RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
SMARCC2-205ENST00000548130 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
SMARCC2-205ENST00000548130 A0A087WVE0 104 aa4.32□□□□□ -1.72
SMARCC2-205ENST00000548130 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
SMARCC2-205ENST00000548130 MT2AP02795 61 aa4.3□□□□□ -1.72
SMARCC2-205ENST00000548130 MT1FP04733 61 aa4.28□□□□□ -1.72
SMARCC2-205ENST00000548130 TRAV22A0A0B4J277 110 aa4.27□□□□□ -1.73
SMARCC2-205ENST00000548130 UQCRQO14949 82 aa4.27□□□□□ -1.73
SMARCC2-205ENST00000548130 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
SMARCC2-205ENST00000548130 C1orf64Q8NEQ6 169 aa4.26□□□□□ -1.73
SMARCC2-205ENST00000548130 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
SMARCC2-205ENST00000548130 H0Y9P7 68 aa4.25□□□□□ -1.73
SMARCC2-205ENST00000548130 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
SMARCC2-205ENST00000548130 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
SMARCC2-205ENST00000548130 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
SMARCC2-205ENST00000548130 ATOX1O00244 68 aa4.21□□□□□ -1.74
SMARCC2-205ENST00000548130 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
SMARCC2-205ENST00000548130 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
SMARCC2-205ENST00000548130 C5orf47Q569G3 176 aa4.2□□□□□ -1.74
SMARCC2-205ENST00000548130 S4R3F8 94 aa4.2□□□□□ -1.74
SMARCC2-205ENST00000548130 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
SMARCC2-205ENST00000548130 MP68P56378 58 aa4.17□□□□□ -1.74
SMARCC2-205ENST00000548130 LCA10Q71F78 164 aa4.17□□□□□ -1.74
SMARCC2-205ENST00000548130 KLKP1Q107X0 134 aa4.16□□□□□ -1.74
SMARCC2-205ENST00000548130 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
SMARCC2-205ENST00000548130 CSAG1Q6PB30 78 aa4.15□□□□□ -1.75
SMARCC2-205ENST00000548130 CCDC179H3BU77 68 aa4.14□□□□□ -1.75
SMARCC2-205ENST00000548130 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
SMARCC2-205ENST00000548130 USH2AO75445 5202 aa4.14□□□□□ -1.75
SMARCC2-205ENST00000548130 FAM236AA0A1B0GUQ0 79 aa4.11□□□□□ -1.75
SMARCC2-205ENST00000548130 FAM236BA0A1B0GV22 79 aa4.11□□□□□ -1.75
SMARCC2-205ENST00000548130 H3BPC8 53 aa4.11□□□□□ -1.75
SMARCC2-205ENST00000548130 SSPOA2VEC9 5147 aa4.09□□□□□ -1.76
SMARCC2-205ENST00000548130 A8MUN3 132 aa4.08□□□□□ -1.76
SMARCC2-205ENST00000548130 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
SMARCC2-205ENST00000548130 NDUFC1O43677 76 aa4.07□□□□□ -1.76
SMARCC2-205ENST00000548130 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
SMARCC2-205ENST00000548130 COX7CP15954 63 aa4.03□□□□□ -1.76
SMARCC2-205ENST00000548130 TMEM258P61165 79 aa4.03□□□□□ -1.76
SMARCC2-205ENST00000548130 DMAC1Q96GE9 116 aa4.03□□□□□ -1.76
SMARCC2-205ENST00000548130 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
SMARCC2-205ENST00000548130 SNURFQ9Y675 71 aa4□□□□□ -1.77
SMARCC2-205ENST00000548130 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
SMARCC2-205ENST00000548130 ADM2Q7Z4H4 148 aa3.98□□□□□ -1.77
SMARCC2-205ENST00000548130 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
SMARCC2-205ENST00000548130 H0YAA0 97 aa3.97□□□□□ -1.77
SMARCC2-205ENST00000548130 SERP2Q8N6R1 65 aa3.97□□□□□ -1.77
SMARCC2-205ENST00000548130 MT1BP07438 61 aa3.96□□□□□ -1.78
SMARCC2-205ENST00000548130 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
SMARCC2-205ENST00000548130 ACYP2P14621 99 aa3.95□□□□□ -1.78
SMARCC2-205ENST00000548130 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
SMARCC2-205ENST00000548130 Q5VV11 94 aa3.95□□□□□ -1.78
SMARCC2-205ENST00000548130 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
SMARCC2-205ENST00000548130 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
SMARCC2-205ENST00000548130 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
SMARCC2-205ENST00000548130 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
SMARCC2-205ENST00000548130 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.78
SMARCC2-205ENST00000548130 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
SMARCC2-205ENST00000548130 P0C880 135 aa3.9□□□□□ -1.79
SMARCC2-205ENST00000548130 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SMARCC2-205ENST00000548130 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
SMARCC2-205ENST00000548130 SERP1Q9Y6X1 66 aa3.89□□□□□ -1.79
SMARCC2-205ENST00000548130 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
SMARCC2-205ENST00000548130 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
SMARCC2-205ENST00000548130 A6NN06 94 aa3.86□□□□□ -1.79
SMARCC2-205ENST00000548130 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
SMARCC2-205ENST00000548130 SPTSSBQ8NFR3 76 aa3.86□□□□□ -1.79
SMARCC2-205ENST00000548130 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
SMARCC2-205ENST00000548130 R4GN34 69 aa3.85□□□□□ -1.79
SMARCC2-205ENST00000548130 M0QZ58 72 aa3.84□□□□□ -1.79
SMARCC2-205ENST00000548130 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
SMARCC2-205ENST00000548130 H7BZZ5 65 aa3.82□□□□□ -1.8
SMARCC2-205ENST00000548130 MT3P25713 68 aa3.82□□□□□ -1.8
SMARCC2-205ENST00000548130 COA5Q86WW8 74 aa3.81□□□□□ -1.8
SMARCC2-205ENST00000548130 LINC01554Q52M75 96 aa3.8□□□□□ -1.8
SMARCC2-205ENST00000548130 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
SMARCC2-205ENST00000548130 V9GYY9 64 aa3.78□□□□□ -1.8
SMARCC2-205ENST00000548130 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
SMARCC2-205ENST00000548130 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
SMARCC2-205ENST00000548130 SEC61GP60059 68 aa3.75□□□□□ -1.81
SMARCC2-205ENST00000548130 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
SMARCC2-205ENST00000548130 MT1XP80297 61 aa3.73□□□□□ -1.81
SMARCC2-205ENST00000548130 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
SMARCC2-205ENST00000548130 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
SMARCC2-205ENST00000548130 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
SMARCC2-205ENST00000548130 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
SMARCC2-205ENST00000548130 Q1T7F1 81 aa3.67□□□□□ -1.82
SMARCC2-205ENST00000548130 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
SMARCC2-205ENST00000548130 NEBP20929 6669 aa3.65□□□□□ -1.82
SMARCC2-205ENST00000548130 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
SMARCC2-205ENST00000548130 A0A0D9SG42 100 aa3.61□□□□□ -1.83
SMARCC2-205ENST00000548130 A0A1B0GU33 70 aa3.61□□□□□ -1.83
SMARCC2-205ENST00000548130 SPATA8Q6RVD6 105 aa3.61□□□□□ -1.83
SMARCC2-205ENST00000548130 A0A1B0GU69 56 aa3.6□□□□□ -1.83
SMARCC2-205ENST00000548130 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
SMARCC2-205ENST00000548130 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
SMARCC2-205ENST00000548130 KMT2DO14686 5537 aa3.58□□□□□ -1.84
SMARCC2-205ENST00000548130 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
SMARCC2-205ENST00000548130 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
SMARCC2-205ENST00000548130 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms