RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
LDHA-218ENST00000540430 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
LDHA-218ENST00000540430 ANAPC11Q9NYG5 84 aa5.31□□□□□ -1.56
LDHA-218ENST00000540430 IGKV2D-30A0A075B6S6 120 aa5.3□□□□□ -1.56
LDHA-218ENST00000540430 A8MUU9 505 aa5.28□□□□□ -1.56
LDHA-218ENST00000540430 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
LDHA-218ENST00000540430 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
LDHA-218ENST00000540430 P0C880 135 aa5.26□□□□□ -1.57
LDHA-218ENST00000540430 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
LDHA-218ENST00000540430 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
LDHA-218ENST00000540430 H0YAA0 97 aa5.21□□□□□ -1.58
LDHA-218ENST00000540430 TNXBP22105 4242 aa5.2□□□□□ -1.58
LDHA-218ENST00000540430 LRP2P98164 4655 aa5.17□□□□□ -1.58
LDHA-218ENST00000540430 SPINK1P00995 79 aa5.16□□□□□ -1.58
LDHA-218ENST00000540430 A0A1B0GU33 70 aa5.14□□□□□ -1.59
LDHA-218ENST00000540430 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
LDHA-218ENST00000540430 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
LDHA-218ENST00000540430 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
LDHA-218ENST00000540430 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
LDHA-218ENST00000540430 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
LDHA-218ENST00000540430 KRTAP13-2Q52LG2 175 aa5.11□□□□□ -1.59
LDHA-218ENST00000540430 K7ERS5 55 aa5.11□□□□□ -1.59
LDHA-218ENST00000540430 TYMSOSQ8TAI1 123 aa5.1□□□□□ -1.59
LDHA-218ENST00000540430 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
LDHA-218ENST00000540430 C20orf166-AS1Q96NR2 134 aa5.05□□□□□ -1.6
LDHA-218ENST00000540430 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
LDHA-218ENST00000540430 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
LDHA-218ENST00000540430 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
LDHA-218ENST00000540430 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
LDHA-218ENST00000540430 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
LDHA-218ENST00000540430 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
LDHA-218ENST00000540430 LPAP08519 4548 aa4.99□□□□□ -1.61
LDHA-218ENST00000540430 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
LDHA-218ENST00000540430 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
LDHA-218ENST00000540430 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
LDHA-218ENST00000540430 TPRXLQ17RH7 258 aa4.95□□□□□ -1.62
LDHA-218ENST00000540430 MUC2Q02817 5179 aa4.91□□□□□ -1.62
LDHA-218ENST00000540430 LCE2BO14633 110 aa4.88□□□□□ -1.63
LDHA-218ENST00000540430 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
LDHA-218ENST00000540430 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
LDHA-218ENST00000540430 C9orf92A6NGG3 77 aa4.81□□□□□ -1.64
LDHA-218ENST00000540430 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
LDHA-218ENST00000540430 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
LDHA-218ENST00000540430 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
LDHA-218ENST00000540430 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
LDHA-218ENST00000540430 A0A0D9SG42 100 aa4.77□□□□□ -1.65
LDHA-218ENST00000540430 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
LDHA-218ENST00000540430 XP32Q5T750 250 aa4.77□□□□□ -1.65
LDHA-218ENST00000540430 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
LDHA-218ENST00000540430 S4R3F8 94 aa4.75□□□□□ -1.65
LDHA-218ENST00000540430 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
LDHA-218ENST00000540430 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
LDHA-218ENST00000540430 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
LDHA-218ENST00000540430 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
LDHA-218ENST00000540430 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
LDHA-218ENST00000540430 M0QZ58 72 aa4.61□□□□□ -1.67
LDHA-218ENST00000540430 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
LDHA-218ENST00000540430 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
LDHA-218ENST00000540430 KRTAP19-2Q3LHN2 52 aa4.5□□□□□ -1.69
LDHA-218ENST00000540430 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
LDHA-218ENST00000540430 FSIP2Q5CZC0 6907 aa4.48□□□□□ -1.69
LDHA-218ENST00000540430 MT1HP80294 61 aa4.47□□□□□ -1.69
LDHA-218ENST00000540430 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
LDHA-218ENST00000540430 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
LDHA-218ENST00000540430 M0R2T5 61 aa4.39□□□□□ -1.71
LDHA-218ENST00000540430 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
LDHA-218ENST00000540430 R4GN34 69 aa4.37□□□□□ -1.71
LDHA-218ENST00000540430 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
LDHA-218ENST00000540430 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
LDHA-218ENST00000540430 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
LDHA-218ENST00000540430 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
LDHA-218ENST00000540430 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
LDHA-218ENST00000540430 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
LDHA-218ENST00000540430 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
LDHA-218ENST00000540430 USH2AO75445 5202 aa4.19□□□□□ -1.74
LDHA-218ENST00000540430 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
LDHA-218ENST00000540430 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
LDHA-218ENST00000540430 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.74
LDHA-218ENST00000540430 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
LDHA-218ENST00000540430 MT2AP02795 61 aa4.15□□□□□ -1.75
LDHA-218ENST00000540430 MT1FP04733 61 aa4.11□□□□□ -1.75
LDHA-218ENST00000540430 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
LDHA-218ENST00000540430 TNP1P09430 55 aa4.09□□□□□ -1.75
LDHA-218ENST00000540430 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
LDHA-218ENST00000540430 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
LDHA-218ENST00000540430 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
LDHA-218ENST00000540430 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
LDHA-218ENST00000540430 INE1O15225 51 aa4.07□□□□□ -1.76
LDHA-218ENST00000540430 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
LDHA-218ENST00000540430 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
LDHA-218ENST00000540430 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
LDHA-218ENST00000540430 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
LDHA-218ENST00000540430 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
LDHA-218ENST00000540430 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
LDHA-218ENST00000540430 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
LDHA-218ENST00000540430 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
LDHA-218ENST00000540430 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
LDHA-218ENST00000540430 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
LDHA-218ENST00000540430 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
LDHA-218ENST00000540430 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms