RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 RBM12B-AS1Q9P1G2 102 aa10.55□□□□□ -0.72
PDXDC1-205ENST00000535621 RNF213Q63HN8 5207 aa10.54□□□□□ -0.72
PDXDC1-205ENST00000535621 PSPHP1O15172 72 aa10.53□□□□□ -0.72
PDXDC1-205ENST00000535621 PRO0628Q9UI54 55 aa10.5□□□□□ -0.73
PDXDC1-205ENST00000535621 H1FX-AS1Q4G0G2 97 aa10.49□□□□□ -0.73
PDXDC1-205ENST00000535621 SPTSSBQ8NFR3 76 aa10.49□□□□□ -0.73
PDXDC1-205ENST00000535621 PRR15LQ9BU68 103 aa10.48□□□□□ -0.73
PDXDC1-205ENST00000535621 LCA10Q71F78 164 aa10.46□□□□□ -0.74
PDXDC1-205ENST00000535621 S4R3F8 94 aa10.44□□□□□ -0.74
PDXDC1-205ENST00000535621 Q5VV11 94 aa10.43□□□□□ -0.74
PDXDC1-205ENST00000535621 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
PDXDC1-205ENST00000535621 BRK1Q8WUW1 75 aa10.37□□□□□ -0.75
PDXDC1-205ENST00000535621 A0A1B0GU69 56 aa10.36□□□□□ -0.75
PDXDC1-205ENST00000535621 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
PDXDC1-205ENST00000535621 FAT4Q6V0I7 4981 aa10.26□□□□□ -0.77
PDXDC1-205ENST00000535621 SEC61GP60059 68 aa10.25□□□□□ -0.77
PDXDC1-205ENST00000535621 LCE2CQ5TA81 110 aa10.19□□□□□ -0.78
PDXDC1-205ENST00000535621 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
PDXDC1-205ENST00000535621 A6NED7 52 aa10.17□□□□□ -0.78
PDXDC1-205ENST00000535621 FLGP20930 4061 aaPredicted RBP10.17□□□□□ -0.78
PDXDC1-205ENST00000535621 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
PDXDC1-205ENST00000535621 KRTAP10-6P60371 365 aaPredicted RBP10.08□□□□□ -0.8
PDXDC1-205ENST00000535621 UQCR11O14957 56 aa10.06□□□□□ -0.8
PDXDC1-205ENST00000535621 A8MU10 97 aa10.04□□□□□ -0.8
PDXDC1-205ENST00000535621 A0A1B0GU33 70 aa10.02□□□□□ -0.8
PDXDC1-205ENST00000535621 CDC42SE1Q9NRR8 79 aa10.02□□□□□ -0.81
PDXDC1-205ENST00000535621 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
PDXDC1-205ENST00000535621 H0YAA0 97 aa9.99□□□□□ -0.81
PDXDC1-205ENST00000535621 P0C880 135 aa9.99□□□□□ -0.81
PDXDC1-205ENST00000535621 MT1HP80294 61 aa9.98□□□□□ -0.81
PDXDC1-205ENST00000535621 MIR22HGQ0VDD5 57 aa9.96□□□□□ -0.81
PDXDC1-205ENST00000535621 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.81
PDXDC1-205ENST00000535621 M0R2T5 61 aa9.83□□□□□ -0.84
PDXDC1-205ENST00000535621 PMAIP1Q13794 54 aa9.82□□□□□ -0.84
PDXDC1-205ENST00000535621 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
PDXDC1-205ENST00000535621 M0QZ58 72 aa9.7□□□□□ -0.86
PDXDC1-205ENST00000535621 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
PDXDC1-205ENST00000535621 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
PDXDC1-205ENST00000535621 A6NN06 94 aa9.67□□□□□ -0.86
PDXDC1-205ENST00000535621 KTN1-AS1Q86SY8 53 aa9.63□□□□□ -0.87
PDXDC1-205ENST00000535621 R4GN34 69 aa9.63□□□□□ -0.87
PDXDC1-205ENST00000535621 A0A0D9SG42 100 aa9.62□□□□□ -0.87
PDXDC1-205ENST00000535621 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
PDXDC1-205ENST00000535621 MT2AP02795 61 aa9.55□□□□□ -0.88
PDXDC1-205ENST00000535621 MT1FP04733 61 aa9.52□□□□□ -0.89
PDXDC1-205ENST00000535621 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
PDXDC1-205ENST00000535621 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
PDXDC1-205ENST00000535621 K7ERS5 55 aa9.45□□□□□ -0.9
PDXDC1-205ENST00000535621 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
PDXDC1-205ENST00000535621 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
PDXDC1-205ENST00000535621 KRTAP12-2P59991 146 aa9.43□□□□□ -0.9
PDXDC1-205ENST00000535621 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
PDXDC1-205ENST00000535621 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
PDXDC1-205ENST00000535621 KRTAP19-1Q8IUB9 90 aa9.29□□□□□ -0.92
PDXDC1-205ENST00000535621 KRTAP9-3Q9BYQ3 159 aa9.24□□□□□ -0.93
PDXDC1-205ENST00000535621 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
PDXDC1-205ENST00000535621 ROMO1P60602 79 aa9.12□□□□□ -0.95
PDXDC1-205ENST00000535621 LCE2BO14633 110 aa9.06□□□□□ -0.96
PDXDC1-205ENST00000535621 KRTAP19-8Q3LI54 63 aa9.04□□□□□ -0.96
PDXDC1-205ENST00000535621 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
PDXDC1-205ENST00000535621 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
PDXDC1-205ENST00000535621 MT1BP07438 61 aa8.96□□□□□ -0.98
PDXDC1-205ENST00000535621 C10orf95Q9H7T3 257 aa8.93□□□□□ -0.98
PDXDC1-205ENST00000535621 USH2AO75445 5202 aa8.93□□□□□ -0.98
PDXDC1-205ENST00000535621 FSIP2Q5CZC0 6907 aa8.79□□□□□ -1
PDXDC1-205ENST00000535621 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
PDXDC1-205ENST00000535621 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
PDXDC1-205ENST00000535621 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
PDXDC1-205ENST00000535621 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
PDXDC1-205ENST00000535621 MT1XP80297 61 aa8.67□□□□□ -1.02
PDXDC1-205ENST00000535621 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
PDXDC1-205ENST00000535621 TNP1P09430 55 aa8.6□□□□□ -1.03
PDXDC1-205ENST00000535621 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
PDXDC1-205ENST00000535621 KRTAP19-6Q3LI70 58 aa8.44□□□□□ -1.06
PDXDC1-205ENST00000535621 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
PDXDC1-205ENST00000535621 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
PDXDC1-205ENST00000535621 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
PDXDC1-205ENST00000535621 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
PDXDC1-205ENST00000535621 KRTAP9-6A0A140TA67 174 aa8.32□□□□□ -1.08
PDXDC1-205ENST00000535621 FCGBPQ9Y6R7 5405 aaPredicted RBP8.31□□□□□ -1.08
PDXDC1-205ENST00000535621 LCE3AQ5TA76 89 aa8.25□□□□□ -1.09
PDXDC1-205ENST00000535621 KRTAP10-12P60413 245 aa8.24□□□□□ -1.09
PDXDC1-205ENST00000535621 KMT2DO14686 5537 aa8.2□□□□□ -1.1
PDXDC1-205ENST00000535621 KRTAP8-1Q8IUC2 63 aa8.08□□□□□ -1.12
PDXDC1-205ENST00000535621 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
PDXDC1-205ENST00000535621 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
PDXDC1-205ENST00000535621 MACF1Q9UPN3 7388 aaKnown RBP7.97□□□□□ -1.13
PDXDC1-205ENST00000535621 H3BS24 57 aa7.94□□□□□ -1.14
PDXDC1-205ENST00000535621 KRTAP15-1Q3LI76 137 aa7.93□□□□□ -1.14
PDXDC1-205ENST00000535621 KRTAP12-3P60328 96 aa7.91□□□□□ -1.14
PDXDC1-205ENST00000535621 KRTAP19-5Q3LI72 72 aa7.85□□□□□ -1.15
PDXDC1-205ENST00000535621 SYNE2Q8WXH0 6885 aaKnown RBP7.79□□□□□ -1.16
PDXDC1-205ENST00000535621 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
PDXDC1-205ENST00000535621 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
PDXDC1-205ENST00000535621 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
PDXDC1-205ENST00000535621 MUC12Q9UKN1 5478 aa7.6□□□□□ -1.19
PDXDC1-205ENST00000535621 MT1EP04732 61 aa7.58□□□□□ -1.2
PDXDC1-205ENST00000535621 SPRR2FQ96RM1 72 aa7.55□□□□□ -1.2
PDXDC1-205ENST00000535621 KRTAP9-7A8MTY7 169 aa7.54□□□□□ -1.2
PDXDC1-205ENST00000535621 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms