RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 MDN1Q9NU22 5596 aa11.82□□□□□ -0.52
PDCD2-211ENST00000544336 TRAV22A0A0B4J277 110 aa11.79□□□□□ -0.52
PDCD2-211ENST00000544336 LOC101927531A0A1B0GV80 90 aa11.78□□□□□ -0.52
PDCD2-211ENST00000544336 NDUFC1O43677 76 aa11.72□□□□□ -0.53
PDCD2-211ENST00000544336 ETDBQ3ZM63 59 aa11.68□□□□□ -0.54
PDCD2-211ENST00000544336 H0YAA0 97 aa11.67□□□□□ -0.54
PDCD2-211ENST00000544336 SPRR2FQ96RM1 72 aa11.66□□□□□ -0.54
PDCD2-211ENST00000544336 KRTAP2-3P0C7H8 128 aa11.65□□□□□ -0.54
PDCD2-211ENST00000544336 KRTAP2-4Q9BYR9 128 aa11.65□□□□□ -0.54
PDCD2-211ENST00000544336 PCP4L1A6NKN8 68 aa11.64□□□□□ -0.55
PDCD2-211ENST00000544336 GTF2H5Q6ZYL4 71 aa11.64□□□□□ -0.55
PDCD2-211ENST00000544336 ADM2Q7Z4H4 148 aa11.63□□□□□ -0.55
PDCD2-211ENST00000544336 A8MUN3 132 aa11.61□□□□□ -0.55
PDCD2-211ENST00000544336 F8W1H4 67 aa11.61□□□□□ -0.55
PDCD2-211ENST00000544336 H0Y9P7 68 aa11.59□□□□□ -0.55
PDCD2-211ENST00000544336 SPRR2EP22531 72 aa11.59□□□□□ -0.55
PDCD2-211ENST00000544336 SPRR2BP35325 72 aa11.59□□□□□ -0.55
PDCD2-211ENST00000544336 SPRR2AP35326 72 aa11.59□□□□□ -0.55
PDCD2-211ENST00000544336 PRO2289Q9P1D8 64 aa11.59□□□□□ -0.55
PDCD2-211ENST00000544336 MT1XP80297 61 aa11.55□□□□□ -0.56
PDCD2-211ENST00000544336 UQCRQO14949 82 aa11.54□□□□□ -0.56
PDCD2-211ENST00000544336 ACYP1P07311 99 aa11.54□□□□□ -0.56
PDCD2-211ENST00000544336 ATOX1O00244 68 aa11.52□□□□□ -0.57
PDCD2-211ENST00000544336 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
PDCD2-211ENST00000544336 PLAC4Q8WY50 150 aa11.49□□□□□ -0.57
PDCD2-211ENST00000544336 KRTAP8-1Q8IUC2 63 aa11.46□□□□□ -0.57
PDCD2-211ENST00000544336 ATP5EP2Q5VTU8 51 aa11.41□□□□□ -0.58
PDCD2-211ENST00000544336 LINC00208Q96KT6 92 aa11.36□□□□□ -0.59
PDCD2-211ENST00000544336 R4GN34 69 aa11.35□□□□□ -0.59
PDCD2-211ENST00000544336 LCE1AQ5T7P2 110 aa11.34□□□□□ -0.59
PDCD2-211ENST00000544336 P0C880 135 aa11.3□□□□□ -0.6
PDCD2-211ENST00000544336 KRTAP12-2P59991 146 aa11.3□□□□□ -0.6
PDCD2-211ENST00000544336 FAM240AA0A1B0GVK7 77 aa11.29□□□□□ -0.6
PDCD2-211ENST00000544336 M0QZ58 72 aa11.27□□□□□ -0.61
PDCD2-211ENST00000544336 KRTAP2-2Q9BYT5 123 aa11.25□□□□□ -0.61
PDCD2-211ENST00000544336 KRTAP2-1Q9BYU5 128 aa11.25□□□□□ -0.61
PDCD2-211ENST00000544336 KRTAP4-8A0A0G2JLE6 195 aa11.23□□□□□ -0.61
PDCD2-211ENST00000544336 KRTAP4-8Q9BYQ9 185 aa11.23□□□□□ -0.61
PDCD2-211ENST00000544336 C20orf197Q8N268 126 aa11.22□□□□□ -0.61
PDCD2-211ENST00000544336 SPRR2DP22532 72 aa11.21□□□□□ -0.61
PDCD2-211ENST00000544336 MP68P56378 58 aa11.2□□□□□ -0.62
PDCD2-211ENST00000544336 LINC01554Q52M75 96 aa11.17□□□□□ -0.62
PDCD2-211ENST00000544336 OCR1Q9BZK8 76 aa11.13□□□□□ -0.63
PDCD2-211ENST00000544336 LINC00643Q86TS7 51 aa11.12□□□□□ -0.63
PDCD2-211ENST00000544336 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
PDCD2-211ENST00000544336 KRTAP10-7P60409 375 aaPredicted RBP11.05□□□□□ -0.64
PDCD2-211ENST00000544336 A0A1B0GV90 55 aa11.04□□□□□ -0.64
PDCD2-211ENST00000544336 DMAC1Q96GE9 116 aa11.02□□□□□ -0.65
PDCD2-211ENST00000544336 KRTAP10-12P60413 245 aa10.94□□□□□ -0.66
PDCD2-211ENST00000544336 H3BPC8 53 aa10.92□□□□□ -0.66
PDCD2-211ENST00000544336 LCE3BQ5TA77 95 aa10.92□□□□□ -0.66
PDCD2-211ENST00000544336 MT-ATP8P03928 68 aa10.83□□□□□ -0.68
PDCD2-211ENST00000544336 SCGB1A1P11684 91 aa10.77□□□□□ -0.69
PDCD2-211ENST00000544336 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
PDCD2-211ENST00000544336 ACYP2P14621 99 aa10.68□□□□□ -0.7
PDCD2-211ENST00000544336 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
PDCD2-211ENST00000544336 J3QR89 54 aa10.56□□□□□ -0.72
PDCD2-211ENST00000544336 CHKB-CPT1BH3BT56 60 aa10.52□□□□□ -0.73
PDCD2-211ENST00000544336 CAMK2N1Q7Z7J9 78 aa10.4□□□□□ -0.74
PDCD2-211ENST00000544336 K7ERU9 68 aa10.39□□□□□ -0.75
PDCD2-211ENST00000544336 KRTAP13-4Q3LI77 160 aa10.39□□□□□ -0.75
PDCD2-211ENST00000544336 KRTAP19-7Q3SYF9 63 aa10.32□□□□□ -0.76
PDCD2-211ENST00000544336 LCE5AQ5TCM9 118 aa10.32□□□□□ -0.76
PDCD2-211ENST00000544336 KRTAP4-9Q9BYQ8 210 aa10.31□□□□□ -0.76
PDCD2-211ENST00000544336 SMIM20Q8N5G0 67 aa10.29□□□□□ -0.76
PDCD2-211ENST00000544336 DSTQ03001 7570 aaKnown RBP10.28□□□□□ -0.76
PDCD2-211ENST00000544336 GPR98Q8WXG9 6306 aa10.26□□□□□ -0.77
PDCD2-211ENST00000544336 MT1EP04732 61 aa10.26□□□□□ -0.77
PDCD2-211ENST00000544336 KRTAP19-3Q7Z4W3 81 aa10.26□□□□□ -0.77
PDCD2-211ENST00000544336 SNURFQ9Y675 71 aa10.26□□□□□ -0.77
PDCD2-211ENST00000544336 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
PDCD2-211ENST00000544336 A0A0D9SG42 100 aa10.07□□□□□ -0.8
PDCD2-211ENST00000544336 CYSTM1Q9H1C7 97 aa10.07□□□□□ -0.8
PDCD2-211ENST00000544336 KRTAP19-5Q3LI72 72 aa9.99□□□□□ -0.81
PDCD2-211ENST00000544336 LCE1DQ5T752 114 aa9.99□□□□□ -0.81
PDCD2-211ENST00000544336 MT1GP13640 62 aa9.95□□□□□ -0.82
PDCD2-211ENST00000544336 SPINT4Q6UDR6 99 aa9.94□□□□□ -0.82
PDCD2-211ENST00000544336 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
PDCD2-211ENST00000544336 COA5Q86WW8 74 aa9.91□□□□□ -0.82
PDCD2-211ENST00000544336 SEC61GP60059 68 aa9.89□□□□□ -0.83
PDCD2-211ENST00000544336 SERP1Q9Y6X1 66 aa9.89□□□□□ -0.83
PDCD2-211ENST00000544336 PP632Q6XCG6 107 aa9.88□□□□□ -0.83
PDCD2-211ENST00000544336 MT4P47944 62 aa9.86□□□□□ -0.83
PDCD2-211ENST00000544336 LCE4AQ5TA78 99 aa9.82□□□□□ -0.84
PDCD2-211ENST00000544336 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
PDCD2-211ENST00000544336 MT1MQ8N339 61 aa9.81□□□□□ -0.84
PDCD2-211ENST00000544336 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
PDCD2-211ENST00000544336 A0A1B0GU33 70 aa9.77□□□□□ -0.85
PDCD2-211ENST00000544336 HMCN1Q96RW7 5635 aa9.76□□□□□ -0.85
PDCD2-211ENST00000544336 MT1LQ93083 61 aa9.74□□□□□ -0.85
PDCD2-211ENST00000544336 KRTAP4-3Q9BYR4 195 aa9.65□□□□□ -0.86
PDCD2-211ENST00000544336 C10orf95Q9H7T3 257 aa9.57□□□□□ -0.88
PDCD2-211ENST00000544336 LCE3AQ5TA76 89 aa9.56□□□□□ -0.88
PDCD2-211ENST00000544336 KRTAP5-4Q6L8H1 288 aa9.55□□□□□ -0.88
PDCD2-211ENST00000544336 AHNAK2Q8IVF2 5795 aa9.54□□□□□ -0.88
PDCD2-211ENST00000544336 COX7CP15954 63 aa9.52□□□□□ -0.89
PDCD2-211ENST00000544336 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
PDCD2-211ENST00000544336 SMIM26A0A096LP01 95 aa9.48□□□□□ -0.89
PDCD2-211ENST00000544336 A8MU10 97 aa9.48□□□□□ -0.89
PDCD2-211ENST00000544336 KRTAP5-10Q6L8G5 202 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms