RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 NDUFC1O43677 76 aa7.05□□□□□ -1.28
UBXN1-217ENST00000534176 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
UBXN1-217ENST00000534176 H3BPC8 53 aa7.04□□□□□ -1.28
UBXN1-217ENST00000534176 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
UBXN1-217ENST00000534176 IMUPQ9GZP8 106 aa7.04□□□□□ -1.28
UBXN1-217ENST00000534176 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
UBXN1-217ENST00000534176 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
UBXN1-217ENST00000534176 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
UBXN1-217ENST00000534176 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
UBXN1-217ENST00000534176 H0YAA0 97 aa7□□□□□ -1.29
UBXN1-217ENST00000534176 Q5VV11 94 aa6.99□□□□□ -1.29
UBXN1-217ENST00000534176 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
UBXN1-217ENST00000534176 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
UBXN1-217ENST00000534176 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
UBXN1-217ENST00000534176 K7ERU9 68 aa6.89□□□□□ -1.31
UBXN1-217ENST00000534176 SMIM20Q8N5G0 67 aa6.88□□□□□ -1.31
UBXN1-217ENST00000534176 A6NN06 94 aa6.87□□□□□ -1.31
UBXN1-217ENST00000534176 MT1BP07438 61 aa6.86□□□□□ -1.31
UBXN1-217ENST00000534176 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
UBXN1-217ENST00000534176 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
UBXN1-217ENST00000534176 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
UBXN1-217ENST00000534176 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
UBXN1-217ENST00000534176 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
UBXN1-217ENST00000534176 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
UBXN1-217ENST00000534176 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
UBXN1-217ENST00000534176 ACYP2P14621 99 aa6.74□□□□□ -1.33
UBXN1-217ENST00000534176 MT-ATP8P03928 68 aa6.73□□□□□ -1.33
UBXN1-217ENST00000534176 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
UBXN1-217ENST00000534176 R4GN34 69 aa6.71□□□□□ -1.34
UBXN1-217ENST00000534176 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
UBXN1-217ENST00000534176 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
UBXN1-217ENST00000534176 CHKB-CPT1BH3BT56 60 aa6.6□□□□□ -1.35
UBXN1-217ENST00000534176 M0QZ58 72 aa6.6□□□□□ -1.35
UBXN1-217ENST00000534176 P0C880 135 aa6.6□□□□□ -1.35
UBXN1-217ENST00000534176 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.35
UBXN1-217ENST00000534176 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
UBXN1-217ENST00000534176 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
UBXN1-217ENST00000534176 SNURFQ9Y675 71 aa6.53□□□□□ -1.36
UBXN1-217ENST00000534176 NEBP20929 6669 aa6.5□□□□□ -1.37
UBXN1-217ENST00000534176 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
UBXN1-217ENST00000534176 MT1XP80297 61 aa6.46□□□□□ -1.38
UBXN1-217ENST00000534176 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
UBXN1-217ENST00000534176 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
UBXN1-217ENST00000534176 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
UBXN1-217ENST00000534176 COX7CP15954 63 aa6.35□□□□□ -1.39
UBXN1-217ENST00000534176 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
UBXN1-217ENST00000534176 SEC61GP60059 68 aa6.32□□□□□ -1.4
UBXN1-217ENST00000534176 COA5Q86WW8 74 aa6.3□□□□□ -1.4
UBXN1-217ENST00000534176 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
UBXN1-217ENST00000534176 KMT2DO14686 5537 aa6.29□□□□□ -1.4
UBXN1-217ENST00000534176 SERP1Q9Y6X1 66 aa6.28□□□□□ -1.4
UBXN1-217ENST00000534176 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
UBXN1-217ENST00000534176 H7BZZ5 65 aa6.22□□□□□ -1.41
UBXN1-217ENST00000534176 MDN1Q9NU22 5596 aa6.21□□□□□ -1.41
UBXN1-217ENST00000534176 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
UBXN1-217ENST00000534176 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
UBXN1-217ENST00000534176 SPRR2EP22531 72 aa6.16□□□□□ -1.42
UBXN1-217ENST00000534176 SPRR2BP35325 72 aa6.16□□□□□ -1.42
UBXN1-217ENST00000534176 SPRR2AP35326 72 aa6.16□□□□□ -1.42
UBXN1-217ENST00000534176 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
UBXN1-217ENST00000534176 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
UBXN1-217ENST00000534176 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
UBXN1-217ENST00000534176 A0A1B0GU33 70 aa6.11□□□□□ -1.43
UBXN1-217ENST00000534176 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
UBXN1-217ENST00000534176 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
UBXN1-217ENST00000534176 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
UBXN1-217ENST00000534176 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
UBXN1-217ENST00000534176 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
UBXN1-217ENST00000534176 CYSTM1Q9H1C7 97 aa6.07□□□□□ -1.44
UBXN1-217ENST00000534176 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
UBXN1-217ENST00000534176 A0A1B0GU69 56 aa6.05□□□□□ -1.44
UBXN1-217ENST00000534176 A0A0D9SG42 100 aa6.02□□□□□ -1.45
UBXN1-217ENST00000534176 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
UBXN1-217ENST00000534176 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
UBXN1-217ENST00000534176 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
UBXN1-217ENST00000534176 SPRR2DP22532 72 aa5.97□□□□□ -1.45
UBXN1-217ENST00000534176 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
UBXN1-217ENST00000534176 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
UBXN1-217ENST00000534176 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
UBXN1-217ENST00000534176 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
UBXN1-217ENST00000534176 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
UBXN1-217ENST00000534176 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
UBXN1-217ENST00000534176 TMEM258P61165 79 aa5.86□□□□□ -1.47
UBXN1-217ENST00000534176 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
UBXN1-217ENST00000534176 LINC01558Q9Y6Z2 57 aa5.81□□□□□ -1.48
UBXN1-217ENST00000534176 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
UBXN1-217ENST00000534176 A8MU10 97 aa5.76□□□□□ -1.49
UBXN1-217ENST00000534176 MT1EP04732 61 aa5.74□□□□□ -1.49
UBXN1-217ENST00000534176 UQCR11O14957 56 aa5.73□□□□□ -1.49
UBXN1-217ENST00000534176 TNP1P09430 55 aa5.73□□□□□ -1.49
UBXN1-217ENST00000534176 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
UBXN1-217ENST00000534176 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
UBXN1-217ENST00000534176 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
UBXN1-217ENST00000534176 MT1GP13640 62 aa5.64□□□□□ -1.51
UBXN1-217ENST00000534176 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
UBXN1-217ENST00000534176 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
UBXN1-217ENST00000534176 V9GYY9 64 aa5.62□□□□□ -1.51
UBXN1-217ENST00000534176 K7ERS5 55 aa5.56□□□□□ -1.52
UBXN1-217ENST00000534176 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
UBXN1-217ENST00000534176 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms