RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 A6NN06 94 aa8.96□□□□□ -0.98
GCN1-207ENST00000550471 HIST1H4AP62805 103 aaKnown RBP8.94□□□□□ -0.98
GCN1-207ENST00000550471 KRTAP3-3Q9BYR6 98 aa8.93□□□□□ -0.98
GCN1-207ENST00000550471 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
GCN1-207ENST00000550471 MT1BP07438 61 aa8.92□□□□□ -0.98
GCN1-207ENST00000550471 A8MUN3 132 aa8.88□□□□□ -0.99
GCN1-207ENST00000550471 H0Y9P7 68 aa8.88□□□□□ -0.99
GCN1-207ENST00000550471 NDUFC1O43677 76 aa8.88□□□□□ -0.99
GCN1-207ENST00000550471 H0YAA0 97 aa8.86□□□□□ -0.99
GCN1-207ENST00000550471 LINC00643Q86TS7 51 aa8.85□□□□□ -0.99
GCN1-207ENST00000550471 KRTAP10-5P60370 271 aa8.81□□□□□ -1
GCN1-207ENST00000550471 A0A087WVE0 104 aa8.77□□□□□ -1.01
GCN1-207ENST00000550471 MP68P56378 58 aa8.77□□□□□ -1.01
GCN1-207ENST00000550471 LINC00208Q96KT6 92 aa8.73□□□□□ -1.01
GCN1-207ENST00000550471 H3BPC8 53 aa8.67□□□□□ -1.02
GCN1-207ENST00000550471 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
GCN1-207ENST00000550471 NEBP20929 6669 aa8.66□□□□□ -1.02
GCN1-207ENST00000550471 J3QR89 54 aa8.63□□□□□ -1.03
GCN1-207ENST00000550471 ADM2Q7Z4H4 148 aa8.63□□□□□ -1.03
GCN1-207ENST00000550471 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
GCN1-207ENST00000550471 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
GCN1-207ENST00000550471 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
GCN1-207ENST00000550471 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
GCN1-207ENST00000550471 PLAC4Q8WY50 150 aa8.52□□□□□ -1.05
GCN1-207ENST00000550471 R4GN34 69 aa8.51□□□□□ -1.05
GCN1-207ENST00000550471 A0A1B0GV90 55 aa8.5□□□□□ -1.05
GCN1-207ENST00000550471 DMAC1Q96GE9 116 aa8.5□□□□□ -1.05
GCN1-207ENST00000550471 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
GCN1-207ENST00000550471 TRAV7A0A075B6U4 112 aa8.4□□□□□ -1.06
GCN1-207ENST00000550471 M0QZ58 72 aa8.38□□□□□ -1.07
GCN1-207ENST00000550471 P0C880 135 aa8.36□□□□□ -1.07
GCN1-207ENST00000550471 KRTAP20-1Q3LI63 56 aa8.36□□□□□ -1.07
GCN1-207ENST00000550471 MT1XP80297 61 aa8.35□□□□□ -1.07
GCN1-207ENST00000550471 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
GCN1-207ENST00000550471 SPTSSBQ8NFR3 76 aa8.35□□□□□ -1.07
GCN1-207ENST00000550471 ACYP2P14621 99 aa8.34□□□□□ -1.07
GCN1-207ENST00000550471 KMT2DO14686 5537 aa8.31□□□□□ -1.08
GCN1-207ENST00000550471 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
GCN1-207ENST00000550471 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
GCN1-207ENST00000550471 SPRR2FQ96RM1 72 aa8.23□□□□□ -1.09
GCN1-207ENST00000550471 MDN1Q9NU22 5596 aa8.22□□□□□ -1.09
GCN1-207ENST00000550471 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
GCN1-207ENST00000550471 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.1
GCN1-207ENST00000550471 K7ERU9 68 aa8.2□□□□□ -1.1
GCN1-207ENST00000550471 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
GCN1-207ENST00000550471 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
GCN1-207ENST00000550471 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
GCN1-207ENST00000550471 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
GCN1-207ENST00000550471 SPRR2EP22531 72 aa8.14□□□□□ -1.11
GCN1-207ENST00000550471 SPRR2BP35325 72 aa8.14□□□□□ -1.11
GCN1-207ENST00000550471 SPRR2AP35326 72 aa8.14□□□□□ -1.11
GCN1-207ENST00000550471 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
GCN1-207ENST00000550471 LCE1AQ5T7P2 110 aa8□□□□□ -1.13
GCN1-207ENST00000550471 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
GCN1-207ENST00000550471 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
GCN1-207ENST00000550471 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
GCN1-207ENST00000550471 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
GCN1-207ENST00000550471 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
GCN1-207ENST00000550471 SERP2Q8N6R1 65 aa7.93□□□□□ -1.14
GCN1-207ENST00000550471 KRTAP2-2Q9BYT5 123 aa7.9□□□□□ -1.14
GCN1-207ENST00000550471 KRTAP2-1Q9BYU5 128 aa7.9□□□□□ -1.14
GCN1-207ENST00000550471 SPRR2DP22532 72 aa7.88□□□□□ -1.15
GCN1-207ENST00000550471 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
GCN1-207ENST00000550471 SEC61GP60059 68 aa7.8□□□□□ -1.16
GCN1-207ENST00000550471 SERP1Q9Y6X1 66 aa7.76□□□□□ -1.17
GCN1-207ENST00000550471 COA5Q86WW8 74 aa7.74□□□□□ -1.17
GCN1-207ENST00000550471 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
GCN1-207ENST00000550471 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
GCN1-207ENST00000550471 COX7CP15954 63 aa7.63□□□□□ -1.19
GCN1-207ENST00000550471 A0A1B0GU33 70 aa7.57□□□□□ -1.2
GCN1-207ENST00000550471 A0A0D9SG42 100 aa7.54□□□□□ -1.2
GCN1-207ENST00000550471 H7BZZ5 65 aa7.51□□□□□ -1.21
GCN1-207ENST00000550471 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
GCN1-207ENST00000550471 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
GCN1-207ENST00000550471 KRTAP19-7Q3SYF9 63 aa7.46□□□□□ -1.22
GCN1-207ENST00000550471 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
GCN1-207ENST00000550471 LCE5AQ5TCM9 118 aa7.44□□□□□ -1.22
GCN1-207ENST00000550471 MT1EP04732 61 aa7.43□□□□□ -1.22
GCN1-207ENST00000550471 A0A1B0GU69 56 aa7.42□□□□□ -1.22
GCN1-207ENST00000550471 KRTAP19-3Q7Z4W3 81 aa7.42□□□□□ -1.22
GCN1-207ENST00000550471 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
GCN1-207ENST00000550471 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
GCN1-207ENST00000550471 MT1GP13640 62 aa7.29□□□□□ -1.24
GCN1-207ENST00000550471 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
GCN1-207ENST00000550471 ANAPC13Q9BS18 74 aa7.29□□□□□ -1.24
GCN1-207ENST00000550471 DSTQ03001 7570 aaKnown RBP7.28□□□□□ -1.24
GCN1-207ENST00000550471 GPR98Q8WXG9 6306 aa7.26□□□□□ -1.25
GCN1-207ENST00000550471 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
GCN1-207ENST00000550471 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
GCN1-207ENST00000550471 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
GCN1-207ENST00000550471 TNP1P09430 55 aa7.2□□□□□ -1.26
GCN1-207ENST00000550471 A8MU10 97 aa7.16□□□□□ -1.26
GCN1-207ENST00000550471 MT1LQ93083 61 aa7.08□□□□□ -1.28
GCN1-207ENST00000550471 MT1MQ8N339 61 aa7.07□□□□□ -1.28
GCN1-207ENST00000550471 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
GCN1-207ENST00000550471 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
GCN1-207ENST00000550471 CCDC179H3BU77 68 aa7.05□□□□□ -1.28
GCN1-207ENST00000550471 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
GCN1-207ENST00000550471 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
GCN1-207ENST00000550471 LCE4AQ5TA78 99 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms