RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
TRAPPC4-209ENST00000528230 C5orf47Q569G3 176 aa5.63□□□□□ -1.51
TRAPPC4-209ENST00000528230 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
TRAPPC4-209ENST00000528230 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
TRAPPC4-209ENST00000528230 UQCRQO14949 82 aa5.62□□□□□ -1.51
TRAPPC4-209ENST00000528230 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
TRAPPC4-209ENST00000528230 LCA10Q71F78 164 aa5.6□□□□□ -1.51
TRAPPC4-209ENST00000528230 A0A1B0GV90 55 aa5.59□□□□□ -1.51
TRAPPC4-209ENST00000528230 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
TRAPPC4-209ENST00000528230 ATOX1O00244 68 aa5.58□□□□□ -1.52
TRAPPC4-209ENST00000528230 H0Y9P7 68 aa5.56□□□□□ -1.52
TRAPPC4-209ENST00000528230 A0A087WVE0 104 aa5.55□□□□□ -1.52
TRAPPC4-209ENST00000528230 FAM236AA0A1B0GUQ0 79 aa5.55□□□□□ -1.52
TRAPPC4-209ENST00000528230 FAM236BA0A1B0GV22 79 aa5.55□□□□□ -1.52
TRAPPC4-209ENST00000528230 J3QR89 54 aa5.52□□□□□ -1.53
TRAPPC4-209ENST00000528230 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC4-209ENST00000528230 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
TRAPPC4-209ENST00000528230 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
TRAPPC4-209ENST00000528230 A8MUN3 132 aa5.47□□□□□ -1.53
TRAPPC4-209ENST00000528230 MP68P56378 58 aa5.47□□□□□ -1.53
TRAPPC4-209ENST00000528230 KLKP1Q107X0 134 aa5.47□□□□□ -1.53
TRAPPC4-209ENST00000528230 LINC00208Q96KT6 92 aa5.47□□□□□ -1.53
TRAPPC4-209ENST00000528230 NDUFC1O43677 76 aa5.45□□□□□ -1.54
TRAPPC4-209ENST00000528230 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
TRAPPC4-209ENST00000528230 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
TRAPPC4-209ENST00000528230 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
TRAPPC4-209ENST00000528230 H3BPC8 53 aa5.42□□□□□ -1.54
TRAPPC4-209ENST00000528230 Q5VV11 94 aa5.42□□□□□ -1.54
TRAPPC4-209ENST00000528230 H0YAA0 97 aa5.41□□□□□ -1.54
TRAPPC4-209ENST00000528230 MT1BP07438 61 aa5.41□□□□□ -1.54
TRAPPC4-209ENST00000528230 SCGB1A1P11684 91 aa5.39□□□□□ -1.55
TRAPPC4-209ENST00000528230 A6NN06 94 aa5.34□□□□□ -1.55
TRAPPC4-209ENST00000528230 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
TRAPPC4-209ENST00000528230 K7ERU9 68 aa5.31□□□□□ -1.56
TRAPPC4-209ENST00000528230 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
TRAPPC4-209ENST00000528230 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
TRAPPC4-209ENST00000528230 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
TRAPPC4-209ENST00000528230 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
TRAPPC4-209ENST00000528230 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
TRAPPC4-209ENST00000528230 MT-ATP8P03928 68 aa5.27□□□□□ -1.57
TRAPPC4-209ENST00000528230 TRAV7A0A075B6U4 112 aa5.25□□□□□ -1.57
TRAPPC4-209ENST00000528230 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
TRAPPC4-209ENST00000528230 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
TRAPPC4-209ENST00000528230 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
TRAPPC4-209ENST00000528230 ACYP2P14621 99 aa5.21□□□□□ -1.58
TRAPPC4-209ENST00000528230 P0C880 135 aa5.18□□□□□ -1.58
TRAPPC4-209ENST00000528230 R4GN34 69 aa5.18□□□□□ -1.58
TRAPPC4-209ENST00000528230 SPTSSBQ8NFR3 76 aa5.15□□□□□ -1.59
TRAPPC4-209ENST00000528230 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
TRAPPC4-209ENST00000528230 M0QZ58 72 aa5.13□□□□□ -1.59
TRAPPC4-209ENST00000528230 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
TRAPPC4-209ENST00000528230 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
TRAPPC4-209ENST00000528230 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
TRAPPC4-209ENST00000528230 SPANXA2-OT1Q8N9U9 137 aa5.09□□□□□ -1.59
TRAPPC4-209ENST00000528230 CHKB-CPT1BH3BT56 60 aa5.08□□□□□ -1.6
TRAPPC4-209ENST00000528230 MT1XP80297 61 aa5.08□□□□□ -1.6
TRAPPC4-209ENST00000528230 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
TRAPPC4-209ENST00000528230 LINC01554Q52M75 96 aa5.03□□□□□ -1.6
TRAPPC4-209ENST00000528230 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
TRAPPC4-209ENST00000528230 NEBP20929 6669 aa4.94□□□□□ -1.62
TRAPPC4-209ENST00000528230 COX7CP15954 63 aa4.93□□□□□ -1.62
TRAPPC4-209ENST00000528230 COA5Q86WW8 74 aa4.91□□□□□ -1.62
TRAPPC4-209ENST00000528230 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
TRAPPC4-209ENST00000528230 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
TRAPPC4-209ENST00000528230 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
TRAPPC4-209ENST00000528230 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
TRAPPC4-209ENST00000528230 KMT2DO14686 5537 aa4.85□□□□□ -1.63
TRAPPC4-209ENST00000528230 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
TRAPPC4-209ENST00000528230 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
TRAPPC4-209ENST00000528230 H7BZZ5 65 aa4.84□□□□□ -1.63
TRAPPC4-209ENST00000528230 SEC61GP60059 68 aa4.84□□□□□ -1.63
TRAPPC4-209ENST00000528230 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC4-209ENST00000528230 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
TRAPPC4-209ENST00000528230 SPRR2EP22531 72 aa4.81□□□□□ -1.64
TRAPPC4-209ENST00000528230 SPRR2BP35325 72 aa4.81□□□□□ -1.64
TRAPPC4-209ENST00000528230 SPRR2AP35326 72 aa4.81□□□□□ -1.64
TRAPPC4-209ENST00000528230 CYSTM1Q9H1C7 97 aa4.8□□□□□ -1.64
TRAPPC4-209ENST00000528230 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
TRAPPC4-209ENST00000528230 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
TRAPPC4-209ENST00000528230 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
TRAPPC4-209ENST00000528230 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
TRAPPC4-209ENST00000528230 ANAPC13Q9BS18 74 aa4.76□□□□□ -1.65
TRAPPC4-209ENST00000528230 A0A1B0GU33 70 aa4.74□□□□□ -1.65
TRAPPC4-209ENST00000528230 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
TRAPPC4-209ENST00000528230 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
TRAPPC4-209ENST00000528230 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
TRAPPC4-209ENST00000528230 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
TRAPPC4-209ENST00000528230 A0A0D9SG42 100 aa4.7□□□□□ -1.66
TRAPPC4-209ENST00000528230 A0A1B0GU69 56 aa4.67□□□□□ -1.66
TRAPPC4-209ENST00000528230 SPRR2DP22532 72 aa4.66□□□□□ -1.66
TRAPPC4-209ENST00000528230 CCDC179H3BU77 68 aa4.65□□□□□ -1.67
TRAPPC4-209ENST00000528230 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
TRAPPC4-209ENST00000528230 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC4-209ENST00000528230 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
TRAPPC4-209ENST00000528230 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
TRAPPC4-209ENST00000528230 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
TRAPPC4-209ENST00000528230 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
TRAPPC4-209ENST00000528230 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
TRAPPC4-209ENST00000528230 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
TRAPPC4-209ENST00000528230 A8MU10 97 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms