RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 KLKP1Q107X0 134 aa3.81□□□□□ -1.8
SPARC-208ENST00000538026 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
SPARC-208ENST00000538026 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
SPARC-208ENST00000538026 MT1BP07438 61 aa3.79□□□□□ -1.8
SPARC-208ENST00000538026 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
SPARC-208ENST00000538026 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
SPARC-208ENST00000538026 ATOX1O00244 68 aa3.76□□□□□ -1.81
SPARC-208ENST00000538026 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
SPARC-208ENST00000538026 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
SPARC-208ENST00000538026 KMT2DO14686 5537 aa3.75□□□□□ -1.81
SPARC-208ENST00000538026 FAM236AA0A1B0GUQ0 79 aa3.74□□□□□ -1.81
SPARC-208ENST00000538026 FAM236BA0A1B0GV22 79 aa3.74□□□□□ -1.81
SPARC-208ENST00000538026 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
SPARC-208ENST00000538026 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
SPARC-208ENST00000538026 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
SPARC-208ENST00000538026 J3QR89 54 aa3.7□□□□□ -1.82
SPARC-208ENST00000538026 A8MUN3 132 aa3.69□□□□□ -1.82
SPARC-208ENST00000538026 MP68P56378 58 aa3.69□□□□□ -1.82
SPARC-208ENST00000538026 H0YAA0 97 aa3.68□□□□□ -1.82
SPARC-208ENST00000538026 NDUFC1O43677 76 aa3.68□□□□□ -1.82
SPARC-208ENST00000538026 Q5VV11 94 aa3.68□□□□□ -1.82
SPARC-208ENST00000538026 H3BPC8 53 aa3.66□□□□□ -1.82
SPARC-208ENST00000538026 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
SPARC-208ENST00000538026 IMUPQ9GZP8 106 aa3.66□□□□□ -1.82
SPARC-208ENST00000538026 NEBP20929 6669 aa3.65□□□□□ -1.83
SPARC-208ENST00000538026 ADM2Q7Z4H4 148 aa3.65□□□□□ -1.83
SPARC-208ENST00000538026 DMAC1Q96GE9 116 aa3.65□□□□□ -1.83
SPARC-208ENST00000538026 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
SPARC-208ENST00000538026 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
SPARC-208ENST00000538026 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SPARC-208ENST00000538026 A6NN06 94 aa3.63□□□□□ -1.83
SPARC-208ENST00000538026 P0C880 135 aa3.63□□□□□ -1.83
SPARC-208ENST00000538026 K7ERU9 68 aa3.62□□□□□ -1.83
SPARC-208ENST00000538026 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
SPARC-208ENST00000538026 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
SPARC-208ENST00000538026 MT1XP80297 61 aa3.56□□□□□ -1.84
SPARC-208ENST00000538026 SNURFQ9Y675 71 aa3.55□□□□□ -1.84
SPARC-208ENST00000538026 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
SPARC-208ENST00000538026 ACYP2P14621 99 aa3.52□□□□□ -1.85
SPARC-208ENST00000538026 M0QZ58 72 aa3.5□□□□□ -1.85
SPARC-208ENST00000538026 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
SPARC-208ENST00000538026 C20orf197Q8N268 126 aa3.49□□□□□ -1.85
SPARC-208ENST00000538026 SERP2Q8N6R1 65 aa3.49□□□□□ -1.85
SPARC-208ENST00000538026 R4GN34 69 aa3.49□□□□□ -1.85
SPARC-208ENST00000538026 SPANXA2-OT1Q8N9U9 137 aa3.47□□□□□ -1.85
SPARC-208ENST00000538026 PLAC4Q8WY50 150 aa3.46□□□□□ -1.86
SPARC-208ENST00000538026 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
SPARC-208ENST00000538026 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
SPARC-208ENST00000538026 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
SPARC-208ENST00000538026 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
SPARC-208ENST00000538026 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
SPARC-208ENST00000538026 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
SPARC-208ENST00000538026 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
SPARC-208ENST00000538026 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
SPARC-208ENST00000538026 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
SPARC-208ENST00000538026 COX7CP15954 63 aa3.4□□□□□ -1.87
SPARC-208ENST00000538026 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
SPARC-208ENST00000538026 SPTSSBQ8NFR3 76 aa3.4□□□□□ -1.87
SPARC-208ENST00000538026 H7BZZ5 65 aa3.38□□□□□ -1.87
SPARC-208ENST00000538026 COA5Q86WW8 74 aa3.38□□□□□ -1.87
SPARC-208ENST00000538026 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
SPARC-208ENST00000538026 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
SPARC-208ENST00000538026 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
SPARC-208ENST00000538026 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
SPARC-208ENST00000538026 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
SPARC-208ENST00000538026 SPRR2EP22531 72 aa3.29□□□□□ -1.88
SPARC-208ENST00000538026 SPRR2BP35325 72 aa3.29□□□□□ -1.88
SPARC-208ENST00000538026 SPRR2AP35326 72 aa3.29□□□□□ -1.88
SPARC-208ENST00000538026 CCDC179H3BU77 68 aa3.28□□□□□ -1.88
SPARC-208ENST00000538026 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
SPARC-208ENST00000538026 ANAPC13Q9BS18 74 aa3.25□□□□□ -1.89
SPARC-208ENST00000538026 A0A0D9SG42 100 aa3.24□□□□□ -1.89
SPARC-208ENST00000538026 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
SPARC-208ENST00000538026 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
SPARC-208ENST00000538026 A0A1B0GU33 70 aa3.23□□□□□ -1.89
SPARC-208ENST00000538026 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
SPARC-208ENST00000538026 SERP1Q9Y6X1 66 aa3.22□□□□□ -1.89
SPARC-208ENST00000538026 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
SPARC-208ENST00000538026 SEC61GP60059 68 aa3.2□□□□□ -1.9
SPARC-208ENST00000538026 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
SPARC-208ENST00000538026 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
SPARC-208ENST00000538026 A8MU10 97 aa3.18□□□□□ -1.9
SPARC-208ENST00000538026 SPRR2DP22532 72 aa3.17□□□□□ -1.9
SPARC-208ENST00000538026 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
SPARC-208ENST00000538026 A0A1B0GU69 56 aa3.15□□□□□ -1.91
SPARC-208ENST00000538026 MT1EP04732 61 aa3.14□□□□□ -1.91
SPARC-208ENST00000538026 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
SPARC-208ENST00000538026 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
SPARC-208ENST00000538026 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
SPARC-208ENST00000538026 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
SPARC-208ENST00000538026 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
SPARC-208ENST00000538026 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
SPARC-208ENST00000538026 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
SPARC-208ENST00000538026 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
SPARC-208ENST00000538026 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
SPARC-208ENST00000538026 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
SPARC-208ENST00000538026 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
SPARC-208ENST00000538026 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
SPARC-208ENST00000538026 TMEM258P61165 79 aa3.07□□□□□ -1.92
SPARC-208ENST00000538026 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms