RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
FDFT1-219ENST00000531249 RBM12B-AS1Q9P1G2 102 aa6.9□□□□□ -1.3
FDFT1-219ENST00000531249 MT1HP80294 61 aa6.89□□□□□ -1.31
FDFT1-219ENST00000531249 C7orf65Q6ZTY9 151 aa6.89□□□□□ -1.31
FDFT1-219ENST00000531249 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
FDFT1-219ENST00000531249 PRO0628Q9UI54 55 aa6.85□□□□□ -1.31
FDFT1-219ENST00000531249 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
FDFT1-219ENST00000531249 A8MUN3 132 aa6.84□□□□□ -1.31
FDFT1-219ENST00000531249 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
FDFT1-219ENST00000531249 PSPHP1O15172 72 aa6.83□□□□□ -1.32
FDFT1-219ENST00000531249 M0R2T5 61 aa6.82□□□□□ -1.32
FDFT1-219ENST00000531249 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
FDFT1-219ENST00000531249 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
FDFT1-219ENST00000531249 Q5VV11 94 aa6.79□□□□□ -1.32
FDFT1-219ENST00000531249 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
FDFT1-219ENST00000531249 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
FDFT1-219ENST00000531249 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
FDFT1-219ENST00000531249 A6NED7 52 aa6.68□□□□□ -1.34
FDFT1-219ENST00000531249 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
FDFT1-219ENST00000531249 A0A1B0GU69 56 aa6.65□□□□□ -1.34
FDFT1-219ENST00000531249 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
FDFT1-219ENST00000531249 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
FDFT1-219ENST00000531249 SEC61GP60059 68 aa6.6□□□□□ -1.35
FDFT1-219ENST00000531249 S4R3F8 94 aa6.56□□□□□ -1.36
FDFT1-219ENST00000531249 LCA10Q71F78 164 aa6.55□□□□□ -1.36
FDFT1-219ENST00000531249 KRTAP9-8Q9BYQ0 159 aa6.55□□□□□ -1.36
FDFT1-219ENST00000531249 UQCR11O14957 56 aa6.53□□□□□ -1.36
FDFT1-219ENST00000531249 MT2AP02795 61 aa6.51□□□□□ -1.37
FDFT1-219ENST00000531249 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
FDFT1-219ENST00000531249 SPATA8Q6RVD6 105 aa6.48□□□□□ -1.37
FDFT1-219ENST00000531249 LCE2DQ5TA82 110 aaPredicted RBP6.47□□□□□ -1.37
FDFT1-219ENST00000531249 MT1FP04733 61 aa6.46□□□□□ -1.38
FDFT1-219ENST00000531249 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
FDFT1-219ENST00000531249 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
FDFT1-219ENST00000531249 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
FDFT1-219ENST00000531249 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
FDFT1-219ENST00000531249 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
FDFT1-219ENST00000531249 A8MU10 97 aa6.43□□□□□ -1.38
FDFT1-219ENST00000531249 A0A1B0GU33 70 aa6.36□□□□□ -1.39
FDFT1-219ENST00000531249 A6NN06 94 aa6.36□□□□□ -1.39
FDFT1-219ENST00000531249 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
FDFT1-219ENST00000531249 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
FDFT1-219ENST00000531249 LCE2BO14633 110 aa6.25□□□□□ -1.41
FDFT1-219ENST00000531249 H0YAA0 97 aa6.23□□□□□ -1.41
FDFT1-219ENST00000531249 K7ERS5 55 aa6.21□□□□□ -1.42
FDFT1-219ENST00000531249 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
FDFT1-219ENST00000531249 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
FDFT1-219ENST00000531249 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
FDFT1-219ENST00000531249 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
FDFT1-219ENST00000531249 USH2AO75445 5202 aa6.17□□□□□ -1.42
FDFT1-219ENST00000531249 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
FDFT1-219ENST00000531249 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
FDFT1-219ENST00000531249 P0C880 135 aa6.11□□□□□ -1.43
FDFT1-219ENST00000531249 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
FDFT1-219ENST00000531249 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
FDFT1-219ENST00000531249 M0QZ58 72 aa6.07□□□□□ -1.44
FDFT1-219ENST00000531249 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
FDFT1-219ENST00000531249 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
FDFT1-219ENST00000531249 R4GN34 69 aa6.01□□□□□ -1.45
FDFT1-219ENST00000531249 MT1BP07438 61 aa6□□□□□ -1.45
FDFT1-219ENST00000531249 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
FDFT1-219ENST00000531249 A0A0D9SG42 100 aa5.97□□□□□ -1.45
FDFT1-219ENST00000531249 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
FDFT1-219ENST00000531249 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
FDFT1-219ENST00000531249 ROMO1P60602 79 aa5.92□□□□□ -1.46
FDFT1-219ENST00000531249 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
FDFT1-219ENST00000531249 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
FDFT1-219ENST00000531249 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
FDFT1-219ENST00000531249 SPINT4Q6UDR6 99 aa5.85□□□□□ -1.47
FDFT1-219ENST00000531249 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
FDFT1-219ENST00000531249 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
FDFT1-219ENST00000531249 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
FDFT1-219ENST00000531249 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
FDFT1-219ENST00000531249 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
FDFT1-219ENST00000531249 MT1XP80297 61 aa5.7□□□□□ -1.5
FDFT1-219ENST00000531249 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
FDFT1-219ENST00000531249 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
FDFT1-219ENST00000531249 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
FDFT1-219ENST00000531249 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
FDFT1-219ENST00000531249 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
FDFT1-219ENST00000531249 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
FDFT1-219ENST00000531249 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
FDFT1-219ENST00000531249 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
FDFT1-219ENST00000531249 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
FDFT1-219ENST00000531249 KMT2DO14686 5537 aa5.41□□□□□ -1.54
FDFT1-219ENST00000531249 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
FDFT1-219ENST00000531249 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
FDFT1-219ENST00000531249 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
FDFT1-219ENST00000531249 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
FDFT1-219ENST00000531249 TNP1P09430 55 aa5.38□□□□□ -1.55
FDFT1-219ENST00000531249 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
FDFT1-219ENST00000531249 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
FDFT1-219ENST00000531249 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
FDFT1-219ENST00000531249 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
FDFT1-219ENST00000531249 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
FDFT1-219ENST00000531249 SPRR2EP22531 72 aa5.14□□□□□ -1.59
FDFT1-219ENST00000531249 SPRR2BP35325 72 aa5.14□□□□□ -1.59
FDFT1-219ENST00000531249 SPRR2AP35326 72 aa5.14□□□□□ -1.59
FDFT1-219ENST00000531249 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
FDFT1-219ENST00000531249 NEBP20929 6669 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms