RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KRTAP19-8Q3LI54 63 aa14.84□□□□□ -0.03
SSSCA1-205ENST00000527920 MT1BP07438 61 aa14.81□□□□□ -0.04
SSSCA1-205ENST00000527920 Q5VV11 94 aa14.81□□□□□ -0.04
SSSCA1-205ENST00000527920 A8MUN3 132 aa14.77□□□□□ -0.05
SSSCA1-205ENST00000527920 OCR1Q9BZK8 76 aa14.76□□□□□ -0.05
SSSCA1-205ENST00000527920 LINC00208Q96KT6 92 aa14.74□□□□□ -0.05
SSSCA1-205ENST00000527920 NDUFC1O43677 76 aa14.73□□□□□ -0.05
SSSCA1-205ENST00000527920 IMUPQ9GZP8 106 aa14.73□□□□□ -0.05
SSSCA1-205ENST00000527920 CRIPTQ9P021 101 aa14.73□□□□□ -0.05
SSSCA1-205ENST00000527920 MP68P56378 58 aa14.7□□□□□ -0.06
SSSCA1-205ENST00000527920 SYNE2Q8WXH0 6885 aaKnown RBP14.69□□□□□ -0.06
SSSCA1-205ENST00000527920 J3QR89 54 aa14.69□□□□□ -0.06
SSSCA1-205ENST00000527920 H0YAA0 97 aa14.67□□□□□ -0.06
SSSCA1-205ENST00000527920 A6NN06 94 aa14.62□□□□□ -0.07
SSSCA1-205ENST00000527920 KRTAP6-3Q3LI67 103 aa14.57□□□□□ -0.08
SSSCA1-205ENST00000527920 H3BPC8 53 aa14.55□□□□□ -0.08
SSSCA1-205ENST00000527920 KRTAP10-5P60370 271 aa14.49□□□□□ -0.09
SSSCA1-205ENST00000527920 SCGB1A1P11684 91 aa14.42□□□□□ -0.1
SSSCA1-205ENST00000527920 ADM2Q7Z4H4 148 aa14.4□□□□□ -0.1
SSSCA1-205ENST00000527920 DMAC1Q96GE9 116 aa14.34□□□□□ -0.11
SSSCA1-205ENST00000527920 C20orf197Q8N268 126 aa14.16□□□□□ -0.14
SSSCA1-205ENST00000527920 K7ERU9 68 aa14.12□□□□□ -0.15
SSSCA1-205ENST00000527920 MT-ATP8P03928 68 aa14.11□□□□□ -0.15
SSSCA1-205ENST00000527920 SMIM20Q8N5G0 67 aa14.11□□□□□ -0.15
SSSCA1-205ENST00000527920 P0C880 135 aa14.08□□□□□ -0.16
SSSCA1-205ENST00000527920 R4GN34 69 aa14.07□□□□□ -0.16
SSSCA1-205ENST00000527920 TRAV7A0A075B6U4 112 aa14.05□□□□□ -0.16
SSSCA1-205ENST00000527920 KRTAP3-2Q9BYR7 98 aa13.98□□□□□ -0.17
SSSCA1-205ENST00000527920 PRO2289Q9P1D8 64 aa13.98□□□□□ -0.17
SSSCA1-205ENST00000527920 ACYP2P14621 99 aa13.97□□□□□ -0.17
SSSCA1-205ENST00000527920 PLAC4Q8WY50 150 aa13.96□□□□□ -0.17
SSSCA1-205ENST00000527920 KRTAP5-9P26371 169 aa13.94□□□□□ -0.18
SSSCA1-205ENST00000527920 M0QZ58 72 aa13.92□□□□□ -0.18
SSSCA1-205ENST00000527920 MUC12Q9UKN1 5478 aa13.91□□□□□ -0.18
SSSCA1-205ENST00000527920 MT1XP80297 61 aa13.9□□□□□ -0.18
SSSCA1-205ENST00000527920 NEBP20929 6669 aa13.88□□□□□ -0.19
SSSCA1-205ENST00000527920 SPTSSBQ8NFR3 76 aa13.83□□□□□ -0.2
SSSCA1-205ENST00000527920 KMT2DO14686 5537 aa13.74□□□□□ -0.21
SSSCA1-205ENST00000527920 SNURFQ9Y675 71 aa13.7□□□□□ -0.22
SSSCA1-205ENST00000527920 LINC01554Q52M75 96 aa13.68□□□□□ -0.22
SSSCA1-205ENST00000527920 CHKB-CPT1BH3BT56 60 aa13.67□□□□□ -0.22
SSSCA1-205ENST00000527920 SPANXA2-OT1Q8N9U9 137 aa13.64□□□□□ -0.23
SSSCA1-205ENST00000527920 KRTAP12-2P59991 146 aa13.62□□□□□ -0.23
SSSCA1-205ENST00000527920 SERP2Q8N6R1 65 aa13.58□□□□□ -0.24
SSSCA1-205ENST00000527920 MDN1Q9NU22 5596 aa13.56□□□□□ -0.24
SSSCA1-205ENST00000527920 SPRR2FQ96RM1 72 aa13.45□□□□□ -0.26
SSSCA1-205ENST00000527920 KRTAP8-1Q8IUC2 63 aa13.44□□□□□ -0.26
SSSCA1-205ENST00000527920 KRTAP20-1Q3LI63 56 aa13.43□□□□□ -0.26
SSSCA1-205ENST00000527920 SPRR2EP22531 72 aa13.24□□□□□ -0.29
SSSCA1-205ENST00000527920 SPRR2BP35325 72 aa13.24□□□□□ -0.29
SSSCA1-205ENST00000527920 SPRR2AP35326 72 aa13.24□□□□□ -0.29
SSSCA1-205ENST00000527920 KRTAP10-12P60413 245 aa13.23□□□□□ -0.29
SSSCA1-205ENST00000527920 KRTAP4-8A0A0G2JLE6 195 aa13.22□□□□□ -0.29
SSSCA1-205ENST00000527920 KRTAP10-7P60409 375 aaPredicted RBP13.22□□□□□ -0.29
SSSCA1-205ENST00000527920 KRTAP4-8Q9BYQ9 185 aa13.22□□□□□ -0.29
SSSCA1-205ENST00000527920 COA5Q86WW8 74 aa13.19□□□□□ -0.3
SSSCA1-205ENST00000527920 KRTAP13-4Q3LI77 160 aa13.16□□□□□ -0.3
SSSCA1-205ENST00000527920 COX7CP15954 63 aa13.14□□□□□ -0.31
SSSCA1-205ENST00000527920 KRTAP2-3P0C7H8 128 aa13.12□□□□□ -0.31
SSSCA1-205ENST00000527920 LCE1AQ5T7P2 110 aa13.12□□□□□ -0.31
SSSCA1-205ENST00000527920 KRTAP2-4Q9BYR9 128 aa13.12□□□□□ -0.31
SSSCA1-205ENST00000527920 SEC61GP60059 68 aa12.98□□□□□ -0.33
SSSCA1-205ENST00000527920 H7BZZ5 65 aa12.96□□□□□ -0.33
SSSCA1-205ENST00000527920 SERP1Q9Y6X1 66 aa12.94□□□□□ -0.34
SSSCA1-205ENST00000527920 CAMK2N1Q7Z7J9 78 aa12.92□□□□□ -0.34
SSSCA1-205ENST00000527920 CYSTM1Q9H1C7 97 aa12.89□□□□□ -0.35
SSSCA1-205ENST00000527920 SPRR2DP22532 72 aa12.81□□□□□ -0.36
SSSCA1-205ENST00000527920 A0A1B0GU33 70 aa12.75□□□□□ -0.37
SSSCA1-205ENST00000527920 A0A0D9SG42 100 aa12.72□□□□□ -0.37
SSSCA1-205ENST00000527920 KRTAP2-2Q9BYT5 123 aa12.71□□□□□ -0.37
SSSCA1-205ENST00000527920 KRTAP2-1Q9BYU5 128 aa12.71□□□□□ -0.37
SSSCA1-205ENST00000527920 SPATA8Q6RVD6 105 aa12.7□□□□□ -0.38
SSSCA1-205ENST00000527920 ANAPC13Q9BS18 74 aa12.65□□□□□ -0.38
SSSCA1-205ENST00000527920 SPINT4Q6UDR6 99 aa12.54□□□□□ -0.4
SSSCA1-205ENST00000527920 A0A1B0GU69 56 aa12.52□□□□□ -0.41
SSSCA1-205ENST00000527920 KRTAP12-1P59990 96 aa12.52□□□□□ -0.41
SSSCA1-205ENST00000527920 LCE3BQ5TA77 95 aa12.46□□□□□ -0.41
SSSCA1-205ENST00000527920 SMIM26A0A096LP01 95 aa12.42□□□□□ -0.42
SSSCA1-205ENST00000527920 KRTAP19-7Q3SYF9 63 aa12.42□□□□□ -0.42
SSSCA1-205ENST00000527920 CCDC179H3BU77 68 aa12.37□□□□□ -0.43
SSSCA1-205ENST00000527920 ATP5EP56381 51 aaPredicted RBP12.34□□□□□ -0.43
SSSCA1-205ENST00000527920 MT1EP04732 61 aa12.32□□□□□ -0.44
SSSCA1-205ENST00000527920 LCE5AQ5TCM9 118 aa12.27□□□□□ -0.45
SSSCA1-205ENST00000527920 A8MU10 97 aa12.23□□□□□ -0.45
SSSCA1-205ENST00000527920 KRTAP19-3Q7Z4W3 81 aa12.22□□□□□ -0.45
SSSCA1-205ENST00000527920 PRR15LQ9BU68 103 aa12.18□□□□□ -0.46
SSSCA1-205ENST00000527920 KRTAP19-5Q3LI72 72 aa12.09□□□□□ -0.47
SSSCA1-205ENST00000527920 LINC01558Q9Y6Z2 57 aa12.07□□□□□ -0.48
SSSCA1-205ENST00000527920 TMEM258P61165 79 aa11.99□□□□□ -0.49
SSSCA1-205ENST00000527920 C10orf95Q9H7T3 257 aa11.96□□□□□ -0.49
SSSCA1-205ENST00000527920 TNP1P09430 55 aa11.95□□□□□ -0.5
SSSCA1-205ENST00000527920 MT1GP13640 62 aa11.95□□□□□ -0.5
SSSCA1-205ENST00000527920 DSTQ03001 7570 aaKnown RBP11.92□□□□□ -0.5
SSSCA1-205ENST00000527920 PP632Q6XCG6 107 aa11.86□□□□□ -0.51
SSSCA1-205ENST00000527920 LCE3AQ5TA76 89 aa11.83□□□□□ -0.52
SSSCA1-205ENST00000527920 UQCR11O14957 56 aa11.78□□□□□ -0.52
SSSCA1-205ENST00000527920 MT1LQ93083 61 aa11.78□□□□□ -0.52
SSSCA1-205ENST00000527920 MT1MQ8N339 61 aa11.71□□□□□ -0.53
SSSCA1-205ENST00000527920 KRTAP4-9Q9BYQ8 210 aa11.52□□□□□ -0.57
SSSCA1-205ENST00000527920 MIR22HGQ0VDD5 57 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms