RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 PRO0461Q9UI25 63 aa4.36□□□□□ -1.71
GCN1-205ENST00000548821 TRAV22A0A0B4J277 110 aa4.35□□□□□ -1.71
GCN1-205ENST00000548821 ATOX1O00244 68 aa4.35□□□□□ -1.71
GCN1-205ENST00000548821 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
GCN1-205ENST00000548821 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
GCN1-205ENST00000548821 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
GCN1-205ENST00000548821 NDUFC1O43677 76 aa4.33□□□□□ -1.72
GCN1-205ENST00000548821 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
GCN1-205ENST00000548821 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
GCN1-205ENST00000548821 UQCRQO14949 82 aa4.31□□□□□ -1.72
GCN1-205ENST00000548821 ETDBQ3ZM63 59 aa4.31□□□□□ -1.72
GCN1-205ENST00000548821 A8MUN3 132 aa4.3□□□□□ -1.72
GCN1-205ENST00000548821 H0YAA0 97 aa4.28□□□□□ -1.72
GCN1-205ENST00000548821 MT1BP07438 61 aa4.27□□□□□ -1.73
GCN1-205ENST00000548821 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
GCN1-205ENST00000548821 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
GCN1-205ENST00000548821 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
GCN1-205ENST00000548821 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
GCN1-205ENST00000548821 H0Y9P7 68 aa4.25□□□□□ -1.73
GCN1-205ENST00000548821 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
GCN1-205ENST00000548821 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
GCN1-205ENST00000548821 MP68P56378 58 aa4.23□□□□□ -1.73
GCN1-205ENST00000548821 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
GCN1-205ENST00000548821 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
GCN1-205ENST00000548821 NEBP20929 6669 aa4.2□□□□□ -1.74
GCN1-205ENST00000548821 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
GCN1-205ENST00000548821 PCP4L1A6NKN8 68 aa4.18□□□□□ -1.74
GCN1-205ENST00000548821 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
GCN1-205ENST00000548821 LINC00208Q96KT6 92 aa4.18□□□□□ -1.74
GCN1-205ENST00000548821 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
GCN1-205ENST00000548821 H3BPC8 53 aa4.16□□□□□ -1.74
GCN1-205ENST00000548821 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
GCN1-205ENST00000548821 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
GCN1-205ENST00000548821 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
GCN1-205ENST00000548821 R4GN34 69 aa4.16□□□□□ -1.74
GCN1-205ENST00000548821 A0A087WVE0 104 aa4.15□□□□□ -1.75
GCN1-205ENST00000548821 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
GCN1-205ENST00000548821 J3QR89 54 aa4.12□□□□□ -1.75
GCN1-205ENST00000548821 SCGB1A1P11684 91 aa4.11□□□□□ -1.75
GCN1-205ENST00000548821 SPTSSBQ8NFR3 76 aa4.08□□□□□ -1.76
GCN1-205ENST00000548821 OCR1Q9BZK8 76 aa4.08□□□□□ -1.76
GCN1-205ENST00000548821 M0QZ58 72 aa4.06□□□□□ -1.76
GCN1-205ENST00000548821 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
GCN1-205ENST00000548821 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
GCN1-205ENST00000548821 KMT2DO14686 5537 aa4.06□□□□□ -1.76
GCN1-205ENST00000548821 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
GCN1-205ENST00000548821 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
GCN1-205ENST00000548821 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
GCN1-205ENST00000548821 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
GCN1-205ENST00000548821 ACYP2P14621 99 aa4.03□□□□□ -1.76
GCN1-205ENST00000548821 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
GCN1-205ENST00000548821 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
GCN1-205ENST00000548821 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
GCN1-205ENST00000548821 SPRR2EP22531 72 aa4.01□□□□□ -1.77
GCN1-205ENST00000548821 SPRR2BP35325 72 aa4.01□□□□□ -1.77
GCN1-205ENST00000548821 SPRR2AP35326 72 aa4.01□□□□□ -1.77
GCN1-205ENST00000548821 MT1XP80297 61 aa4□□□□□ -1.77
GCN1-205ENST00000548821 LINC01554Q52M75 96 aa4□□□□□ -1.77
GCN1-205ENST00000548821 SMIM20Q8N5G0 67 aa4□□□□□ -1.77
GCN1-205ENST00000548821 MT-ATP8P03928 68 aa3.99□□□□□ -1.77
GCN1-205ENST00000548821 P0C880 135 aa3.99□□□□□ -1.77
GCN1-205ENST00000548821 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
GCN1-205ENST00000548821 CHKB-CPT1BH3BT56 60 aa3.96□□□□□ -1.78
GCN1-205ENST00000548821 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
GCN1-205ENST00000548821 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
GCN1-205ENST00000548821 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
GCN1-205ENST00000548821 PCP4P48539 62 aa3.91□□□□□ -1.78
GCN1-205ENST00000548821 A0A1B0GV90 55 aa3.9□□□□□ -1.79
GCN1-205ENST00000548821 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
GCN1-205ENST00000548821 SPRR2DP22532 72 aa3.89□□□□□ -1.79
GCN1-205ENST00000548821 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
GCN1-205ENST00000548821 K7ERU9 68 aa3.86□□□□□ -1.79
GCN1-205ENST00000548821 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
GCN1-205ENST00000548821 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
GCN1-205ENST00000548821 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
GCN1-205ENST00000548821 SEC61GP60059 68 aa3.83□□□□□ -1.8
GCN1-205ENST00000548821 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
GCN1-205ENST00000548821 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
GCN1-205ENST00000548821 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
GCN1-205ENST00000548821 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
GCN1-205ENST00000548821 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
GCN1-205ENST00000548821 SNURFQ9Y675 71 aa3.76□□□□□ -1.81
GCN1-205ENST00000548821 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
GCN1-205ENST00000548821 SERP2Q8N6R1 65 aa3.73□□□□□ -1.81
GCN1-205ENST00000548821 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
GCN1-205ENST00000548821 COA5Q86WW8 74 aa3.66□□□□□ -1.82
GCN1-205ENST00000548821 A0A1B0GU33 70 aa3.65□□□□□ -1.83
GCN1-205ENST00000548821 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
GCN1-205ENST00000548821 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
GCN1-205ENST00000548821 A0A0D9SG42 100 aa3.63□□□□□ -1.83
GCN1-205ENST00000548821 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
GCN1-205ENST00000548821 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
GCN1-205ENST00000548821 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
GCN1-205ENST00000548821 MT1EP04732 61 aa3.57□□□□□ -1.84
GCN1-205ENST00000548821 COX7CP15954 63 aa3.57□□□□□ -1.84
GCN1-205ENST00000548821 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
GCN1-205ENST00000548821 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
GCN1-205ENST00000548821 A0A1B0GU69 56 aa3.56□□□□□ -1.84
GCN1-205ENST00000548821 MT1GP13640 62 aa3.56□□□□□ -1.84
GCN1-205ENST00000548821 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms