RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
CHD4-213ENST00000545584 UQCRQO14949 82 aa8.83□□□□□ -1
CHD4-213ENST00000545584 CRIPTQ9P021 101 aa8.82□□□□□ -1
CHD4-213ENST00000545584 A0A087WVE0 104 aa8.81□□□□□ -1
CHD4-213ENST00000545584 ATOX1O00244 68 aa8.81□□□□□ -1
CHD4-213ENST00000545584 IMUPQ9GZP8 106 aa8.8□□□□□ -1
CHD4-213ENST00000545584 H0Y9P7 68 aa8.79□□□□□ -1
CHD4-213ENST00000545584 KRTAP10-5P60370 271 aa8.77□□□□□ -1.01
CHD4-213ENST00000545584 A0A1B0GV90 55 aa8.76□□□□□ -1.01
CHD4-213ENST00000545584 NDUFC1O43677 76 aa8.76□□□□□ -1.01
CHD4-213ENST00000545584 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
CHD4-213ENST00000545584 A8MUN3 132 aa8.69□□□□□ -1.02
CHD4-213ENST00000545584 H0YAA0 97 aa8.68□□□□□ -1.02
CHD4-213ENST00000545584 LINC00208Q96KT6 92 aa8.65□□□□□ -1.02
CHD4-213ENST00000545584 MP68P56378 58 aa8.61□□□□□ -1.03
CHD4-213ENST00000545584 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
CHD4-213ENST00000545584 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
CHD4-213ENST00000545584 NEBP20929 6669 aa8.57□□□□□ -1.04
CHD4-213ENST00000545584 J3QR89 54 aa8.53□□□□□ -1.04
CHD4-213ENST00000545584 KRTAP5-9P26371 169 aa8.5□□□□□ -1.05
CHD4-213ENST00000545584 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
CHD4-213ENST00000545584 H3BPC8 53 aa8.45□□□□□ -1.06
CHD4-213ENST00000545584 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
CHD4-213ENST00000545584 MUC12Q9UKN1 5478 aa8.43□□□□□ -1.06
CHD4-213ENST00000545584 C20orf197Q8N268 126 aa8.43□□□□□ -1.06
CHD4-213ENST00000545584 R4GN34 69 aa8.42□□□□□ -1.06
CHD4-213ENST00000545584 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
CHD4-213ENST00000545584 KRTAP20-1Q3LI63 56 aa8.39□□□□□ -1.07
CHD4-213ENST00000545584 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
CHD4-213ENST00000545584 P0C880 135 aa8.35□□□□□ -1.07
CHD4-213ENST00000545584 M0QZ58 72 aa8.33□□□□□ -1.08
CHD4-213ENST00000545584 MT1XP80297 61 aa8.33□□□□□ -1.08
CHD4-213ENST00000545584 KMT2DO14686 5537 aa8.29□□□□□ -1.08
CHD4-213ENST00000545584 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
CHD4-213ENST00000545584 SPRR2FQ96RM1 72 aa8.26□□□□□ -1.09
CHD4-213ENST00000545584 LINC01554Q52M75 96 aa8.23□□□□□ -1.09
CHD4-213ENST00000545584 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
CHD4-213ENST00000545584 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
CHD4-213ENST00000545584 K7ERU9 68 aa8.21□□□□□ -1.1
CHD4-213ENST00000545584 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
CHD4-213ENST00000545584 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
CHD4-213ENST00000545584 ACYP2P14621 99 aa8.18□□□□□ -1.1
CHD4-213ENST00000545584 MDN1Q9NU22 5596 aa8.17□□□□□ -1.1
CHD4-213ENST00000545584 SPRR2EP22531 72 aa8.17□□□□□ -1.1
CHD4-213ENST00000545584 SPRR2BP35325 72 aa8.17□□□□□ -1.1
CHD4-213ENST00000545584 SPRR2AP35326 72 aa8.17□□□□□ -1.1
CHD4-213ENST00000545584 SMIM20Q8N5G0 67 aa8.16□□□□□ -1.1
CHD4-213ENST00000545584 KRTAP2-3P0C7H8 128 aa8.15□□□□□ -1.1
CHD4-213ENST00000545584 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
CHD4-213ENST00000545584 KRTAP2-4Q9BYR9 128 aa8.15□□□□□ -1.1
CHD4-213ENST00000545584 CHKB-CPT1BH3BT56 60 aa8.06□□□□□ -1.12
CHD4-213ENST00000545584 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
CHD4-213ENST00000545584 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
CHD4-213ENST00000545584 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
CHD4-213ENST00000545584 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
CHD4-213ENST00000545584 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
CHD4-213ENST00000545584 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
CHD4-213ENST00000545584 SERP2Q8N6R1 65 aa7.91□□□□□ -1.14
CHD4-213ENST00000545584 SPRR2DP22532 72 aa7.9□□□□□ -1.14
CHD4-213ENST00000545584 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
CHD4-213ENST00000545584 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
CHD4-213ENST00000545584 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
CHD4-213ENST00000545584 CAMK2N1Q7Z7J9 78 aa7.74□□□□□ -1.17
CHD4-213ENST00000545584 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
CHD4-213ENST00000545584 COA5Q86WW8 74 aa7.71□□□□□ -1.18
CHD4-213ENST00000545584 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
CHD4-213ENST00000545584 COX7CP15954 63 aa7.66□□□□□ -1.18
CHD4-213ENST00000545584 SEC61GP60059 68 aa7.64□□□□□ -1.19
CHD4-213ENST00000545584 SERP1Q9Y6X1 66 aa7.62□□□□□ -1.19
CHD4-213ENST00000545584 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
CHD4-213ENST00000545584 H7BZZ5 65 aa7.56□□□□□ -1.2
CHD4-213ENST00000545584 A0A0D9SG42 100 aa7.54□□□□□ -1.2
CHD4-213ENST00000545584 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
CHD4-213ENST00000545584 A0A1B0GU33 70 aa7.46□□□□□ -1.22
CHD4-213ENST00000545584 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.22
CHD4-213ENST00000545584 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
CHD4-213ENST00000545584 MT1EP04732 61 aa7.4□□□□□ -1.22
CHD4-213ENST00000545584 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
CHD4-213ENST00000545584 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
CHD4-213ENST00000545584 ANAPC13Q9BS18 74 aa7.39□□□□□ -1.23
CHD4-213ENST00000545584 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
CHD4-213ENST00000545584 A0A1B0GU69 56 aa7.3□□□□□ -1.24
CHD4-213ENST00000545584 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
CHD4-213ENST00000545584 CCDC179H3BU77 68 aa7.27□□□□□ -1.25
CHD4-213ENST00000545584 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
CHD4-213ENST00000545584 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
CHD4-213ENST00000545584 MT1GP13640 62 aa7.22□□□□□ -1.25
CHD4-213ENST00000545584 A8MU10 97 aa7.2□□□□□ -1.26
CHD4-213ENST00000545584 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
CHD4-213ENST00000545584 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
CHD4-213ENST00000545584 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
CHD4-213ENST00000545584 TNP1P09430 55 aa7.1□□□□□ -1.27
CHD4-213ENST00000545584 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
CHD4-213ENST00000545584 MT1MQ8N339 61 aa7.06□□□□□ -1.28
CHD4-213ENST00000545584 MT1LQ93083 61 aa7.05□□□□□ -1.28
CHD4-213ENST00000545584 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
CHD4-213ENST00000545584 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
CHD4-213ENST00000545584 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
CHD4-213ENST00000545584 GPR98Q8WXG9 6306 aa7□□□□□ -1.29
CHD4-213ENST00000545584 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms