RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
PCF11-206ENST00000533018 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
PCF11-206ENST00000533018 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
PCF11-206ENST00000533018 MDN1Q9NU22 5596 aa7.76□□□□□ -1.17
PCF11-206ENST00000533018 KMT2DO14686 5537 aa7.75□□□□□ -1.17
PCF11-206ENST00000533018 NDUFC1O43677 76 aa7.74□□□□□ -1.17
PCF11-206ENST00000533018 HIST1H4AP62805 103 aaKnown RBP7.72□□□□□ -1.17
PCF11-206ENST00000533018 H0Y9P7 68 aa7.7□□□□□ -1.18
PCF11-206ENST00000533018 KRTAP20-1Q3LI63 56 aa7.7□□□□□ -1.18
PCF11-206ENST00000533018 KRTAP5-9P26371 169 aa7.69□□□□□ -1.18
PCF11-206ENST00000533018 ATOX1O00244 68 aa7.68□□□□□ -1.18
PCF11-206ENST00000533018 UQCRQO14949 82 aa7.68□□□□□ -1.18
PCF11-206ENST00000533018 ACYP1P07311 99 aa7.68□□□□□ -1.18
PCF11-206ENST00000533018 PCP4L1A6NKN8 68 aa7.67□□□□□ -1.18
PCF11-206ENST00000533018 H0YAA0 97 aa7.65□□□□□ -1.18
PCF11-206ENST00000533018 ATP5EP2Q5VTU8 51 aa7.65□□□□□ -1.18
PCF11-206ENST00000533018 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
PCF11-206ENST00000533018 A8MUN3 132 aa7.6□□□□□ -1.19
PCF11-206ENST00000533018 FAM240AA0A1B0GVK7 77 aa7.58□□□□□ -1.2
PCF11-206ENST00000533018 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
PCF11-206ENST00000533018 LINC00208Q96KT6 92 aa7.56□□□□□ -1.2
PCF11-206ENST00000533018 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
PCF11-206ENST00000533018 MP68P56378 58 aa7.5□□□□□ -1.21
PCF11-206ENST00000533018 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
PCF11-206ENST00000533018 LINC00643Q86TS7 51 aa7.48□□□□□ -1.21
PCF11-206ENST00000533018 R4GN34 69 aa7.48□□□□□ -1.21
PCF11-206ENST00000533018 MT1XP80297 61 aa7.46□□□□□ -1.22
PCF11-206ENST00000533018 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
PCF11-206ENST00000533018 SPRR2EP22531 72 aa7.44□□□□□ -1.22
PCF11-206ENST00000533018 SPRR2BP35325 72 aa7.44□□□□□ -1.22
PCF11-206ENST00000533018 SPRR2AP35326 72 aa7.44□□□□□ -1.22
PCF11-206ENST00000533018 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
PCF11-206ENST00000533018 C20orf197Q8N268 126 aa7.42□□□□□ -1.22
PCF11-206ENST00000533018 KRTAP8-1Q8IUC2 63 aa7.41□□□□□ -1.22
PCF11-206ENST00000533018 OCR1Q9BZK8 76 aa7.41□□□□□ -1.22
PCF11-206ENST00000533018 M0QZ58 72 aa7.4□□□□□ -1.22
PCF11-206ENST00000533018 P0C880 135 aa7.4□□□□□ -1.22
PCF11-206ENST00000533018 LINC01554Q52M75 96 aa7.35□□□□□ -1.23
PCF11-206ENST00000533018 H3BPC8 53 aa7.31□□□□□ -1.24
PCF11-206ENST00000533018 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
PCF11-206ENST00000533018 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
PCF11-206ENST00000533018 SCGB1A1P11684 91 aa7.27□□□□□ -1.25
PCF11-206ENST00000533018 LCE1AQ5T7P2 110 aa7.25□□□□□ -1.25
PCF11-206ENST00000533018 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
PCF11-206ENST00000533018 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
PCF11-206ENST00000533018 A0A1B0GV90 55 aa7.19□□□□□ -1.26
PCF11-206ENST00000533018 SPRR2DP22532 72 aa7.19□□□□□ -1.26
PCF11-206ENST00000533018 KRTAP2-2Q9BYT5 123 aa7.19□□□□□ -1.26
PCF11-206ENST00000533018 KRTAP2-1Q9BYU5 128 aa7.19□□□□□ -1.26
PCF11-206ENST00000533018 MT-ATP8P03928 68 aa7.17□□□□□ -1.26
PCF11-206ENST00000533018 TRAV7A0A075B6U4 112 aa7.16□□□□□ -1.26
PCF11-206ENST00000533018 J3QR89 54 aa7.16□□□□□ -1.26
PCF11-206ENST00000533018 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.26
PCF11-206ENST00000533018 ACYP2P14621 99 aa7.14□□□□□ -1.27
PCF11-206ENST00000533018 SPTSSBQ8NFR3 76 aa7.11□□□□□ -1.27
PCF11-206ENST00000533018 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
PCF11-206ENST00000533018 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
PCF11-206ENST00000533018 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
PCF11-206ENST00000533018 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
PCF11-206ENST00000533018 LCE3BQ5TA77 95 aa7□□□□□ -1.29
PCF11-206ENST00000533018 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
PCF11-206ENST00000533018 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
PCF11-206ENST00000533018 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
PCF11-206ENST00000533018 DSTQ03001 7570 aaKnown RBP6.86□□□□□ -1.31
PCF11-206ENST00000533018 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
PCF11-206ENST00000533018 K7ERU9 68 aa6.77□□□□□ -1.33
PCF11-206ENST00000533018 SPANXA2-OT1Q8N9U9 137 aa6.77□□□□□ -1.33
PCF11-206ENST00000533018 GPR98Q8WXG9 6306 aa6.69□□□□□ -1.34
PCF11-206ENST00000533018 A0A0D9SG42 100 aa6.67□□□□□ -1.34
PCF11-206ENST00000533018 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
PCF11-206ENST00000533018 SEC61GP60059 68 aa6.66□□□□□ -1.34
PCF11-206ENST00000533018 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
PCF11-206ENST00000533018 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
PCF11-206ENST00000533018 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
PCF11-206ENST00000533018 MT1EP04732 61 aa6.63□□□□□ -1.35
PCF11-206ENST00000533018 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
PCF11-206ENST00000533018 COA5Q86WW8 74 aa6.63□□□□□ -1.35
PCF11-206ENST00000533018 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
PCF11-206ENST00000533018 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
PCF11-206ENST00000533018 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
PCF11-206ENST00000533018 A0A1B0GU33 70 aa6.53□□□□□ -1.36
PCF11-206ENST00000533018 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
PCF11-206ENST00000533018 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
PCF11-206ENST00000533018 MT1GP13640 62 aa6.45□□□□□ -1.38
PCF11-206ENST00000533018 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
PCF11-206ENST00000533018 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
PCF11-206ENST00000533018 COX7CP15954 63 aa6.37□□□□□ -1.39
PCF11-206ENST00000533018 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
PCF11-206ENST00000533018 HMCN1Q96RW7 5635 aa6.35□□□□□ -1.39
PCF11-206ENST00000533018 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
PCF11-206ENST00000533018 MT1MQ8N339 61 aa6.34□□□□□ -1.39
PCF11-206ENST00000533018 A0A1B0GU69 56 aa6.33□□□□□ -1.4
PCF11-206ENST00000533018 H7BZZ5 65 aa6.32□□□□□ -1.4
PCF11-206ENST00000533018 MT4P47944 62 aa6.32□□□□□ -1.4
PCF11-206ENST00000533018 MT1LQ93083 61 aa6.31□□□□□ -1.4
PCF11-206ENST00000533018 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
PCF11-206ENST00000533018 A8MU10 97 aa6.29□□□□□ -1.4
PCF11-206ENST00000533018 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
PCF11-206ENST00000533018 TNP1P09430 55 aa6.25□□□□□ -1.41
PCF11-206ENST00000533018 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms