RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 NEBP20929 6669 aa5.85□□□□□ -1.47
CLSTN3-205ENST00000535452 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
CLSTN3-205ENST00000535452 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
CLSTN3-205ENST00000535452 ATP5EP2Q5VTU8 51 aa5.84□□□□□ -1.47
CLSTN3-205ENST00000535452 UQCRQO14949 82 aa5.83□□□□□ -1.48
CLSTN3-205ENST00000535452 A8MUN3 132 aa5.81□□□□□ -1.48
CLSTN3-205ENST00000535452 H0Y9P7 68 aa5.81□□□□□ -1.48
CLSTN3-205ENST00000535452 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
CLSTN3-205ENST00000535452 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
CLSTN3-205ENST00000535452 KRTAP3-3Q9BYR6 98 aa5.79□□□□□ -1.48
CLSTN3-205ENST00000535452 H0YAA0 97 aa5.78□□□□□ -1.48
CLSTN3-205ENST00000535452 MP68P56378 58 aa5.76□□□□□ -1.49
CLSTN3-205ENST00000535452 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
CLSTN3-205ENST00000535452 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
CLSTN3-205ENST00000535452 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
CLSTN3-205ENST00000535452 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
CLSTN3-205ENST00000535452 A0A087WVE0 104 aa5.72□□□□□ -1.49
CLSTN3-205ENST00000535452 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
CLSTN3-205ENST00000535452 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
CLSTN3-205ENST00000535452 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
CLSTN3-205ENST00000535452 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
CLSTN3-205ENST00000535452 R4GN34 69 aa5.7□□□□□ -1.5
CLSTN3-205ENST00000535452 LINC00643Q86TS7 51 aa5.65□□□□□ -1.5
CLSTN3-205ENST00000535452 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
CLSTN3-205ENST00000535452 M0QZ58 72 aa5.6□□□□□ -1.51
CLSTN3-205ENST00000535452 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
CLSTN3-205ENST00000535452 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
CLSTN3-205ENST00000535452 H3BPC8 53 aa5.58□□□□□ -1.52
CLSTN3-205ENST00000535452 SCGB1A1P11684 91 aa5.58□□□□□ -1.52
CLSTN3-205ENST00000535452 SPRR2EP22531 72 aa5.58□□□□□ -1.52
CLSTN3-205ENST00000535452 SPRR2BP35325 72 aa5.58□□□□□ -1.52
CLSTN3-205ENST00000535452 SPRR2AP35326 72 aa5.58□□□□□ -1.52
CLSTN3-205ENST00000535452 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
CLSTN3-205ENST00000535452 KMT2DO14686 5537 aa5.57□□□□□ -1.52
CLSTN3-205ENST00000535452 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
CLSTN3-205ENST00000535452 J3QR89 54 aa5.53□□□□□ -1.52
CLSTN3-205ENST00000535452 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
CLSTN3-205ENST00000535452 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
CLSTN3-205ENST00000535452 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
CLSTN3-205ENST00000535452 MT-ATP8P03928 68 aa5.5□□□□□ -1.53
CLSTN3-205ENST00000535452 MT1XP80297 61 aa5.5□□□□□ -1.53
CLSTN3-205ENST00000535452 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
CLSTN3-205ENST00000535452 P0C880 135 aa5.48□□□□□ -1.53
CLSTN3-205ENST00000535452 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
CLSTN3-205ENST00000535452 TRAV7A0A075B6U4 112 aa5.45□□□□□ -1.54
CLSTN3-205ENST00000535452 ACYP2P14621 99 aa5.45□□□□□ -1.54
CLSTN3-205ENST00000535452 CHKB-CPT1BH3BT56 60 aa5.43□□□□□ -1.54
CLSTN3-205ENST00000535452 SPRR2DP22532 72 aa5.41□□□□□ -1.54
CLSTN3-205ENST00000535452 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
CLSTN3-205ENST00000535452 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
CLSTN3-205ENST00000535452 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
CLSTN3-205ENST00000535452 A0A1B0GV90 55 aa5.36□□□□□ -1.55
CLSTN3-205ENST00000535452 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
CLSTN3-205ENST00000535452 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
CLSTN3-205ENST00000535452 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
CLSTN3-205ENST00000535452 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
CLSTN3-205ENST00000535452 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
CLSTN3-205ENST00000535452 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
CLSTN3-205ENST00000535452 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
CLSTN3-205ENST00000535452 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
CLSTN3-205ENST00000535452 SEC61GP60059 68 aa5.19□□□□□ -1.58
CLSTN3-205ENST00000535452 K7ERU9 68 aa5.18□□□□□ -1.58
CLSTN3-205ENST00000535452 SNURFQ9Y675 71 aa5.15□□□□□ -1.59
CLSTN3-205ENST00000535452 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
CLSTN3-205ENST00000535452 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
CLSTN3-205ENST00000535452 A0A0D9SG42 100 aa5.02□□□□□ -1.61
CLSTN3-205ENST00000535452 SERP2Q8N6R1 65 aa5.02□□□□□ -1.61
CLSTN3-205ENST00000535452 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
CLSTN3-205ENST00000535452 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
CLSTN3-205ENST00000535452 COA5Q86WW8 74 aa4.99□□□□□ -1.61
CLSTN3-205ENST00000535452 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
CLSTN3-205ENST00000535452 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
CLSTN3-205ENST00000535452 A0A1B0GU33 70 aa4.95□□□□□ -1.62
CLSTN3-205ENST00000535452 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
CLSTN3-205ENST00000535452 PCP4P48539 62 aa4.93□□□□□ -1.62
CLSTN3-205ENST00000535452 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
CLSTN3-205ENST00000535452 MT1EP04732 61 aa4.91□□□□□ -1.62
CLSTN3-205ENST00000535452 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
CLSTN3-205ENST00000535452 CYSTM1Q9H1C7 97 aa4.91□□□□□ -1.62
CLSTN3-205ENST00000535452 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
CLSTN3-205ENST00000535452 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
CLSTN3-205ENST00000535452 SMIM26A0A096LP01 95 aa4.88□□□□□ -1.63
CLSTN3-205ENST00000535452 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
CLSTN3-205ENST00000535452 A0A1B0GU69 56 aa4.85□□□□□ -1.63
CLSTN3-205ENST00000535452 MT1GP13640 62 aa4.85□□□□□ -1.63
CLSTN3-205ENST00000535452 COX7CP15954 63 aa4.81□□□□□ -1.64
CLSTN3-205ENST00000535452 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
CLSTN3-205ENST00000535452 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CLSTN3-205ENST00000535452 TNP1P09430 55 aa4.78□□□□□ -1.64
CLSTN3-205ENST00000535452 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
CLSTN3-205ENST00000535452 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
CLSTN3-205ENST00000535452 PRR15LQ9BU68 103 aa4.75□□□□□ -1.65
CLSTN3-205ENST00000535452 MT4P47944 62 aa4.72□□□□□ -1.65
CLSTN3-205ENST00000535452 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
CLSTN3-205ENST00000535452 H7BZZ5 65 aa4.71□□□□□ -1.66
CLSTN3-205ENST00000535452 MT1MQ8N339 61 aa4.7□□□□□ -1.66
CLSTN3-205ENST00000535452 MT1LQ93083 61 aa4.67□□□□□ -1.66
CLSTN3-205ENST00000535452 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
CLSTN3-205ENST00000535452 A8MU10 97 aa4.66□□□□□ -1.66
CLSTN3-205ENST00000535452 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms