6-206ENST00000550987 COA5Q86WW8 74 aa2.31□□□□□ -2.04
CPSF6-206ENST00000550987 TMEM14CQ9P0S9 112 aa2.31□□□□□ -2.04
CPSF6-206ENST00000550987 M0R2T5 61 aa2.3□□□□□ -2.04
CPSF6-206ENST00000550987 SPINK4O60575 86 aa2.3□□□□□ -2.04
CPSF6-206ENST00000550987 NDUFB1O75438 58 aa2.3□□□□□ -2.04
CPSF6-206ENST00000550987 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
CPSF6-206ENST00000550987 LINC01558Q9Y6Z2 57 aa2.3□□□□□ -2.04
CPSF6-206ENST00000550987 V9GYV3 84 aa2.3□□□□□ -2.04
CPSF6-206ENST00000550987 IGKV2-40A0A087WW87 121 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-206ENST00000550987 TRBV7-4A0A0J9YYF1 115 aa2.29□□□□□ -2.04
CPSF6-206ENST00000550987 IGKV2D-40P01614 121 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-206ENST00000550987 COX17Q14061 63 aa2.29□□□□□ -2.04
CPSF6-206ENST00000550987 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
CPSF6-206ENST00000550987 IGKV3D-7A0A0C4DH55 119 aa2.28□□□□□ -2.04
CPSF6-206ENST00000550987 IGKV3OR2-268A0A0C4DH90 116 aa2.28□□□□□ -2.04
CPSF6-206ENST00000550987 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
CPSF6-206ENST00000550987 SPRR2DP22532 72 aa2.28□□□□□ -2.04
CPSF6-206ENST00000550987 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.04
CPSF6-206ENST00000550987 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.04
CPSF6-206ENST00000550987 CTXND1A0A1B0GTU2 59 aa2.27□□□□□ -2.05
CPSF6-206ENST00000550987 SMIM4Q8WVI0 70 aa2.27□□□□□ -2.05
CPSF6-206ENST00000550987 INE1O15225 51 aa2.26□□□□□ -2.05
CPSF6-206ENST00000550987 RNASE3P12724 160 aaKnown RBP2.26□□□□□ -2.05
CPSF6-206ENST00000550987 A0A087WVE0 104 aa2.24□□□□□ -2.05
CPSF6-206ENST00000550987 LOC110117498A0A087WWA1 95 aa2.24□□□□□ -2.05
CPSF6-206ENST00000550987 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
CPSF6-206ENST00000550987 H0Y9P7 68 aa2.23□□□□□ -2.05
CPSF6-206ENST00000550987 M0R3E3 92 aa2.23□□□□□ -2.05
CPSF6-206ENST00000550987 IAPPP10997 89 aa2.23□□□□□ -2.05
CPSF6-206ENST00000550987 SPINK6Q6UWN8 80 aa2.23□□□□□ -2.05
CPSF6-206ENST00000550987 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-206ENST00000550987 ZNF625Q96I27 306 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-206ENST00000550987 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CPSF6-206ENST00000550987 PLAC8Q9NZF1 115 aa2.23□□□□□ -2.05
CPSF6-206ENST00000550987 TRBV30A0A0K0K1B3 111 aa2.22□□□□□ -2.05
CPSF6-206ENST00000550987 IGKV2-29A2NJV5 120 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-206ENST00000550987 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
CPSF6-206ENST00000550987 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
CPSF6-206ENST00000550987 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
CPSF6-206ENST00000550987 TOMM5Q8N4H5 51 aa2.22□□□□□ -2.05
CPSF6-206ENST00000550987 SPRR4Q96PI1 79 aa2.22□□□□□ -2.05
CPSF6-206ENST00000550987 LINC01549A6NIU2 74 aa2.21□□□□□ -2.06
CPSF6-206ENST00000550987 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
CPSF6-206ENST00000550987 ENHOQ6UWT2 76 aa2.21□□□□□ -2.06
CPSF6-206ENST00000550987 LINC00208Q96KT6 92 aa2.2□□□□□ -2.06
CPSF6-206ENST00000550987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.19□□□□□ -2.06
CPSF6-206ENST00000550987 NREPQ16612 68 aa2.19□□□□□ -2.06
CPSF6-206ENST00000550987 C10orf113Q5VZT2 155 aa2.19□□□□□ -2.06
CPSF6-206ENST00000550987 SPATA8Q6RVD6 105 aa2.19□□□□□ -2.06
CPSF6-206ENST00000550987 COX6A2Q02221 97 aa2.18□□□□□ -2.06
CPSF6-206ENST00000550987 NMES1Q9C002 83 aa2.18□□□□□ -2.06
CPSF6-206ENST00000550987 TRBV6-1A0A0K0K1D8 114 aa2.17□□□□□ -2.06
CPSF6-206ENST00000550987 ANGP03950 147 aaKnown RBP2.17□□□□□ -2.06
CPSF6-206ENST00000550987 TRAV21A0A0B4J279 112 aa2.16□□□□□ -2.06
CPSF6-206ENST00000550987 ACYP2P14621 99 aa2.16□□□□□ -2.06
CPSF6-206ENST00000550987 Q6ZQY7 126 aa2.16□□□□□ -2.06
CPSF6-206ENST00000550987 UBL5Q9BZL1 73 aa2.16□□□□□ -2.06
CPSF6-206ENST00000550987 CLPSL2Q6UWE3 100 aa2.15□□□□□ -2.07
CPSF6-206ENST00000550987 Q96NJ1 140 aa2.15□□□□□ -2.07
CPSF6-206ENST00000550987 A0A096LNI7 61 aa2.14□□□□□ -2.07
CPSF6-206ENST00000550987 SERF2P84101 59 aa2.14□□□□□ -2.07
CPSF6-206ENST00000550987 SPINK7P58062 85 aa2.13□□□□□ -2.07
CPSF6-206ENST00000550987 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
CPSF6-206ENST00000550987 NCR3O14931 201 aa2.12□□□□□ -2.07
CPSF6-206ENST00000550987 FCER1GP30273 86 aa2.12□□□□□ -2.07
CPSF6-206ENST00000550987 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
CPSF6-206ENST00000550987 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
CPSF6-206ENST00000550987 LINC00472Q9H8W2 130 aa2.12□□□□□ -2.07
CPSF6-206ENST00000550987 OBSCN-AS1Q96MR7 158 aa2.11□□□□□ -2.07
CPSF6-206ENST00000550987 PLNP26678 52 aa2.1□□□□□ -2.07
CPSF6-206ENST00000550987 SMIM11BQ8TCY0 68 aa2.1□□□□□ -2.07
CPSF6-206ENST00000550987 GVQW2A0A096LPI5 108 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-206ENST00000550987 A0A1B0GU69 56 aa2.09□□□□□ -2.07
CPSF6-206ENST00000550987 MT4P47944 62 aa2.09□□□□□ -2.07
CPSF6-206ENST00000550987 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.08
CPSF6-206ENST00000550987 K7EMI3 77 aa2.08□□□□□ -2.08
CPSF6-206ENST00000550987 CRIP1P50238 77 aa2.08□□□□□ -2.08
CPSF6-206ENST00000550987 LINC00575Q6W349 94 aa2.06□□□□□ -2.08
CPSF6-206ENST00000550987 PLAC4Q8WY50 150 aa2.06□□□□□ -2.08
CPSF6-206ENST00000550987 M0QY20 66 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms