RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NEBP20929 6669 aa5.92□□□□□ -1.46
CPSF6-204ENST00000547486 A0A087WVE0 104 aa5.92□□□□□ -1.46
CPSF6-204ENST00000547486 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
CPSF6-204ENST00000547486 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
CPSF6-204ENST00000547486 KRTAP10-5P60370 271 aa5.9□□□□□ -1.46
CPSF6-204ENST00000547486 ETDBQ3ZM63 59 aa5.9□□□□□ -1.46
CPSF6-204ENST00000547486 F8W1H4 67 aa5.89□□□□□ -1.47
CPSF6-204ENST00000547486 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
CPSF6-204ENST00000547486 GTF2H5Q6ZYL4 71 aa5.88□□□□□ -1.47
CPSF6-204ENST00000547486 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
CPSF6-204ENST00000547486 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
CPSF6-204ENST00000547486 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
CPSF6-204ENST00000547486 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
CPSF6-204ENST00000547486 PCP4L1A6NKN8 68 aa5.77□□□□□ -1.49
CPSF6-204ENST00000547486 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
CPSF6-204ENST00000547486 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
CPSF6-204ENST00000547486 UQCRQO14949 82 aa5.75□□□□□ -1.49
CPSF6-204ENST00000547486 ACYP1P07311 99 aa5.75□□□□□ -1.49
CPSF6-204ENST00000547486 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
CPSF6-204ENST00000547486 NDUFC1O43677 76 aa5.74□□□□□ -1.49
CPSF6-204ENST00000547486 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
CPSF6-204ENST00000547486 KMT2DO14686 5537 aa5.74□□□□□ -1.49
CPSF6-204ENST00000547486 H0Y9P7 68 aa5.73□□□□□ -1.49
CPSF6-204ENST00000547486 H0YAA0 97 aa5.72□□□□□ -1.49
CPSF6-204ENST00000547486 ATP5EP2Q5VTU8 51 aa5.71□□□□□ -1.5
CPSF6-204ENST00000547486 FAM240AA0A1B0GVK7 77 aa5.7□□□□□ -1.5
CPSF6-204ENST00000547486 ATOX1O00244 68 aa5.7□□□□□ -1.5
CPSF6-204ENST00000547486 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
CPSF6-204ENST00000547486 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
CPSF6-204ENST00000547486 ADM2Q7Z4H4 148 aa5.69□□□□□ -1.5
CPSF6-204ENST00000547486 A8MUN3 132 aa5.65□□□□□ -1.5
CPSF6-204ENST00000547486 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
CPSF6-204ENST00000547486 MT1XP80297 61 aa5.63□□□□□ -1.51
CPSF6-204ENST00000547486 LINC00643Q86TS7 51 aa5.61□□□□□ -1.51
CPSF6-204ENST00000547486 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
CPSF6-204ENST00000547486 P0C880 135 aa5.57□□□□□ -1.52
CPSF6-204ENST00000547486 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
CPSF6-204ENST00000547486 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
CPSF6-204ENST00000547486 MP68P56378 58 aa5.55□□□□□ -1.52
CPSF6-204ENST00000547486 PLAC4Q8WY50 150 aa5.55□□□□□ -1.52
CPSF6-204ENST00000547486 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CPSF6-204ENST00000547486 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
CPSF6-204ENST00000547486 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
CPSF6-204ENST00000547486 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
CPSF6-204ENST00000547486 R4GN34 69 aa5.52□□□□□ -1.53
CPSF6-204ENST00000547486 SPRR2EP22531 72 aa5.5□□□□□ -1.53
CPSF6-204ENST00000547486 SPRR2BP35325 72 aa5.5□□□□□ -1.53
CPSF6-204ENST00000547486 SPRR2AP35326 72 aa5.5□□□□□ -1.53
CPSF6-204ENST00000547486 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
CPSF6-204ENST00000547486 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
CPSF6-204ENST00000547486 M0QZ58 72 aa5.48□□□□□ -1.53
CPSF6-204ENST00000547486 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
CPSF6-204ENST00000547486 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
CPSF6-204ENST00000547486 A0A1B0GV90 55 aa5.45□□□□□ -1.54
CPSF6-204ENST00000547486 H3BPC8 53 aa5.45□□□□□ -1.54
CPSF6-204ENST00000547486 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
CPSF6-204ENST00000547486 C20orf197Q8N268 126 aa5.45□□□□□ -1.54
CPSF6-204ENST00000547486 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
CPSF6-204ENST00000547486 SCGB1A1P11684 91 aa5.39□□□□□ -1.55
CPSF6-204ENST00000547486 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
CPSF6-204ENST00000547486 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
CPSF6-204ENST00000547486 KRTAP2-2Q9BYT5 123 aa5.34□□□□□ -1.55
CPSF6-204ENST00000547486 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
CPSF6-204ENST00000547486 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
CPSF6-204ENST00000547486 J3QR89 54 aa5.32□□□□□ -1.56
CPSF6-204ENST00000547486 SPRR2DP22532 72 aa5.32□□□□□ -1.56
CPSF6-204ENST00000547486 ACYP2P14621 99 aa5.31□□□□□ -1.56
CPSF6-204ENST00000547486 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
CPSF6-204ENST00000547486 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
CPSF6-204ENST00000547486 MT-ATP8P03928 68 aa5.26□□□□□ -1.57
CPSF6-204ENST00000547486 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
CPSF6-204ENST00000547486 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
CPSF6-204ENST00000547486 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
CPSF6-204ENST00000547486 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
CPSF6-204ENST00000547486 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
CPSF6-204ENST00000547486 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
CPSF6-204ENST00000547486 K7ERU9 68 aa5.07□□□□□ -1.6
CPSF6-204ENST00000547486 SPANXA2-OT1Q8N9U9 137 aa5.07□□□□□ -1.6
CPSF6-204ENST00000547486 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
CPSF6-204ENST00000547486 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
CPSF6-204ENST00000547486 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
CPSF6-204ENST00000547486 MT1EP04732 61 aa4.99□□□□□ -1.61
CPSF6-204ENST00000547486 SERP2Q8N6R1 65 aa4.99□□□□□ -1.61
CPSF6-204ENST00000547486 A0A0D9SG42 100 aa4.96□□□□□ -1.62
CPSF6-204ENST00000547486 COA5Q86WW8 74 aa4.96□□□□□ -1.62
CPSF6-204ENST00000547486 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
CPSF6-204ENST00000547486 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
CPSF6-204ENST00000547486 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
CPSF6-204ENST00000547486 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
CPSF6-204ENST00000547486 SEC61GP60059 68 aa4.88□□□□□ -1.63
CPSF6-204ENST00000547486 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
CPSF6-204ENST00000547486 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
CPSF6-204ENST00000547486 A0A1B0GU33 70 aa4.86□□□□□ -1.63
CPSF6-204ENST00000547486 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
CPSF6-204ENST00000547486 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
CPSF6-204ENST00000547486 MT1GP13640 62 aa4.82□□□□□ -1.64
CPSF6-204ENST00000547486 COX7CP15954 63 aa4.79□□□□□ -1.64
CPSF6-204ENST00000547486 H7BZZ5 65 aa4.78□□□□□ -1.64
CPSF6-204ENST00000547486 MT1MQ8N339 61 aa4.75□□□□□ -1.65
CPSF6-204ENST00000547486 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms