RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TRAV22A0A0B4J277 110 aa9.39□□□□□ -0.91
SCARB1-210ENST00000545493 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
SCARB1-210ENST00000545493 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
SCARB1-210ENST00000545493 NEBP20929 6669 aa9.33□□□□□ -0.92
SCARB1-210ENST00000545493 ATP5EP2Q5VTU8 51 aa9.27□□□□□ -0.93
SCARB1-210ENST00000545493 H0Y9P7 68 aa9.23□□□□□ -0.93
SCARB1-210ENST00000545493 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
SCARB1-210ENST00000545493 CRIPTQ9P021 101 aa9.23□□□□□ -0.93
SCARB1-210ENST00000545493 UQCRQO14949 82 aa9.22□□□□□ -0.93
SCARB1-210ENST00000545493 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
SCARB1-210ENST00000545493 J3QR89 54 aa9.21□□□□□ -0.94
SCARB1-210ENST00000545493 ATOX1O00244 68 aa9.18□□□□□ -0.94
SCARB1-210ENST00000545493 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
SCARB1-210ENST00000545493 MDN1Q9NU22 5596 aa9.16□□□□□ -0.94
SCARB1-210ENST00000545493 H0YAA0 97 aa9.15□□□□□ -0.94
SCARB1-210ENST00000545493 KMT2DO14686 5537 aa9.14□□□□□ -0.95
SCARB1-210ENST00000545493 NDUFC1O43677 76 aa9.13□□□□□ -0.95
SCARB1-210ENST00000545493 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
SCARB1-210ENST00000545493 A8MUN3 132 aa9.08□□□□□ -0.96
SCARB1-210ENST00000545493 K7ERU9 68 aa9.06□□□□□ -0.96
SCARB1-210ENST00000545493 ADM2Q7Z4H4 148 aa9.04□□□□□ -0.96
SCARB1-210ENST00000545493 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
SCARB1-210ENST00000545493 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
SCARB1-210ENST00000545493 MT-ATP8P03928 68 aa8.94□□□□□ -0.98
SCARB1-210ENST00000545493 MP68P56378 58 aa8.94□□□□□ -0.98
SCARB1-210ENST00000545493 MT1XP80297 61 aa8.92□□□□□ -0.98
SCARB1-210ENST00000545493 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
SCARB1-210ENST00000545493 P0C880 135 aa8.85□□□□□ -0.99
SCARB1-210ENST00000545493 PRO2289Q9P1D8 64 aa8.84□□□□□ -0.99
SCARB1-210ENST00000545493 DMAC1Q96GE9 116 aa8.82□□□□□ -1
SCARB1-210ENST00000545493 R4GN34 69 aa8.81□□□□□ -1
SCARB1-210ENST00000545493 H3BPC8 53 aa8.8□□□□□ -1
SCARB1-210ENST00000545493 PLAC4Q8WY50 150 aa8.79□□□□□ -1
SCARB1-210ENST00000545493 SCGB1A1P11684 91 aa8.78□□□□□ -1
SCARB1-210ENST00000545493 SPRR2FQ96RM1 72 aa8.77□□□□□ -1.01
SCARB1-210ENST00000545493 M0QZ58 72 aa8.75□□□□□ -1.01
SCARB1-210ENST00000545493 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
SCARB1-210ENST00000545493 KRTAP3-2Q9BYR7 98 aa8.75□□□□□ -1.01
SCARB1-210ENST00000545493 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
SCARB1-210ENST00000545493 SPRR2EP22531 72 aa8.67□□□□□ -1.02
SCARB1-210ENST00000545493 SPRR2BP35325 72 aa8.67□□□□□ -1.02
SCARB1-210ENST00000545493 SPRR2AP35326 72 aa8.67□□□□□ -1.02
SCARB1-210ENST00000545493 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
SCARB1-210ENST00000545493 TRAV7A0A075B6U4 112 aa8.65□□□□□ -1.02
SCARB1-210ENST00000545493 SMIM20Q8N5G0 67 aa8.65□□□□□ -1.02
SCARB1-210ENST00000545493 LINC01554Q52M75 96 aa8.62□□□□□ -1.03
SCARB1-210ENST00000545493 KRTAP2-3P0C7H8 128 aa8.61□□□□□ -1.03
SCARB1-210ENST00000545493 KRTAP2-4Q9BYR9 128 aa8.61□□□□□ -1.03
SCARB1-210ENST00000545493 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
SCARB1-210ENST00000545493 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
SCARB1-210ENST00000545493 LCE1AQ5T7P2 110 aa8.56□□□□□ -1.04
SCARB1-210ENST00000545493 KRTAP10-7P60409 375 aaPredicted RBP8.51□□□□□ -1.05
SCARB1-210ENST00000545493 ACYP2P14621 99 aa8.5□□□□□ -1.05
SCARB1-210ENST00000545493 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
SCARB1-210ENST00000545493 KRTAP10-12P60413 245 aa8.45□□□□□ -1.06
SCARB1-210ENST00000545493 SNURFQ9Y675 71 aa8.43□□□□□ -1.06
SCARB1-210ENST00000545493 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
SCARB1-210ENST00000545493 SPRR2DP22532 72 aa8.38□□□□□ -1.07
SCARB1-210ENST00000545493 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
SCARB1-210ENST00000545493 COX7CP15954 63 aa8.34□□□□□ -1.07
SCARB1-210ENST00000545493 KRTAP2-2Q9BYT5 123 aa8.34□□□□□ -1.07
SCARB1-210ENST00000545493 KRTAP2-1Q9BYU5 128 aa8.34□□□□□ -1.07
SCARB1-210ENST00000545493 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
SCARB1-210ENST00000545493 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
SCARB1-210ENST00000545493 ANAPC13Q9BS18 74 aa8.21□□□□□ -1.1
SCARB1-210ENST00000545493 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
SCARB1-210ENST00000545493 LCE3BQ5TA77 95 aa8.17□□□□□ -1.1
SCARB1-210ENST00000545493 H7BZZ5 65 aa8.15□□□□□ -1.1
SCARB1-210ENST00000545493 CCDC179H3BU77 68 aa8.09□□□□□ -1.11
SCARB1-210ENST00000545493 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
SCARB1-210ENST00000545493 COA5Q86WW8 74 aa8.02□□□□□ -1.13
SCARB1-210ENST00000545493 KRTAP19-7Q3SYF9 63 aa7.98□□□□□ -1.13
SCARB1-210ENST00000545493 MT1EP04732 61 aa7.92□□□□□ -1.14
SCARB1-210ENST00000545493 A0A0D9SG42 100 aa7.91□□□□□ -1.14
SCARB1-210ENST00000545493 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
SCARB1-210ENST00000545493 DSTQ03001 7570 aaKnown RBP7.88□□□□□ -1.15
SCARB1-210ENST00000545493 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
SCARB1-210ENST00000545493 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
SCARB1-210ENST00000545493 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
SCARB1-210ENST00000545493 SEC61GP60059 68 aa7.84□□□□□ -1.15
SCARB1-210ENST00000545493 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
SCARB1-210ENST00000545493 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
SCARB1-210ENST00000545493 A0A1B0GU33 70 aa7.77□□□□□ -1.17
SCARB1-210ENST00000545493 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
SCARB1-210ENST00000545493 TMEM258P61165 79 aa7.77□□□□□ -1.17
SCARB1-210ENST00000545493 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
SCARB1-210ENST00000545493 GPR98Q8WXG9 6306 aa7.68□□□□□ -1.18
SCARB1-210ENST00000545493 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
SCARB1-210ENST00000545493 MT1GP13640 62 aa7.6□□□□□ -1.19
SCARB1-210ENST00000545493 A0A1B0GU69 56 aa7.57□□□□□ -1.2
SCARB1-210ENST00000545493 A8MU10 97 aa7.57□□□□□ -1.2
SCARB1-210ENST00000545493 SMIM26A0A096LP01 95 aa7.54□□□□□ -1.2
SCARB1-210ENST00000545493 MT1MQ8N339 61 aa7.54□□□□□ -1.2
SCARB1-210ENST00000545493 MT1LQ93083 61 aa7.53□□□□□ -1.2
SCARB1-210ENST00000545493 PCP4P48539 62 aa7.52□□□□□ -1.21
SCARB1-210ENST00000545493 PP632Q6XCG6 107 aa7.52□□□□□ -1.21
SCARB1-210ENST00000545493 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
SCARB1-210ENST00000545493 HMCN1Q96RW7 5635 aa7.5□□□□□ -1.21
SCARB1-210ENST00000545493 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
SCARB1-210ENST00000545493 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms