RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 Q5VV11 94 aa5.78□□□□□ -1.48
USP28-212ENST00000544750 LINC00643Q86TS7 51 aa5.77□□□□□ -1.49
USP28-212ENST00000544750 HIST1H4AP62805 103 aaKnown RBP5.76□□□□□ -1.49
USP28-212ENST00000544750 A0A087WVE0 104 aa5.75□□□□□ -1.49
USP28-212ENST00000544750 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
USP28-212ENST00000544750 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
USP28-212ENST00000544750 C1orf64Q8NEQ6 169 aa5.73□□□□□ -1.49
USP28-212ENST00000544750 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
USP28-212ENST00000544750 UQCRQO14949 82 aa5.7□□□□□ -1.5
USP28-212ENST00000544750 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
USP28-212ENST00000544750 S4R3F8 94 aa5.68□□□□□ -1.5
USP28-212ENST00000544750 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 H0Y9P7 68 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 LCA10Q71F78 164 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
USP28-212ENST00000544750 J3QR89 54 aa5.64□□□□□ -1.51
USP28-212ENST00000544750 ATOX1O00244 68 aa5.64□□□□□ -1.51
USP28-212ENST00000544750 SPRR2EP22531 72 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 SPRR2BP35325 72 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 SPRR2AP35326 72 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
USP28-212ENST00000544750 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
USP28-212ENST00000544750 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
USP28-212ENST00000544750 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
USP28-212ENST00000544750 LINC00208Q96KT6 92 aa5.58□□□□□ -1.52
USP28-212ENST00000544750 MP68P56378 58 aa5.53□□□□□ -1.52
USP28-212ENST00000544750 MT-ATP8P03928 68 aa5.52□□□□□ -1.53
USP28-212ENST00000544750 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
USP28-212ENST00000544750 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
USP28-212ENST00000544750 A8MUN3 132 aa5.5□□□□□ -1.53
USP28-212ENST00000544750 H3BPC8 53 aa5.49□□□□□ -1.53
USP28-212ENST00000544750 K7ERU9 68 aa5.49□□□□□ -1.53
USP28-212ENST00000544750 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
USP28-212ENST00000544750 NDUFC1O43677 76 aa5.45□□□□□ -1.54
USP28-212ENST00000544750 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
USP28-212ENST00000544750 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
USP28-212ENST00000544750 H0YAA0 97 aa5.43□□□□□ -1.54
USP28-212ENST00000544750 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
USP28-212ENST00000544750 DMAC1Q96GE9 116 aa5.42□□□□□ -1.54
USP28-212ENST00000544750 SPRR2DP22532 72 aa5.41□□□□□ -1.54
USP28-212ENST00000544750 MT1XP80297 61 aa5.41□□□□□ -1.54
USP28-212ENST00000544750 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
USP28-212ENST00000544750 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
USP28-212ENST00000544750 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
USP28-212ENST00000544750 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
USP28-212ENST00000544750 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
USP28-212ENST00000544750 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
USP28-212ENST00000544750 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
USP28-212ENST00000544750 P0C880 135 aa5.29□□□□□ -1.56
USP28-212ENST00000544750 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
USP28-212ENST00000544750 SNURFQ9Y675 71 aa5.28□□□□□ -1.56
USP28-212ENST00000544750 ACYP2P14621 99 aa5.26□□□□□ -1.57
USP28-212ENST00000544750 SERP2Q8N6R1 65 aa5.24□□□□□ -1.57
USP28-212ENST00000544750 C20orf197Q8N268 126 aa5.22□□□□□ -1.57
USP28-212ENST00000544750 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
USP28-212ENST00000544750 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
USP28-212ENST00000544750 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
USP28-212ENST00000544750 R4GN34 69 aa5.19□□□□□ -1.58
USP28-212ENST00000544750 M0QZ58 72 aa5.17□□□□□ -1.58
USP28-212ENST00000544750 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
USP28-212ENST00000544750 SPTSSBQ8NFR3 76 aa5.14□□□□□ -1.59
USP28-212ENST00000544750 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
USP28-212ENST00000544750 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
USP28-212ENST00000544750 COX7CP15954 63 aa5.11□□□□□ -1.59
USP28-212ENST00000544750 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
USP28-212ENST00000544750 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
USP28-212ENST00000544750 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
USP28-212ENST00000544750 H3BS24 57 aa5.07□□□□□ -1.6
USP28-212ENST00000544750 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
USP28-212ENST00000544750 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
USP28-212ENST00000544750 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
USP28-212ENST00000544750 COA5Q86WW8 74 aa5.05□□□□□ -1.6
USP28-212ENST00000544750 H7BZZ5 65 aa5.04□□□□□ -1.6
USP28-212ENST00000544750 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
USP28-212ENST00000544750 ANAPC13Q9BS18 74 aa4.96□□□□□ -1.62
USP28-212ENST00000544750 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
USP28-212ENST00000544750 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
USP28-212ENST00000544750 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
USP28-212ENST00000544750 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
USP28-212ENST00000544750 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 SEC61GP60059 68 aa4.84□□□□□ -1.63
USP28-212ENST00000544750 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
USP28-212ENST00000544750 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
USP28-212ENST00000544750 MT1EP04732 61 aa4.81□□□□□ -1.64
USP28-212ENST00000544750 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
USP28-212ENST00000544750 A0A1B0GU33 70 aa4.8□□□□□ -1.64
USP28-212ENST00000544750 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
USP28-212ENST00000544750 A0A0D9SG42 100 aa4.79□□□□□ -1.64
USP28-212ENST00000544750 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
USP28-212ENST00000544750 MT4P47944 62 aa4.77□□□□□ -1.65
USP28-212ENST00000544750 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
USP28-212ENST00000544750 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
USP28-212ENST00000544750 A0A1B0GU69 56 aa4.75□□□□□ -1.65
USP28-212ENST00000544750 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms