RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
CAPN1-221ENST00000531068 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
CAPN1-221ENST00000531068 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
CAPN1-221ENST00000531068 ACYP2P14621 99 aa5.64□□□□□ -1.51
CAPN1-221ENST00000531068 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
CAPN1-221ENST00000531068 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
CAPN1-221ENST00000531068 HRES1P13985 223 aa5.61□□□□□ -1.51
CAPN1-221ENST00000531068 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
CAPN1-221ENST00000531068 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
CAPN1-221ENST00000531068 RBM12B-AS1Q9P1G2 102 aa5.58□□□□□ -1.52
CAPN1-221ENST00000531068 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
CAPN1-221ENST00000531068 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
CAPN1-221ENST00000531068 A8MUN3 132 aa5.55□□□□□ -1.52
CAPN1-221ENST00000531068 Q5VV11 94 aa5.54□□□□□ -1.52
CAPN1-221ENST00000531068 C7orf65Q6ZTY9 151 aa5.54□□□□□ -1.52
CAPN1-221ENST00000531068 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
CAPN1-221ENST00000531068 PSPHP1O15172 72 aa5.51□□□□□ -1.53
CAPN1-221ENST00000531068 SPINK7P58062 85 aa5.5□□□□□ -1.53
CAPN1-221ENST00000531068 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
CAPN1-221ENST00000531068 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
CAPN1-221ENST00000531068 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
CAPN1-221ENST00000531068 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.54
CAPN1-221ENST00000531068 SPTSSBQ8NFR3 76 aa5.42□□□□□ -1.54
CAPN1-221ENST00000531068 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
CAPN1-221ENST00000531068 A6NED7 52 aa5.39□□□□□ -1.55
CAPN1-221ENST00000531068 MT2AP02795 61 aa5.38□□□□□ -1.55
CAPN1-221ENST00000531068 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
CAPN1-221ENST00000531068 A0A1B0GU69 56 aa5.36□□□□□ -1.55
CAPN1-221ENST00000531068 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
CAPN1-221ENST00000531068 LCA10Q71F78 164 aa5.36□□□□□ -1.55
CAPN1-221ENST00000531068 MT1FP04733 61 aa5.33□□□□□ -1.56
CAPN1-221ENST00000531068 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
CAPN1-221ENST00000531068 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
CAPN1-221ENST00000531068 UQCR11O14957 56 aa5.29□□□□□ -1.56
CAPN1-221ENST00000531068 SEC61GP60059 68 aa5.29□□□□□ -1.56
CAPN1-221ENST00000531068 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
CAPN1-221ENST00000531068 USH2AO75445 5202 aa5.28□□□□□ -1.56
CAPN1-221ENST00000531068 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
CAPN1-221ENST00000531068 LCE2BO14633 110 aa5.25□□□□□ -1.57
CAPN1-221ENST00000531068 A8MU10 97 aa5.23□□□□□ -1.57
CAPN1-221ENST00000531068 A6NN06 94 aa5.22□□□□□ -1.57
CAPN1-221ENST00000531068 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
CAPN1-221ENST00000531068 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
CAPN1-221ENST00000531068 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
CAPN1-221ENST00000531068 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
CAPN1-221ENST00000531068 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
CAPN1-221ENST00000531068 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
CAPN1-221ENST00000531068 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
CAPN1-221ENST00000531068 A0A1B0GU33 70 aa5.13□□□□□ -1.59
CAPN1-221ENST00000531068 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
CAPN1-221ENST00000531068 S4R3F8 94 aa5.11□□□□□ -1.59
CAPN1-221ENST00000531068 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
CAPN1-221ENST00000531068 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
CAPN1-221ENST00000531068 H0YAA0 97 aa5.05□□□□□ -1.6
CAPN1-221ENST00000531068 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
CAPN1-221ENST00000531068 MACF1Q9UPN3 7388 aaKnown RBP5□□□□□ -1.61
CAPN1-221ENST00000531068 K7ERS5 55 aa4.98□□□□□ -1.61
CAPN1-221ENST00000531068 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
CAPN1-221ENST00000531068 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
CAPN1-221ENST00000531068 M0QZ58 72 aa4.93□□□□□ -1.62
CAPN1-221ENST00000531068 CRIPTQ9P021 101 aa4.93□□□□□ -1.62
CAPN1-221ENST00000531068 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
CAPN1-221ENST00000531068 MT1BP07438 61 aa4.89□□□□□ -1.63
CAPN1-221ENST00000531068 P0C880 135 aa4.89□□□□□ -1.63
CAPN1-221ENST00000531068 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
CAPN1-221ENST00000531068 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
CAPN1-221ENST00000531068 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
CAPN1-221ENST00000531068 KRTAP10-5P60370 271 aa4.8□□□□□ -1.64
CAPN1-221ENST00000531068 ROMO1P60602 79 aa4.8□□□□□ -1.64
CAPN1-221ENST00000531068 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
CAPN1-221ENST00000531068 A0A0D9SG42 100 aa4.75□□□□□ -1.65
CAPN1-221ENST00000531068 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
CAPN1-221ENST00000531068 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
CAPN1-221ENST00000531068 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
CAPN1-221ENST00000531068 R4GN34 69 aa4.71□□□□□ -1.66
CAPN1-221ENST00000531068 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
CAPN1-221ENST00000531068 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
CAPN1-221ENST00000531068 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
CAPN1-221ENST00000531068 NEBP20929 6669 aa4.68□□□□□ -1.66
CAPN1-221ENST00000531068 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
CAPN1-221ENST00000531068 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CAPN1-221ENST00000531068 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
CAPN1-221ENST00000531068 MT1XP80297 61 aa4.59□□□□□ -1.67
CAPN1-221ENST00000531068 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
CAPN1-221ENST00000531068 KMT2DO14686 5537 aa4.56□□□□□ -1.68
CAPN1-221ENST00000531068 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
CAPN1-221ENST00000531068 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
CAPN1-221ENST00000531068 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
CAPN1-221ENST00000531068 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CAPN1-221ENST00000531068 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
CAPN1-221ENST00000531068 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
CAPN1-221ENST00000531068 SPRR2EP22531 72 aa4.42□□□□□ -1.7
CAPN1-221ENST00000531068 SPRR2BP35325 72 aa4.42□□□□□ -1.7
CAPN1-221ENST00000531068 SPRR2AP35326 72 aa4.42□□□□□ -1.7
CAPN1-221ENST00000531068 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
CAPN1-221ENST00000531068 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
CAPN1-221ENST00000531068 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
CAPN1-221ENST00000531068 KRTAP4-8A0A0G2JLE6 195 aa4.38□□□□□ -1.71
CAPN1-221ENST00000531068 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
CAPN1-221ENST00000531068 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms