RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 HSD52Q0P140 79 aa1.42□□□□□ -2.18
YBX3-205ENST00000536107 PMAIP1Q13794 54 aa1.42□□□□□ -2.18
YBX3-205ENST00000536107 LUZP6Q538Z0 58 aa1.42□□□□□ -2.18
YBX3-205ENST00000536107 HIST3H2BBQ8N257 126 aa1.42□□□□□ -2.18
YBX3-205ENST00000536107 MT1EP04732 61 aa1.41□□□□□ -2.18
YBX3-205ENST00000536107 MT1GP13640 62 aa1.41□□□□□ -2.18
YBX3-205ENST00000536107 Q6ZQY7 126 aa1.41□□□□□ -2.18
YBX3-205ENST00000536107 GTF2H5Q6ZYL4 71 aa1.41□□□□□ -2.18
YBX3-205ENST00000536107 SEC11CQ9BY50 192 aa1.41□□□□□ -2.18
YBX3-205ENST00000536107 A0A1B0GW54 56 aa1.4□□□□□ -2.19
YBX3-205ENST00000536107 K7ERS5 55 aa1.4□□□□□ -2.19
YBX3-205ENST00000536107 TSPEAR-AS2P59090 65 aa1.4□□□□□ -2.19
YBX3-205ENST00000536107 C9JAW5 83 aa1.39□□□□□ -2.19
YBX3-205ENST00000536107 J3QQQ9 107 aa1.39□□□□□ -2.19
YBX3-205ENST00000536107 LINC00308Q8TCZ7 52 aa1.39□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BLQ99880 126 aa1.39□□□□□ -2.19
YBX3-205ENST00000536107 hADV29S1A0JD25 119 aa1.38□□□□□ -2.19
YBX3-205ENST00000536107 SRP19P09132 144 aaKnown RBP1.38□□□□□ -2.19
YBX3-205ENST00000536107 PMCHL1Q16048 86 aa1.38□□□□□ -2.19
YBX3-205ENST00000536107 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
YBX3-205ENST00000536107 MT1MQ8N339 61 aa1.38□□□□□ -2.19
YBX3-205ENST00000536107 UQCR10Q9UDW1 63 aa1.38□□□□□ -2.19
YBX3-205ENST00000536107 TRAPPC1Q9Y5R8 145 aa1.38□□□□□ -2.19
YBX3-205ENST00000536107 LINC01546A6NGU7 62 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 TAX1BP3O14907 124 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BKO60814 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 DPM2O94777 84 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BJP06899 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 FABP4P15090 132 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BOP23527 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BBP33778 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BDP58876 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BCP62807 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST2H2BEQ16778 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BHQ93079 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 RAB37Q96AX2 223 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BNQ99877 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 HIST1H2BMQ99879 126 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 VAMP8Q9BV40 100 aa1.37□□□□□ -2.19
YBX3-205ENST00000536107 CCDC179H3BU77 68 aa1.36□□□□□ -2.19
YBX3-205ENST00000536107 K7EP34 96 aa1.36□□□□□ -2.19
YBX3-205ENST00000536107 TMEM258P61165 79 aa1.36□□□□□ -2.19
YBX3-205ENST00000536107 LINC00575Q6W349 94 aa1.36□□□□□ -2.19
YBX3-205ENST00000536107 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 K7EQZ3 153 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 IFITM1P13164 125 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 SPINT4Q6UDR6 99 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 C7orf65Q6ZTY9 151 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 ATOH7Q8N100 152 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 Q8N9L7 120 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 PPDPFLQ8WWR9 84 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 LINC00472Q9H8W2 130 aa1.35□□□□□ -2.19
YBX3-205ENST00000536107 F8W1H4 67 aa1.34□□□□□ -2.19
YBX3-205ENST00000536107 UQCRQO14949 82 aa1.34□□□□□ -2.19
YBX3-205ENST00000536107 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
YBX3-205ENST00000536107 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.34□□□□□ -2.19
YBX3-205ENST00000536107 C2orf91Q6ZV80 131 aa1.34□□□□□ -2.19
YBX3-205ENST00000536107 ANKRD29Q8N6D5 301 aa1.34□□□□□ -2.19
YBX3-205ENST00000536107 SMIM11BQ8TCY0 68 aa1.34□□□□□ -2.19
YBX3-205ENST00000536107 H3BMG7 143 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 H3BQ85 93 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 NDUFB1O75438 58 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 MT-ATP8P03928 68 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 TRGC2P03986 189 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 BVES-AS1Q5T3Y7 98 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 COPS9Q8WXC6 57 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 IFI27L1Q96BM0 104 aa1.33□□□□□ -2.2
YBX3-205ENST00000536107 A6NED7 52 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 SPATA45Q537H7 98 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 ADM2Q7Z4H4 148 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 KTN1-AS1Q86SY8 53 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 C1orf64Q8NEQ6 169 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 PMCHL2Q9BQD1 86 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 NAA38Q9BRA0 125 aaKnown RBP1.32□□□□□ -2.2
YBX3-205ENST00000536107 R4GN34 69 aa1.32□□□□□ -2.2
YBX3-205ENST00000536107 A0A1W2PPM0 123 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 SNCGO76070 127 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 FABP2P12104 132 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 LINC01545Q5VT33 79 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 C18orf32Q8TCD1 76 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 SPCS1Q9Y6A9 102 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 SERP1Q9Y6X1 66 aa1.31□□□□□ -2.2
YBX3-205ENST00000536107 A0A0B4J2C4 111 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 TRBV7-4A0A0J9YYF1 115 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 A0A1B0GU33 70 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 hDV103S1A0JD37 113 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 SYS1-DBNDD2H3BUS1 97 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 TIMM17BO60830 172 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 TRACP01848 142 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 COX7CP15954 63 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 PLNP26678 52 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 MUSTN1Q8IVN3 82 aa1.3□□□□□ -2.2
YBX3-205ENST00000536107 H3BT86 120 aa1.29□□□□□ -2.2
YBX3-205ENST00000536107 M0QZ58 72 aa1.29□□□□□ -2.2
YBX3-205ENST00000536107 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
YBX3-205ENST00000536107 HIST1H4AP62805 103 aaKnown RBP1.29□□□□□ -2.2
YBX3-205ENST00000536107 BRK1Q8WUW1 75 aa1.29□□□□□ -2.2
YBX3-205ENST00000536107 H3BPC8 53 aa1.28□□□□□ -2.2
YBX3-205ENST00000536107 ATOX1O00244 68 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms