RNA–Protein interactions for RNA: ENST00000549872.5

CHPT1-205, Transcript of choline phosphotransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHPT1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-205ENST00000549872 KRTAP4-1Q9BYQ7 146 aa13.52□□□□□ -0.25
CHPT1-205ENST00000549872 SEC61GP60059 68 aa13.51□□□□□ -0.25
CHPT1-205ENST00000549872 MUC17Q685J3 4493 aa13.49□□□□□ -0.25
CHPT1-205ENST00000549872 PRR15LQ9BU68 103 aa13.47□□□□□ -0.25
CHPT1-205ENST00000549872 RBM12B-AS1Q9P1G2 102 aa13.42□□□□□ -0.26
CHPT1-205ENST00000549872 LINC01558Q9Y6Z2 57 aa13.35□□□□□ -0.27
CHPT1-205ENST00000549872 H1FX-AS1Q4G0G2 97 aa13.33□□□□□ -0.28
CHPT1-205ENST00000549872 A6NED7 52 aa13.3□□□□□ -0.28
CHPT1-205ENST00000549872 CDC42SE1Q9NRR8 79 aa13.29□□□□□ -0.28
CHPT1-205ENST00000549872 LCA10Q71F78 164 aa13.28□□□□□ -0.28
CHPT1-205ENST00000549872 SPTSSBQ8NFR3 76 aa13.28□□□□□ -0.28
CHPT1-205ENST00000549872 S4R3F8 94 aa13.27□□□□□ -0.29
CHPT1-205ENST00000549872 A8MU10 97 aa13.26□□□□□ -0.29
CHPT1-205ENST00000549872 KTN1-AS1Q86SY8 53 aa13.25□□□□□ -0.29
CHPT1-205ENST00000549872 MUC2Q02817 5179 aa13.24□□□□□ -0.29
CHPT1-205ENST00000549872 KRTAP3-3Q9BYR6 98 aa13.23□□□□□ -0.29
CHPT1-205ENST00000549872 A6NN06 94 aa13.14□□□□□ -0.31
CHPT1-205ENST00000549872 KRTAP19-2Q3LHN2 52 aa13.12□□□□□ -0.31
CHPT1-205ENST00000549872 A0A1B0GU69 56 aa13.12□□□□□ -0.31
CHPT1-205ENST00000549872 UBR4Q5T4S7 5183 aa13.09□□□□□ -0.31
CHPT1-205ENST00000549872 RNF213Q63HN8 5207 aa12.98□□□□□ -0.33
CHPT1-205ENST00000549872 CSAG1Q6PB30 78 aa12.94□□□□□ -0.34
CHPT1-205ENST00000549872 LCE2CQ5TA81 110 aa12.79□□□□□ -0.36
CHPT1-205ENST00000549872 KRTAP3-2Q9BYR7 98 aa12.78□□□□□ -0.36
CHPT1-205ENST00000549872 FLGP20930 4061 aaPredicted RBP12.78□□□□□ -0.36
CHPT1-205ENST00000549872 KRTAP10-6P60371 365 aaPredicted RBP12.76□□□□□ -0.37
CHPT1-205ENST00000549872 ADM2Q7Z4H4 148 aa12.72□□□□□ -0.37
CHPT1-205ENST00000549872 UQCR11O14957 56 aa12.71□□□□□ -0.38
CHPT1-205ENST00000549872 A0A1B0GU33 70 aa12.7□□□□□ -0.38
CHPT1-205ENST00000549872 P0C880 135 aa12.69□□□□□ -0.38
CHPT1-205ENST00000549872 SPATA8Q6RVD6 105 aa12.69□□□□□ -0.38
CHPT1-205ENST00000549872 FAT4Q6V0I7 4981 aa12.69□□□□□ -0.38
CHPT1-205ENST00000549872 H0YAA0 97 aa12.61□□□□□ -0.39
CHPT1-205ENST00000549872 MIR22HGQ0VDD5 57 aa12.6□□□□□ -0.39
CHPT1-205ENST00000549872 MT1HP80294 61 aa12.52□□□□□ -0.4
CHPT1-205ENST00000549872 KRTAP13-4Q3LI77 160 aa12.47□□□□□ -0.41
CHPT1-205ENST00000549872 M0R2T5 61 aa12.43□□□□□ -0.42
CHPT1-205ENST00000549872 PRAC1Q96KF2 57 aa12.38□□□□□ -0.43
CHPT1-205ENST00000549872 LORP23490 312 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-205ENST00000549872 LINC01554Q52M75 96 aa12.29□□□□□ -0.44
CHPT1-205ENST00000549872 M0QZ58 72 aa12.27□□□□□ -0.45
CHPT1-205ENST00000549872 A0A0D9SG42 100 aa12.25□□□□□ -0.45
CHPT1-205ENST00000549872 R4GN34 69 aa12.23□□□□□ -0.45
CHPT1-205ENST00000549872 KRTAP9-8Q9BYQ0 159 aa12.08□□□□□ -0.48
CHPT1-205ENST00000549872 MT2AP02795 61 aa12.05□□□□□ -0.48
CHPT1-205ENST00000549872 CRIPTQ9P021 101 aa12.02□□□□□ -0.49
CHPT1-205ENST00000549872 MT1FP04733 61 aa12□□□□□ -0.49
CHPT1-205ENST00000549872 KRTAP12-2P59991 146 aa11.96□□□□□ -0.49
CHPT1-205ENST00000549872 KRTAP10-10P60014 251 aa11.96□□□□□ -0.49
CHPT1-205ENST00000549872 K7ERS5 55 aa11.96□□□□□ -0.5
CHPT1-205ENST00000549872 KRTAP12-1P59990 96 aa11.96□□□□□ -0.5
CHPT1-205ENST00000549872 LCE2AQ5TA79 106 aaPredicted RBP11.94□□□□□ -0.5
CHPT1-205ENST00000549872 SPINT4Q6UDR6 99 aa11.94□□□□□ -0.5
CHPT1-205ENST00000549872 KRTAP25-1Q3LHN0 102 aa11.81□□□□□ -0.52
CHPT1-205ENST00000549872 KRTAP19-1Q8IUB9 90 aa11.81□□□□□ -0.52
CHPT1-205ENST00000549872 SPRR2GQ9BYE4 73 aa11.81□□□□□ -0.52
CHPT1-205ENST00000549872 KRTAP9-3Q9BYQ3 159 aa11.63□□□□□ -0.55
CHPT1-205ENST00000549872 ROMO1P60602 79 aa11.52□□□□□ -0.57
CHPT1-205ENST00000549872 H3BS24 57 aa11.5□□□□□ -0.57
CHPT1-205ENST00000549872 CAMK2N1Q7Z7J9 78 aa11.48□□□□□ -0.57
CHPT1-205ENST00000549872 KRTAP19-8Q3LI54 63 aa11.48□□□□□ -0.57
CHPT1-205ENST00000549872 PLAC4Q8WY50 150 aa11.45□□□□□ -0.58
CHPT1-205ENST00000549872 MT1BP07438 61 aa11.37□□□□□ -0.59
CHPT1-205ENST00000549872 C10orf95Q9H7T3 257 aa11.33□□□□□ -0.6
CHPT1-205ENST00000549872 LCE2BO14633 110 aa11.32□□□□□ -0.6
CHPT1-205ENST00000549872 USH2AO75445 5202 aa11.04□□□□□ -0.64
CHPT1-205ENST00000549872 MT1XP80297 61 aa11.02□□□□□ -0.64
CHPT1-205ENST00000549872 KRTAP10-5P60370 271 aa11.01□□□□□ -0.65
CHPT1-205ENST00000549872 TNP1P09430 55 aa10.91□□□□□ -0.66
CHPT1-205ENST00000549872 KRTAP15-1Q3LI76 137 aa10.82□□□□□ -0.68
CHPT1-205ENST00000549872 PRO2289Q9P1D8 64 aa10.82□□□□□ -0.68
CHPT1-205ENST00000549872 LCE2DQ5TA82 110 aaPredicted RBP10.77□□□□□ -0.69
CHPT1-205ENST00000549872 SSPOA2VEC9 5147 aa10.68□□□□□ -0.7
CHPT1-205ENST00000549872 FSIP2Q5CZC0 6907 aa10.65□□□□□ -0.7
CHPT1-205ENST00000549872 KRTAP10-7P60409 375 aaPredicted RBP10.62□□□□□ -0.71
CHPT1-205ENST00000549872 PP632Q6XCG6 107 aa10.58□□□□□ -0.72
CHPT1-205ENST00000549872 NDUFAF8A1L188 74 aa10.57□□□□□ -0.72
CHPT1-205ENST00000549872 KRTAP19-6Q3LI70 58 aa10.54□□□□□ -0.72
CHPT1-205ENST00000549872 KRTAP23-1A1A580 65 aa10.52□□□□□ -0.73
CHPT1-205ENST00000549872 LCE3AQ5TA76 89 aa10.49□□□□□ -0.73
CHPT1-205ENST00000549872 KRTAP10-12P60413 245 aa10.47□□□□□ -0.73
CHPT1-205ENST00000549872 KRTAP9-2Q9BYQ4 174 aa10.36□□□□□ -0.75
CHPT1-205ENST00000549872 KMT2DO14686 5537 aa10.24□□□□□ -0.77
CHPT1-205ENST00000549872 KRTAP8-1Q8IUC2 63 aa10.22□□□□□ -0.77
CHPT1-205ENST00000549872 KRTAP4-8A0A0G2JLE6 195 aa10.21□□□□□ -0.78
CHPT1-205ENST00000549872 KRTAP4-8Q9BYQ9 185 aa10.21□□□□□ -0.78
CHPT1-205ENST00000549872 FCGBPQ9Y6R7 5405 aaPredicted RBP10.2□□□□□ -0.78
CHPT1-205ENST00000549872 KRTAP12-3P60328 96 aa10.04□□□□□ -0.8
CHPT1-205ENST00000549872 KRTAP19-5Q3LI72 72 aa10□□□□□ -0.81
CHPT1-205ENST00000549872 CRCT1Q9UGL9 99 aa10□□□□□ -0.81
CHPT1-205ENST00000549872 LUZP6Q538Z0 58 aa9.89□□□□□ -0.83
CHPT1-205ENST00000549872 KRTAP19-7Q3SYF9 63 aa9.83□□□□□ -0.84
CHPT1-205ENST00000549872 MACF1Q9UPN3 7388 aaKnown RBP9.73□□□□□ -0.85
CHPT1-205ENST00000549872 A0A0A0MQY5 61 aa9.64□□□□□ -0.87
CHPT1-205ENST00000549872 MT1EP04732 61 aa9.64□□□□□ -0.87
CHPT1-205ENST00000549872 SPRR5A0A1B0GTR4 108 aa9.55□□□□□ -0.88
CHPT1-205ENST00000549872 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
CHPT1-205ENST00000549872 MT1LQ93083 61 aa9.46□□□□□ -0.89
CHPT1-205ENST00000549872 SYNE2Q8WXH0 6885 aaKnown RBP9.45□□□□□ -0.9
CHPT1-205ENST00000549872 SPRR2FQ96RM1 72 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms