RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 H3BPC8 53 aa5.78□□□□□ -1.48
RAB5C-204ENST00000547517 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
RAB5C-204ENST00000547517 MT2AP02795 61 aa5.77□□□□□ -1.49
RAB5C-204ENST00000547517 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
RAB5C-204ENST00000547517 MP68P56378 58 aa5.76□□□□□ -1.49
RAB5C-204ENST00000547517 MT1FP04733 61 aa5.73□□□□□ -1.49
RAB5C-204ENST00000547517 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
RAB5C-204ENST00000547517 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
RAB5C-204ENST00000547517 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
RAB5C-204ENST00000547517 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
RAB5C-204ENST00000547517 USH2AO75445 5202 aa5.66□□□□□ -1.5
RAB5C-204ENST00000547517 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
RAB5C-204ENST00000547517 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
RAB5C-204ENST00000547517 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
RAB5C-204ENST00000547517 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
RAB5C-204ENST00000547517 V9GYY9 64 aa5.63□□□□□ -1.51
RAB5C-204ENST00000547517 H0Y9P7 68 aa5.62□□□□□ -1.51
RAB5C-204ENST00000547517 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
RAB5C-204ENST00000547517 C1orf64Q8NEQ6 169 aa5.61□□□□□ -1.51
RAB5C-204ENST00000547517 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
RAB5C-204ENST00000547517 LINC00208Q96KT6 92 aa5.59□□□□□ -1.51
RAB5C-204ENST00000547517 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
RAB5C-204ENST00000547517 S4R3F8 94 aa5.58□□□□□ -1.52
RAB5C-204ENST00000547517 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
RAB5C-204ENST00000547517 Q1T7F1 81 aa5.55□□□□□ -1.52
RAB5C-204ENST00000547517 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
RAB5C-204ENST00000547517 LCA10Q71F78 164 aa5.54□□□□□ -1.52
RAB5C-204ENST00000547517 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
RAB5C-204ENST00000547517 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
RAB5C-204ENST00000547517 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.54
RAB5C-204ENST00000547517 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
RAB5C-204ENST00000547517 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
RAB5C-204ENST00000547517 COA5Q86WW8 74 aa5.41□□□□□ -1.54
RAB5C-204ENST00000547517 A8MUN3 132 aa5.38□□□□□ -1.55
RAB5C-204ENST00000547517 H3BS24 57 aa5.37□□□□□ -1.55
RAB5C-204ENST00000547517 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
RAB5C-204ENST00000547517 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
RAB5C-204ENST00000547517 ACYP2P14621 99 aa5.36□□□□□ -1.55
RAB5C-204ENST00000547517 PSPHP1O15172 72 aa5.33□□□□□ -1.56
RAB5C-204ENST00000547517 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
RAB5C-204ENST00000547517 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
RAB5C-204ENST00000547517 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
RAB5C-204ENST00000547517 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
RAB5C-204ENST00000547517 CHKB-CPT1BH3BT56 60 aa5.31□□□□□ -1.56
RAB5C-204ENST00000547517 Q5VV11 94 aa5.31□□□□□ -1.56
RAB5C-204ENST00000547517 DMAC1Q96GE9 116 aa5.3□□□□□ -1.56
RAB5C-204ENST00000547517 NEBP20929 6669 aa5.29□□□□□ -1.56
RAB5C-204ENST00000547517 MT1BP07438 61 aa5.28□□□□□ -1.56
RAB5C-204ENST00000547517 H0YAA0 97 aa5.27□□□□□ -1.57
RAB5C-204ENST00000547517 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
RAB5C-204ENST00000547517 A6NED7 52 aa5.26□□□□□ -1.57
RAB5C-204ENST00000547517 CRIPTQ9P021 101 aa5.26□□□□□ -1.57
RAB5C-204ENST00000547517 ADM2Q7Z4H4 148 aa5.25□□□□□ -1.57
RAB5C-204ENST00000547517 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
RAB5C-204ENST00000547517 SPTSSBQ8NFR3 76 aa5.21□□□□□ -1.58
RAB5C-204ENST00000547517 A6NN06 94 aa5.19□□□□□ -1.58
RAB5C-204ENST00000547517 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
RAB5C-204ENST00000547517 A0A1B0GU69 56 aa5.16□□□□□ -1.58
RAB5C-204ENST00000547517 P0C880 135 aa5.14□□□□□ -1.59
RAB5C-204ENST00000547517 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
RAB5C-204ENST00000547517 SEC61GP60059 68 aa5.12□□□□□ -1.59
RAB5C-204ENST00000547517 R4GN34 69 aa5.11□□□□□ -1.59
RAB5C-204ENST00000547517 UQCR11O14957 56 aa5.1□□□□□ -1.59
RAB5C-204ENST00000547517 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
RAB5C-204ENST00000547517 M0QZ58 72 aa5.08□□□□□ -1.6
RAB5C-204ENST00000547517 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
RAB5C-204ENST00000547517 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
RAB5C-204ENST00000547517 LINC01554Q52M75 96 aa5.02□□□□□ -1.61
RAB5C-204ENST00000547517 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
RAB5C-204ENST00000547517 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
RAB5C-204ENST00000547517 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
RAB5C-204ENST00000547517 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
RAB5C-204ENST00000547517 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
RAB5C-204ENST00000547517 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
RAB5C-204ENST00000547517 A8MU10 97 aa4.98□□□□□ -1.61
RAB5C-204ENST00000547517 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
RAB5C-204ENST00000547517 MT1XP80297 61 aa4.97□□□□□ -1.61
RAB5C-204ENST00000547517 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
RAB5C-204ENST00000547517 A0A1B0GU33 70 aa4.88□□□□□ -1.63
RAB5C-204ENST00000547517 K7ERS5 55 aa4.88□□□□□ -1.63
RAB5C-204ENST00000547517 KMT2DO14686 5537 aa4.87□□□□□ -1.63
RAB5C-204ENST00000547517 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
RAB5C-204ENST00000547517 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
RAB5C-204ENST00000547517 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
RAB5C-204ENST00000547517 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
RAB5C-204ENST00000547517 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
RAB5C-204ENST00000547517 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
RAB5C-204ENST00000547517 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
RAB5C-204ENST00000547517 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
RAB5C-204ENST00000547517 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
RAB5C-204ENST00000547517 A0A0D9SG42 100 aa4.73□□□□□ -1.65
RAB5C-204ENST00000547517 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
RAB5C-204ENST00000547517 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
RAB5C-204ENST00000547517 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
RAB5C-204ENST00000547517 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
RAB5C-204ENST00000547517 SPRR2EP22531 72 aa4.68□□□□□ -1.66
RAB5C-204ENST00000547517 SPRR2BP35325 72 aa4.68□□□□□ -1.66
RAB5C-204ENST00000547517 SPRR2AP35326 72 aa4.68□□□□□ -1.66
RAB5C-204ENST00000547517 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
RAB5C-204ENST00000547517 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms