RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 NCR3O14931 201 aa1.33□□□□□ -2.2
SCFD1-207ENST00000544052 DNAL4O96015 105 aa1.33□□□□□ -2.2
SCFD1-207ENST00000544052 SMIM13P0DJ93 91 aa1.33□□□□□ -2.2
SCFD1-207ENST00000544052 IFITM1P13164 125 aa1.33□□□□□ -2.2
SCFD1-207ENST00000544052 SPTSSBQ8NFR3 76 aa1.33□□□□□ -2.2
SCFD1-207ENST00000544052 KCNQ1DNQ9H478 68 aa1.33□□□□□ -2.2
SCFD1-207ENST00000544052 H3BRM9 83 aa1.32□□□□□ -2.2
SCFD1-207ENST00000544052 COX17Q14061 63 aa1.32□□□□□ -2.2
SCFD1-207ENST00000544052 TMEM170BQ5T4T1 132 aa1.32□□□□□ -2.2
SCFD1-207ENST00000544052 BAGE3Q86Y29 109 aa1.32□□□□□ -2.2
SCFD1-207ENST00000544052 SVBPQ8N300 66 aa1.32□□□□□ -2.2
SCFD1-207ENST00000544052 LINC00158P58513 81 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 COPS9Q8WXC6 57 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 SMCO4Q9NRQ5 59 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 TRAV23DV6A0A075B6W5 121 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 LINC01549A6NIU2 74 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 NPC2P61916 151 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 SPAG11AQ6PDA7 123 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 Q6ZRX8 168 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 IFI27L1Q96BM0 104 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 PMCHL2Q9BQD1 86 aa1.31□□□□□ -2.2
SCFD1-207ENST00000544052 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
SCFD1-207ENST00000544052 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
SCFD1-207ENST00000544052 SPINK1P00995 79 aa1.3□□□□□ -2.2
SCFD1-207ENST00000544052 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
SCFD1-207ENST00000544052 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
SCFD1-207ENST00000544052 ETDCA0A1B0GVM5 59 aa1.3□□□□□ -2.2
SCFD1-207ENST00000544052 APOC3P02656 99 aa1.3□□□□□ -2.2
SCFD1-207ENST00000544052 SPRR1BP22528 89 aa1.3□□□□□ -2.2
SCFD1-207ENST00000544052 C9orf92A6NGG3 77 aa1.29□□□□□ -2.2
SCFD1-207ENST00000544052 JMJD7-PLA2G4BH0Y9G9 81 aa1.29□□□□□ -2.2
SCFD1-207ENST00000544052 SSBP3-AS1Q7Z2R9 100 aa1.29□□□□□ -2.2
SCFD1-207ENST00000544052 LOC101927531A0A1B0GV80 90 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 MT-ATP8P03928 68 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 SFTA2Q6UW10 78 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 MYMXA0A1B0GTQ4 84 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 PDE6GP18545 87 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 LINC00308Q8TCZ7 52 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 PPDPFLQ8WWR9 84 aa1.28□□□□□ -2.2
SCFD1-207ENST00000544052 HCG22E2RYF7 251 aa1.27□□□□□ -2.21
SCFD1-207ENST00000544052 LEPROTL1O95214 131 aa1.27□□□□□ -2.21
SCFD1-207ENST00000544052 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
SCFD1-207ENST00000544052 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
SCFD1-207ENST00000544052 COL5A1-AS1Q5SY13 56 aa1.27□□□□□ -2.21
SCFD1-207ENST00000544052 OBSCN-AS1Q96MR7 158 aa1.27□□□□□ -2.21
SCFD1-207ENST00000544052 CCKP06307 115 aa1.27□□□□□ -2.21
SCFD1-207ENST00000544052 IGLV5-48A0A075B6I7 105 aa1.26□□□□□ -2.21
SCFD1-207ENST00000544052 IGKV3D-7A0A0C4DH55 119 aa1.26□□□□□ -2.21
SCFD1-207ENST00000544052 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
SCFD1-207ENST00000544052 PLNP26678 52 aa1.26□□□□□ -2.21
SCFD1-207ENST00000544052 C3orf79P0CE67 100 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 DMAC1Q96GE9 116 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 TEX49A0A1B0GTD5 131 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 INE1O15225 51 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 COX7BP24311 80 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 DEFB105AQ8NG35 78 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 SPANXDQ9BXN6 97 aa1.25□□□□□ -2.21
SCFD1-207ENST00000544052 TRAV13-2A0A0B4J235 113 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 ZNF815PA8K554 130 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 MT2AP02795 61 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 MT1FP04733 61 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 SMIM11BQ8TCY0 68 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 hADV29S1A0JD25 119 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 MUSTN1Q8IVN3 82 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 C20orf197Q8N268 126 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 PRO1933Q9H354 126 aa1.24□□□□□ -2.21
SCFD1-207ENST00000544052 M0R2T5 61 aa1.23□□□□□ -2.21
SCFD1-207ENST00000544052 LINC00208Q96KT6 92 aa1.23□□□□□ -2.21
SCFD1-207ENST00000544052 Q96NJ1 140 aa1.23□□□□□ -2.21
SCFD1-207ENST00000544052 NEBP20929 6669 aa1.23□□□□□ -2.21
SCFD1-207ENST00000544052 TRBV7-7A0A0K0K1E9 115 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 SPATA45Q537H7 98 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 Q6ZQY7 126 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 H3BUT2 72 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 KRTDAPP60985 99 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 LINC00575Q6W349 94 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 COX6B2Q6YFQ2 88 aa1.22□□□□□ -2.21
SCFD1-207ENST00000544052 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
SCFD1-207ENST00000544052 VAMP8Q9BV40 100 aa1.21□□□□□ -2.22
SCFD1-207ENST00000544052 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
SCFD1-207ENST00000544052 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
SCFD1-207ENST00000544052 KRTAP19-6Q3LI70 58 aa1.19□□□□□ -2.22
SCFD1-207ENST00000544052 PYY3Q5JQD4 70 aa1.19□□□□□ -2.22
SCFD1-207ENST00000544052 Q6JHZ5 121 aa1.19□□□□□ -2.22
SCFD1-207ENST00000544052 A0A1W2PPM0 123 aa1.17□□□□□ -2.22
SCFD1-207ENST00000544052 F8WEM9 126 aa1.17□□□□□ -2.22
SCFD1-207ENST00000544052 ATP5EP56381 51 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-207ENST00000544052 COX8AP10176 69 aa1.17□□□□□ -2.22
SCFD1-207ENST00000544052 Q5VV11 94 aa1.17□□□□□ -2.22
SCFD1-207ENST00000544052 LINC00472Q9H8W2 130 aa1.17□□□□□ -2.22
SCFD1-207ENST00000544052 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
SCFD1-207ENST00000544052 TRAV22A0A0B4J277 110 aa1.16□□□□□ -2.22
SCFD1-207ENST00000544052 CHKB-CPT1BH3BT56 60 aa1.16□□□□□ -2.22
SCFD1-207ENST00000544052 BVES-AS1Q5T3Y7 98 aa1.16□□□□□ -2.22
SCFD1-207ENST00000544052 KMT2DO14686 5537 aa1.15□□□□□ -2.22
SCFD1-207ENST00000544052 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
SCFD1-207ENST00000544052 TRBV7-4A0A0J9YYF1 115 aa1.14□□□□□ -2.23
SCFD1-207ENST00000544052 HIGD1BQ9P298 99 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms