RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	C1orf64	Q8NEQ6	169 aa		6.95	□□□□□ -1.3
TM9SF1-209	ENST00000530468	KRTAP20-1	Q3LI63	56 aa		6.93	□□□□□ -1.3
TM9SF1-209	ENST00000530468	LINC00643	Q86TS7	51 aa		6.93	□□□□□ -1.3
TM9SF1-209	ENST00000530468	KLKP1	Q107X0	134 aa		6.92	□□□□□ -1.3
TM9SF1-209	ENST00000530468	KRTAP5-9	P26371	169 aa		6.9	□□□□□ -1.3
TM9SF1-209	ENST00000530468	TRAV22	A0A0B4J277	110 aa		6.86	□□□□□ -1.31
TM9SF1-209	ENST00000530468	UQCRQ	O14949	82 aa		6.85	□□□□□ -1.31
TM9SF1-209	ENST00000530468	ATOX1	O00244	68 aa		6.84	□□□□□ -1.31
TM9SF1-209	ENST00000530468	LOC101927531	A0A1B0GV80	90 aa		6.83	□□□□□ -1.32
TM9SF1-209	ENST00000530468	CRIPT	Q9P021	101 aa		6.83	□□□□□ -1.32
TM9SF1-209	ENST00000530468	IMUP	Q9GZP8	106 aa		6.82	□□□□□ -1.32
TM9SF1-209	ENST00000530468	KRTAP3-3	Q9BYR6	98 aa		6.81	□□□□□ -1.32
TM9SF1-209	ENST00000530468	KMT2D	O14686	5537 aa		6.79	□□□□□ -1.32
TM9SF1-209	ENST00000530468	CYP4F30P	Q9H0H9	118 aa		6.79	□□□□□ -1.32
TM9SF1-209	ENST00000530468		H0Y9P7	68 aa		6.77	□□□□□ -1.33
TM9SF1-209	ENST00000530468	MDN1	Q9NU22	5596 aa		6.76	□□□□□ -1.33
TM9SF1-209	ENST00000530468		A0A087WVE0	104 aa		6.76	□□□□□ -1.33
TM9SF1-209	ENST00000530468	MP68	P56378	58 aa		6.75	□□□□□ -1.33
TM9SF1-209	ENST00000530468		K7ERU9	68 aa		6.73	□□□□□ -1.33
TM9SF1-209	ENST00000530468	SCGB1A1	P11684	91 aa		6.73	□□□□□ -1.33
TM9SF1-209	ENST00000530468	KRTAP2-3	P0C7H8	128 aa		6.68	□□□□□ -1.34
TM9SF1-209	ENST00000530468	LINC00208	Q96KT6	92 aa		6.68	□□□□□ -1.34
TM9SF1-209	ENST00000530468	KRTAP2-4	Q9BYR9	128 aa		6.68	□□□□□ -1.34
TM9SF1-209	ENST00000530468		H0YAA0	97 aa		6.67	□□□□□ -1.34
TM9SF1-209	ENST00000530468		H3BPC8	53 aa		6.65	□□□□□ -1.34
TM9SF1-209	ENST00000530468	OCR1	Q9BZK8	76 aa		6.65	□□□□□ -1.34
TM9SF1-209	ENST00000530468		A8MUN3	132 aa		6.64	□□□□□ -1.35
TM9SF1-209	ENST00000530468	NDUFC1	O43677	76 aa		6.63	□□□□□ -1.35
TM9SF1-209	ENST00000530468	PRO2289	Q9P1D8	64 aa		6.63	□□□□□ -1.35
TM9SF1-209	ENST00000530468	SPRR2F	Q96RM1	72 aa		6.62	□□□□□ -1.35
TM9SF1-209	ENST00000530468	SMIM20	Q8N5G0	67 aa		6.6	□□□□□ -1.35
TM9SF1-209	ENST00000530468	SPRR2E	P22531	72 aa		6.59	□□□□□ -1.35
TM9SF1-209	ENST00000530468	SPRR2B	P35325	72 aa		6.59	□□□□□ -1.35
TM9SF1-209	ENST00000530468	SPRR2A	P35326	72 aa		6.59	□□□□□ -1.35
TM9SF1-209	ENST00000530468	ADM2	Q7Z4H4	148 aa		6.55	□□□□□ -1.36
TM9SF1-209	ENST00000530468	MT1X	P80297	61 aa		6.54	□□□□□ -1.36
TM9SF1-209	ENST00000530468	KRTAP8-1	Q8IUC2	63 aa		6.52	□□□□□ -1.37
TM9SF1-209	ENST00000530468	PLAC4	Q8WY50	150 aa		6.52	□□□□□ -1.37
TM9SF1-209	ENST00000530468	MT-ATP8	P03928	68 aa		6.51	□□□□□ -1.37
TM9SF1-209	ENST00000530468	TRAV7	A0A075B6U4	112 aa		6.49	□□□□□ -1.37
TM9SF1-209	ENST00000530468	KRTAP12-2	P59991	146 aa		6.47	□□□□□ -1.37
TM9SF1-209	ENST00000530468	LCE1A	Q5T7P2	110 aa		6.46	□□□□□ -1.38
TM9SF1-209	ENST00000530468	KRTAP2-2	Q9BYT5	123 aa		6.46	□□□□□ -1.38
TM9SF1-209	ENST00000530468	KRTAP2-1	Q9BYU5	128 aa		6.46	□□□□□ -1.38
TM9SF1-209	ENST00000530468		R4GN34	69 aa		6.43	□□□□□ -1.38
TM9SF1-209	ENST00000530468	DMAC1	Q96GE9	116 aa		6.41	□□□□□ -1.38
TM9SF1-209	ENST00000530468	C20orf197	Q8N268	126 aa		6.4	□□□□□ -1.38
TM9SF1-209	ENST00000530468	ACYP2	P14621	99 aa		6.39	□□□□□ -1.39
TM9SF1-209	ENST00000530468	SPRR2D	P22532	72 aa		6.38	□□□□□ -1.39
TM9SF1-209	ENST00000530468	SPTSSB	Q8NFR3	76 aa		6.37	□□□□□ -1.39
TM9SF1-209	ENST00000530468		M0QZ58	72 aa		6.35	□□□□□ -1.39
TM9SF1-209	ENST00000530468		P0C880	135 aa		6.35	□□□□□ -1.39
TM9SF1-209	ENST00000530468	KRTAP4-8	A0A0G2JLE6	195 aa		6.33	□□□□□ -1.4
TM9SF1-209	ENST00000530468	KRTAP4-8	Q9BYQ9	185 aa		6.33	□□□□□ -1.4
TM9SF1-209	ENST00000530468	SERP2	Q8N6R1	65 aa		6.32	□□□□□ -1.4
TM9SF1-209	ENST00000530468	CHKB-CPT1B	H3BT56	60 aa		6.3	□□□□□ -1.4
TM9SF1-209	ENST00000530468	SNURF	Q9Y675	71 aa		6.29	□□□□□ -1.4
TM9SF1-209	ENST00000530468	LINC01554	Q52M75	96 aa		6.26	□□□□□ -1.41
TM9SF1-209	ENST00000530468	SPANXA2-OT1	Q8N9U9	137 aa		6.26	□□□□□ -1.41
TM9SF1-209	ENST00000530468	KRTAP3-2	Q9BYR7	98 aa		6.24	□□□□□ -1.41
TM9SF1-209	ENST00000530468	KRTAP10-7	P60409	375 aa	Predicted RBP	6.23	□□□□□ -1.41
TM9SF1-209	ENST00000530468	KRTAP10-12	P60413	245 aa		6.23	□□□□□ -1.41
TM9SF1-209	ENST00000530468	LCE3B	Q5TA77	95 aa		6.22	□□□□□ -1.41
TM9SF1-209	ENST00000530468	COX7C	P15954	63 aa		6.16	□□□□□ -1.42
TM9SF1-209	ENST00000530468	ANAPC13	Q9BS18	74 aa		6.06	□□□□□ -1.44
TM9SF1-209	ENST00000530468	SEC61G	P60059	68 aa		6.05	□□□□□ -1.44
TM9SF1-209	ENST00000530468	COA5	Q86WW8	74 aa		6.02	□□□□□ -1.45
TM9SF1-209	ENST00000530468	SERP1	Q9Y6X1	66 aa		6	□□□□□ -1.45
TM9SF1-209	ENST00000530468		H7BZZ5	65 aa		5.98	□□□□□ -1.45
TM9SF1-209	ENST00000530468	LCE5A	Q5TCM9	118 aa		5.89	□□□□□ -1.47
TM9SF1-209	ENST00000530468	ATP5E	P56381	51 aa	Predicted RBP	5.87	□□□□□ -1.47
TM9SF1-209	ENST00000530468	CAMK2N1	Q7Z7J9	78 aa		5.87	□□□□□ -1.47
TM9SF1-209	ENST00000530468	CYSTM1	Q9H1C7	97 aa		5.86	□□□□□ -1.47
TM9SF1-209	ENST00000530468	KRTAP19-7	Q3SYF9	63 aa		5.85	□□□□□ -1.47
TM9SF1-209	ENST00000530468	KRTAP19-3	Q7Z4W3	81 aa		5.85	□□□□□ -1.47
TM9SF1-209	ENST00000530468	KRTAP4-9	Q9BYQ8	210 aa		5.83	□□□□□ -1.48
TM9SF1-209	ENST00000530468	GPR98	Q8WXG9	6306 aa		5.82	□□□□□ -1.48
TM9SF1-209	ENST00000530468	CCDC179	H3BU77	68 aa		5.82	□□□□□ -1.48
TM9SF1-209	ENST00000530468	MT1E	P04732	61 aa		5.82	□□□□□ -1.48
TM9SF1-209	ENST00000530468		A0A1B0GU33	70 aa		5.81	□□□□□ -1.48
TM9SF1-209	ENST00000530468	KRTAP13-4	Q3LI77	160 aa		5.81	□□□□□ -1.48
TM9SF1-209	ENST00000530468	DST	Q03001	7570 aa	Known RBP	5.8	□□□□□ -1.48
TM9SF1-209	ENST00000530468		A0A1B0GU69	56 aa		5.8	□□□□□ -1.48
TM9SF1-209	ENST00000530468	PRR15L	Q9BU68	103 aa		5.75	□□□□□ -1.49
TM9SF1-209	ENST00000530468	TMEM258	P61165	79 aa		5.72	□□□□□ -1.49
TM9SF1-209	ENST00000530468	SMIM26	A0A096LP01	95 aa		5.71	□□□□□ -1.5
TM9SF1-209	ENST00000530468		A0A0D9SG42	100 aa		5.71	□□□□□ -1.5
TM9SF1-209	ENST00000530468	LCE1D	Q5T752	114 aa		5.69	□□□□□ -1.5
TM9SF1-209	ENST00000530468	SPATA8	Q6RVD6	105 aa		5.69	□□□□□ -1.5
TM9SF1-209	ENST00000530468	MT1G	P13640	62 aa		5.68	□□□□□ -1.5
TM9SF1-209	ENST00000530468	SPINT4	Q6UDR6	99 aa		5.67	□□□□□ -1.5
TM9SF1-209	ENST00000530468	PP632	Q6XCG6	107 aa		5.66	□□□□□ -1.5
TM9SF1-209	ENST00000530468	LCE4A	Q5TA78	99 aa		5.64	□□□□□ -1.51
TM9SF1-209	ENST00000530468	KRTAP19-5	Q3LI72	72 aa		5.63	□□□□□ -1.51
TM9SF1-209	ENST00000530468	MT4	P47944	62 aa		5.58	□□□□□ -1.52
TM9SF1-209	ENST00000530468	LINC01558	Q9Y6Z2	57 aa		5.58	□□□□□ -1.52
TM9SF1-209	ENST00000530468	MT1M	Q8N339	61 aa		5.56	□□□□□ -1.52
TM9SF1-209	ENST00000530468	HMCN1	Q96RW7	5635 aa		5.55	□□□□□ -1.52
TM9SF1-209	ENST00000530468	KRTAP12-1	P59990	96 aa		5.54	□□□□□ -1.52
TM9SF1-209	ENST00000530468	MT1L	Q93083	61 aa		5.52	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms