RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 BRK1Q8WUW1 75 aa7.78□□□□□ -1.16
CCDC90B-213ENST00000529611 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
CCDC90B-213ENST00000529611 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
CCDC90B-213ENST00000529611 LCA10Q71F78 164 aa7.75□□□□□ -1.17
CCDC90B-213ENST00000529611 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
CCDC90B-213ENST00000529611 H1FX-AS1Q4G0G2 97 aa7.74□□□□□ -1.17
CCDC90B-213ENST00000529611 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
CCDC90B-213ENST00000529611 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
CCDC90B-213ENST00000529611 S4R3F8 94 aa7.73□□□□□ -1.17
CCDC90B-213ENST00000529611 A6NED7 52 aa7.72□□□□□ -1.17
CCDC90B-213ENST00000529611 PRO0628Q9UI54 55 aa7.68□□□□□ -1.18
CCDC90B-213ENST00000529611 A8MU10 97 aa7.67□□□□□ -1.18
CCDC90B-213ENST00000529611 SEC61GP60059 68 aa7.67□□□□□ -1.18
CCDC90B-213ENST00000529611 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
CCDC90B-213ENST00000529611 MUC2Q02817 5179 aa7.58□□□□□ -1.2
CCDC90B-213ENST00000529611 UQCR11O14957 56 aa7.58□□□□□ -1.2
CCDC90B-213ENST00000529611 KRTAP19-2Q3LHN2 52 aa7.56□□□□□ -1.2
CCDC90B-213ENST00000529611 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
CCDC90B-213ENST00000529611 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
CCDC90B-213ENST00000529611 MIR22HGQ0VDD5 57 aa7.51□□□□□ -1.21
CCDC90B-213ENST00000529611 A0A1B0GU33 70 aa7.51□□□□□ -1.21
CCDC90B-213ENST00000529611 KRTAP10-6P60371 365 aaPredicted RBP7.51□□□□□ -1.21
CCDC90B-213ENST00000529611 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
CCDC90B-213ENST00000529611 H0YAA0 97 aa7.45□□□□□ -1.22
CCDC90B-213ENST00000529611 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
CCDC90B-213ENST00000529611 P0C880 135 aa7.43□□□□□ -1.22
CCDC90B-213ENST00000529611 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
CCDC90B-213ENST00000529611 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.22
CCDC90B-213ENST00000529611 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
CCDC90B-213ENST00000529611 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
CCDC90B-213ENST00000529611 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
CCDC90B-213ENST00000529611 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
CCDC90B-213ENST00000529611 A6NN06 94 aa7.29□□□□□ -1.24
CCDC90B-213ENST00000529611 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
CCDC90B-213ENST00000529611 A0A0D9SG42 100 aa7.2□□□□□ -1.26
CCDC90B-213ENST00000529611 M0QZ58 72 aa7.2□□□□□ -1.26
CCDC90B-213ENST00000529611 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-213ENST00000529611 MT1HP80294 61 aa7.14□□□□□ -1.27
CCDC90B-213ENST00000529611 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
CCDC90B-213ENST00000529611 R4GN34 69 aa7.13□□□□□ -1.27
CCDC90B-213ENST00000529611 K7ERS5 55 aa7.11□□□□□ -1.27
CCDC90B-213ENST00000529611 KTN1-AS1Q86SY8 53 aa7.09□□□□□ -1.27
CCDC90B-213ENST00000529611 M0R2T5 61 aa7.06□□□□□ -1.28
CCDC90B-213ENST00000529611 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
CCDC90B-213ENST00000529611 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
CCDC90B-213ENST00000529611 LINC01554Q52M75 96 aa7.04□□□□□ -1.28
CCDC90B-213ENST00000529611 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
CCDC90B-213ENST00000529611 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
CCDC90B-213ENST00000529611 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
CCDC90B-213ENST00000529611 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
CCDC90B-213ENST00000529611 MT2AP02795 61 aa6.89□□□□□ -1.31
CCDC90B-213ENST00000529611 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
CCDC90B-213ENST00000529611 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
CCDC90B-213ENST00000529611 ROMO1P60602 79 aa6.88□□□□□ -1.31
CCDC90B-213ENST00000529611 MT1FP04733 61 aa6.87□□□□□ -1.31
CCDC90B-213ENST00000529611 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.32
CCDC90B-213ENST00000529611 KRTAP10-10P60014 251 aa6.83□□□□□ -1.32
CCDC90B-213ENST00000529611 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
CCDC90B-213ENST00000529611 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
CCDC90B-213ENST00000529611 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
CCDC90B-213ENST00000529611 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
CCDC90B-213ENST00000529611 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
CCDC90B-213ENST00000529611 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
CCDC90B-213ENST00000529611 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
CCDC90B-213ENST00000529611 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
CCDC90B-213ENST00000529611 MT1BP07438 61 aa6.55□□□□□ -1.36
CCDC90B-213ENST00000529611 LCE2BO14633 110 aa6.45□□□□□ -1.38
CCDC90B-213ENST00000529611 TNP1P09430 55 aa6.4□□□□□ -1.39
CCDC90B-213ENST00000529611 MT1XP80297 61 aa6.37□□□□□ -1.39
CCDC90B-213ENST00000529611 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
CCDC90B-213ENST00000529611 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
CCDC90B-213ENST00000529611 USH2AO75445 5202 aa6.28□□□□□ -1.4
CCDC90B-213ENST00000529611 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
CCDC90B-213ENST00000529611 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
CCDC90B-213ENST00000529611 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
CCDC90B-213ENST00000529611 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
CCDC90B-213ENST00000529611 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
CCDC90B-213ENST00000529611 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
CCDC90B-213ENST00000529611 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
CCDC90B-213ENST00000529611 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
CCDC90B-213ENST00000529611 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
CCDC90B-213ENST00000529611 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
CCDC90B-213ENST00000529611 KMT2DO14686 5537 aa5.91□□□□□ -1.46
CCDC90B-213ENST00000529611 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
CCDC90B-213ENST00000529611 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
CCDC90B-213ENST00000529611 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
CCDC90B-213ENST00000529611 H3BS24 57 aa5.84□□□□□ -1.48
CCDC90B-213ENST00000529611 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
CCDC90B-213ENST00000529611 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CCDC90B-213ENST00000529611 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
CCDC90B-213ENST00000529611 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
CCDC90B-213ENST00000529611 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
CCDC90B-213ENST00000529611 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
CCDC90B-213ENST00000529611 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
CCDC90B-213ENST00000529611 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
CCDC90B-213ENST00000529611 MT1EP04732 61 aa5.56□□□□□ -1.52
CCDC90B-213ENST00000529611 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
CCDC90B-213ENST00000529611 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
CCDC90B-213ENST00000529611 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
CCDC90B-213ENST00000529611 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms